Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
A01p28360 Brassica napus HOM05D001678 ORTHO05D001698 3.8e-114 414.8 210 100.0
BraA06t25821Z Brassica rapa HOM05D001678 ORTHO05D001698 1.6e-56 223.4 130 90.0
BcaB01g02681 Brassica carinata HOM05D001678 ORTHO05D001698 1.0e-42 177.6 130 71.5
BcaC06g34160 Brassica carinata HOM05D001678 ORTHO05D001698 6.2e-40 168.3 93 91.4
C07p32060 Brassica napus HOM05D001678 ORTHO05D001698 6.2e-40 168.3 100 87.0
A01p29830 Brassica napus HOM05D001678 ORTHO05D001698 2.0e-38 163.3 130 69.2
BraA01t03111Z Brassica rapa HOM05D001678 ORTHO05D001698 2.0e-38 163.3 130 69.2
BcaC07g37804 Brassica carinata HOM05D001678 ORTHO05D001698 6.5e-37 158.3 130 67.7
BolC8t48193H Brassica oleracea HOM05D001678 ORTHO05D001698 6.5e-37 158.3 130 67.7
C02p32520 Brassica napus HOM05D001678 ORTHO05D001698 1.4e-36 157.1 130 66.9
Carub.0007s0094 Capsella rubella HOM05D001678 ORTHO05D001698 2.4e-31 139.8 149 56.4
Carub.0006s2679 Capsella rubella HOM05D001678 ORTHO05D001698 4.5e-22 109.0 130 50.8
A04p22040 Brassica napus HOM05D001678 ORTHO05D001698 1.7e-21 107.1 58 89.7
C09p55800 Brassica napus HOM05D001678 ORTHO05D001698 1.7e-21 107.1 58 89.7
Carub.0002s1509 Capsella rubella HOM05D001678 ORTHO05D001698 1.4e-20 104.0 149 40.9
Carub.0007s2622 Capsella rubella HOM05D001678 ORTHO05D001698 1.4e-20 104.0 149 40.9
AL4G17900 Arabidopsis lyrata HOM05D001678 ORTHO05D001698 2.7e-19 99.8 105 57.1
AL4G17920 Arabidopsis lyrata HOM05D001678 ORTHO05D001698 2.7e-19 99.8 105 57.1
AL4G17660 Arabidopsis lyrata HOM05D001678 ORTHO05D001698 7.9e-19 98.2 104 56.7
BcaC03g17938 Brassica carinata HOM05D001678 ORTHO05D001698 1.8e-18 97.1 113 50.4
BcaC05g27161 Brassica carinata HOM05D001678 ORTHO05D001698 1.3e-16 90.9 100 52.0
BolC5t31786H Brassica oleracea HOM05D001678 ORTHO05D001698 1.3e-16 90.9 100 52.0
Carub.0006s2633 Capsella rubella HOM05D001678 ORTHO05D001698 2.8e-16 89.7 132 41.7
C05p30510 Brassica napus HOM05D001678 ORTHO05D032997 4.8e-16 89.0 119 46.2
Carub.0004s0707 Capsella rubella HOM05D001678 ORTHO05D001698 1.1e-15 87.8 110 50.9
C09p07340 Brassica napus HOM05D001678 ORTHO05D001698 4.1e-15 85.9 67 59.7
AT5G28820 Arabidopsis thaliana HOM05D001678 ORTHO05D001698 5.5e-12 75.5 79 57.0
A09p37990 Brassica napus HOM05D001678 ORTHO05D001698 7.2e-12 75.1 151 35.1
BraA09t39310Z Brassica rapa HOM05D001678 ORTHO05D001698 7.2e-12 75.1 151 35.1
BcaC09g49863 Brassica carinata HOM05D001678 ORTHO05D001698 1.2e-11 74.3 131 35.1
Thhalv10022272m.g Eutrema salsugineum HOM05D001678 ORTHO05D001698 2.1e-11 73.6 145 33.1
BcaC01g04115 Brassica carinata HOM05D001678 ORTHO05D001698 2.7e-11 73.2 133 36.8
BolC3t16754H Brassica oleracea HOM05D001678 ORTHO05D001698 2.7e-11 73.2 133 36.8
BraA01t03239Z Brassica rapa HOM05D001678 ORTHO05D001698 4.7e-11 72.4 133 35.3
AT2G29880 Arabidopsis thaliana HOM05D001678 ORTHO05D001698 1.0e-10 71.2 78 46.2
Thhalv10023821m.g Eutrema salsugineum HOM05D001678 ORTHO05D001698 6.7e-10 68.6 134 36.6
BcaB08g36227 Brassica carinata HOM05D001678 ORTHO05D001698 8.8e-10 68.2 57 54.4
Carub.0011s0001 Capsella rubella HOM05D001678 ORTHO05D001698 1.1e-09 67.8 172 30.2
A05p21020 Brassica napus HOM05D001678 ORTHO05D001698 1.5e-09 67.4 138 35.5
A08p16470 Brassica napus HOM05D001678 ORTHO05D001698 2.0e-09 67.0 138 35.5
Thhalv10029423m.g Eutrema salsugineum HOM05D001678 ORTHO05D001698 2.0e-09 67.0 134 35.1
BcaNung00414 Brassica carinata HOM05D001678 ORTHO05D001698 2.6e-09 66.6 122 37.7
Thhalv10005278m.g Eutrema salsugineum HOM05D001678 ORTHO05D001698 2.6e-09 66.6 145 33.1
BcaC04g21001 Brassica carinata HOM05D001678 ORTHO05D001698 3.3e-09 66.2 138 34.8
C09p36790 Brassica napus HOM05D001678 ORTHO05D001698 3.3e-09 66.2 138 34.8
AL1G56710 Arabidopsis lyrata HOM05D001678 ORTHO05D001698 4.4e-09 65.9 128 34.4
CARHR004570 Cardamine hirsuta HOM05D001678 ORTHO05D001698 7.4e-09 65.1 107 35.5
BolC3t20376H Brassica oleracea HOM05D001678 ORTHO05D001698 9.7e-09 64.7 133 33.8
BraA10t43304Z Brassica rapa HOM05D001678 ORTHO05D001698 9.7e-09 64.7 131 33.6
BraA04t16704Z Brassica rapa HOM05D001678 ORTHO05D001698 1.3e-08 64.3 126 36.5
BraA05t21006Z Brassica rapa HOM05D001678 ORTHO05D001698 1.3e-08 64.3 126 36.5
Carub.0006s3595 Capsella rubella HOM05D001678 ORTHO05D001698 1.7e-08 63.9 113 32.7
Carub.0008s1510 Capsella rubella HOM05D001678 ORTHO05D001698 1.7e-08 63.9 113 32.7
Thhalv10027019m.g Eutrema salsugineum HOM05D001678 ORTHO05D001698 2.2e-08 63.5 164 26.8
BolC3t21566H Brassica oleracea HOM05D001678 ORTHO05D001698 2.8e-08 63.2 113 35.4
BolC9t56511H Brassica oleracea HOM05D001678 ORTHO05D001698 2.8e-08 63.2 126 35.7
A10p12020 Brassica napus HOM05D001678 ORTHO05D001698 3.7e-08 62.8 119 34.5
Carub.0001s3536 Capsella rubella HOM05D001678 ORTHO05D001698 6.3e-08 62.0 89 39.3
C01p41560 Brassica napus HOM05D000592 ORTHO05D001485 3.1e-07 59.7 49 57.1
BolC1t04110H Brassica oleracea HOM05D000592 ORTHO05D001485 3.1e-07 59.7 49 57.1
Oeu039328.1 Olea europaea HOM05D001678 ORTHO05D001698 3.1e-07 59.7 108 36.1
Prupe.1G229800 Prunus persica HOM05D001678 ORTHO05D001698 5.3e-07 58.9 104 38.5
Thhalv10029159m.g Eutrema salsugineum HOM05D001678 ORTHO05D001698 7.0e-07 58.5 142 30.3
Sp6g02750 Schrenkiella parvula HOM05D001678 ORTHO05D001698 1.5e-06 57.4 162 32.1
AL1G65820 Arabidopsis lyrata HOM05D001678 ORTHO05D001698 2.0e-06 57.0 107 34.6
A01p32430 Brassica napus HOM05D000592 ORTHO05D001485 4.5e-06 55.8 49 53.1
BraA01t03373Z Brassica rapa HOM05D000592 ORTHO05D001485 4.5e-06 55.8 49 53.1
Prupe.6G020000 Prunus persica HOM05D001678 ORTHO05D001698 7.7e-06 55.1 107 33.6


User provided reference genes

Program Settings