Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
A01p27760 Brassica napus HOM05D001285 ORTHO05D000199 1.2e-46 189.5 93 100.0
C09p55130 Brassica napus HOM05D001285 ORTHO05D000199 5.0e-42 174.1 93 93.5
C06p26050 Brassica napus HOM05D001285 ORTHO05D000199 1.1e-41 172.9 93 93.5
C08p11380 Brassica napus HOM05D001285 ORTHO05D000199 2.1e-40 168.7 93 90.3
C03p64080 Brassica napus HOM05D001285 ORTHO05D000199 4.7e-40 167.5 93 89.2
C05p22020 Brassica napus HOM05D001285 ORTHO05D000199 1.8e-39 165.6 85 95.3
A05p21700 Brassica napus HOM05D001285 ORTHO05D000199 9.8e-38 159.8 86 87.2
BolC2t08562H Brassica oleracea HOM05D004489 ORTHO05D010056 1.7e-34 149.1 93 80.6
C07p23590 Brassica napus HOM05D001285 ORTHO05D000199 5.0e-34 147.5 93 77.4
C09p20890 Brassica napus HOM05D001285 ORTHO05D000199 2.5e-33 145.2 93 77.4
BolC7t42863H Brassica oleracea HOM05D004489 ORTHO05D010056 1.4e-28 129.4 91 72.5
C09p23470 Brassica napus HOM05D001285 ORTHO05D000199 3.2e-28 128.3 76 78.9
C06p12830 Brassica napus HOM05D001285 ORTHO05D000199 5.4e-28 127.5 76 78.9
C07p01860 Brassica napus HOM05D004489 ORTHO05D010056 1.2e-27 126.3 91 71.4
C05p42600 Brassica napus HOM05D004489 ORTHO05D000199 6.0e-27 124.0 75 78.7
C01p12180 Brassica napus HOM05D004489 ORTHO05D000199 7.8e-27 123.6 76 77.6
BcaB02g07816 Brassica carinata HOM05D001285 ORTHO05D000199 2.3e-26 122.1 88 64.8
C08p09430 Brassica napus HOM05D004489 ORTHO05D000199 2.3e-26 122.1 68 83.8
BraA01t02913Z Brassica rapa HOM05D004489 ORTHO05D021897 6.6e-26 120.6 60 95.0
Carub.0006s2832 Capsella rubella HOM05D001285 ORTHO05D000199 5.2e-23 110.9 83 62.7
Carub.0004s0683 Capsella rubella HOM05D001285 ORTHO05D000199 1.5e-22 109.4 80 65.0
C06p25970 Brassica napus HOM05D004489 ORTHO05D021897 6.6e-18 94.0 46 100.0
CARHR104030 Cardamine hirsuta HOM05D001285 ORTHO05D000199 8.6e-18 93.6 80 57.5
C08p18050 Brassica napus HOM05D004489 ORTHO05D021897 1.9e-17 92.4 46 97.8
BolC8t49437H Brassica oleracea HOM05D004489 ORTHO05D021897 1.9e-17 92.4 46 97.8
C09p39590 Brassica napus HOM05D004489 ORTHO05D010056 1.2e-16 89.7 46 95.7
C03p69080 Brassica napus HOM05D004489 ORTHO05D000199 2.8e-16 88.6 47 85.1
C07p19330 Brassica napus HOM05D004489 ORTHO05D021897 2.8e-16 88.6 46 93.5
BraA05t20715Z Brassica rapa HOM05D001285 ORTHO05D000199 1.1e-15 86.7 80 55.0
BcaC06g30937 Brassica carinata HOM05D001285 ORTHO05D000199 1.8e-15 85.9 80 55.0
BcaB03g15573 Brassica carinata HOM05D001285 ORTHO05D000199 2.4e-15 85.5 80 55.0
BraA06t25595Z Brassica rapa HOM05D001285 ORTHO05D000199 3.1e-15 85.1 80 53.8
BcaNung03065 Brassica carinata HOM05D001285 ORTHO05D000199 4.0e-15 84.7 77 50.6
BraA09t38468Z Brassica rapa HOM05D001285 ORTHO05D000199 6.8e-15 84.0 77 50.6
BcaC05g27865 Brassica carinata HOM05D001285 ORTHO05D000199 1.2e-14 83.2 77 49.4
C05p38640 Brassica napus HOM05D001285 ORTHO05D000199 1.2e-14 83.2 77 49.4
BolC4t23605H Brassica oleracea HOM05D001285 ORTHO05D000199 1.2e-14 83.2 88 46.6
BolC5t32603H Brassica oleracea HOM05D001285 ORTHO05D021957 1.2e-14 83.2 77 49.4
BcaC05g27108 Brassica carinata HOM05D001285 ORTHO05D000199 1.5e-14 82.8 80 52.5
C03p03120 Brassica napus HOM05D001285 ORTHO05D000199 1.5e-14 82.8 82 46.3
C06p15920 Brassica napus HOM05D001285 ORTHO05D000199 4.4e-14 81.3 80 45.0
AL1G51180 Arabidopsis lyrata HOM05D001285 ORTHO05D000199 5.8e-14 80.9 80 45.0
Thhalv10002866m.g Eutrema salsugineum HOM05D001285 ORTHO05D000199 5.8e-14 80.9 80 45.0
Carub.0005s0342 Capsella rubella HOM05D001285 ORTHO05D000199 7.6e-14 80.5 81 48.1
AL3G30210 Arabidopsis lyrata HOM05D001285 ORTHO05D000199 9.9e-14 80.1 80 45.0
BcaC08g44187 Brassica carinata HOM05D001285 ORTHO05D000199 2.2e-13 79.0 80 43.8
AT5G45570 Arabidopsis thaliana HOM05D001285 ORTHO05D000199 3.8e-13 78.2 82 46.3
A02p21060 Brassica napus HOM05D001285 ORTHO05D000199 3.8e-13 78.2 71 54.9
A09p31280 Brassica napus HOM05D001285 ORTHO05D000199 3.8e-13 78.2 71 54.9
BcaC02g11078 Brassica carinata HOM05D001285 ORTHO05D000199 4.9e-13 77.8 88 44.3
BraA03t11415Z Brassica rapa HOM05D001285 ORTHO05D000199 4.9e-13 77.8 80 46.2
BraA07t28518Z Brassica rapa HOM05D001285 ORTHO05D000199 4.9e-13 77.8 80 46.2
BolC2t07252H Brassica oleracea HOM05D001285 ORTHO05D000199 6.4e-13 77.4 80 46.2
BraA01t02157Z Brassica rapa HOM05D001285 ORTHO05D000199 6.4e-13 77.4 80 46.2
Carub.0006s2659 Capsella rubella HOM05D001285 ORTHO05D000199 1.9e-12 75.9 57 50.9
Carub.0027s0004 Capsella rubella HOM05D001285 ORTHO05D000199 2.4e-12 75.5 91 44.0
AL3G40680 Arabidopsis lyrata HOM05D001285 ORTHO05D000199 3.2e-12 75.1 82 43.9
AL1G60090 Arabidopsis lyrata HOM05D001285 ORTHO05D000199 4.2e-12 74.7 80 41.2
A02p26990 Brassica napus HOM05D001285 ORTHO05D000199 4.2e-12 74.7 80 51.2
Carub.0004s0691 Capsella rubella HOM05D001285 ORTHO05D000199 4.2e-12 74.7 90 44.4
Thhalv10015545m.g Eutrema salsugineum HOM05D001285 ORTHO05D000199 4.2e-12 74.7 82 48.8
BcaC04g20925 Brassica carinata HOM05D001285 ORTHO05D000199 5.4e-12 74.3 80 45.0
Thhalv10009813m.g Eutrema salsugineum HOM05D001285 ORTHO05D000199 7.1e-12 73.9 82 48.8
BcaC07g38661 Brassica carinata HOM05D001285 ORTHO05D000199 9.3e-12 73.6 84 44.0
C02p49790 Brassica napus HOM05D001285 ORTHO05D000199 9.3e-12 73.6 84 44.0
AL3G45900 Arabidopsis lyrata HOM05D001285 ORTHO05D000199 1.2e-11 73.2 81 43.2
AL8G24550 Arabidopsis lyrata HOM05D001285 ORTHO05D000199 1.2e-11 73.2 80 45.0
BcaC07g41747 Brassica carinata HOM05D001285 ORTHO05D000199 1.2e-11 73.2 80 45.0
Carub.0003s3058 Capsella rubella HOM05D001285 ORTHO05D000199 1.2e-11 73.2 81 40.7
AT4G08430 Arabidopsis thaliana HOM05D001285 ORTHO05D000199 2.1e-11 72.4 82 43.9
Thhalv10002320m.g Eutrema salsugineum HOM05D001285 ORTHO05D000199 2.7e-11 72.0 80 41.2
A02p36790 Brassica napus HOM05D001285 ORTHO05D000199 3.5e-11 71.6 85 44.7
C09p65970 Brassica napus HOM05D001285 ORTHO05D000199 3.5e-11 71.6 85 44.7
BolC9t59420H Brassica oleracea HOM05D001285 ORTHO05D000199 3.5e-11 71.6 85 44.7
BraA02t08671Z Brassica rapa HOM05D001285 ORTHO05D000199 3.5e-11 71.6 85 44.7
AL5G16910 Arabidopsis lyrata HOM05D001285 ORTHO05D000199 4.6e-11 71.2 82 40.2
AL6G40760 Arabidopsis lyrata HOM05D001285 ORTHO05D000199 4.6e-11 71.2 85 41.2
Carub.0008s0707 Capsella rubella HOM05D001285 ORTHO05D000199 1.7e-10 69.3 91 40.7
AL4G20190 Arabidopsis lyrata HOM05D001285 ORTHO05D000199 2.3e-10 68.9 82 40.2
AL6G42160 Arabidopsis lyrata HOM05D001285 ORTHO05D000199 2.3e-10 68.9 80 40.0
BcaB03g15494 Brassica carinata HOM05D001285 ORTHO05D000199 2.3e-10 68.9 80 43.8
BcaB01g00219 Brassica carinata HOM05D001285 ORTHO05D000199 3.9e-10 68.2 80 43.8
CARHR260230 Cardamine hirsuta HOM05D001285 ORTHO05D000199 5.1e-10 67.8 48 58.3
AL3G44710 Arabidopsis lyrata HOM05D001285 ORTHO05D000199 6.6e-10 67.4 48 52.1
BcaC05g25966 Brassica carinata HOM05D001285 ORTHO05D000199 6.6e-10 67.4 56 53.6
C01p48530 Brassica napus HOM05D001285 ORTHO05D000199 8.7e-10 67.0 80 42.5
AL1G65960 Arabidopsis lyrata HOM05D001285 ORTHO05D000199 1.5e-09 66.2 81 39.5
BcaB06g28698 Brassica carinata HOM05D001285 ORTHO05D000199 1.5e-09 66.2 79 43.0
A06p22000 Brassica napus HOM05D001285 ORTHO05D000199 2.5e-09 65.5 80 38.8
BcaC03g14913 Brassica carinata HOM05D001285 ORTHO05D000199 3.3e-09 65.1 80 38.8
C02p23920 Brassica napus HOM05D001285 ORTHO05D000199 3.3e-09 65.1 80 38.8
Thhalv10005449m.g Eutrema salsugineum HOM05D001285 ORTHO05D000199 3.3e-09 65.1 48 56.2
BcaC03g17776 Brassica carinata HOM05D001285 ORTHO05D000199 4.3e-09 64.7 82 41.5
A10p12140 Brassica napus HOM05D001285 ORTHO05D000199 4.3e-09 64.7 80 38.8
CARHR032540 Cardamine hirsuta HOM05D001285 ORTHO05D021957 4.3e-09 64.7 55 50.9
Thhalv10005571m.g Eutrema salsugineum HOM05D001285 ORTHO05D000199 4.3e-09 64.7 65 53.8
AL4G17640 Arabidopsis lyrata HOM05D001285 ORTHO05D000199 5.6e-09 64.3 55 45.5
C01p17430 Brassica napus HOM05D001285 ORTHO05D000199 5.6e-09 64.3 62 53.2
BolC2t11860H Brassica oleracea HOM05D001285 ORTHO05D000199 5.6e-09 64.3 82 41.5
BraA05t21432Z Brassica rapa HOM05D001285 ORTHO05D000199 5.6e-09 64.3 80 38.8
CARHR185190 Cardamine hirsuta HOM05D001285 ORTHO05D000199 5.6e-09 64.3 80 43.8
BolC3t17402H Brassica oleracea HOM05D001285 ORTHO05D000199 9.6e-09 63.5 47 61.7
BcaC08g43423 Brassica carinata HOM05D001285 ORTHO05D000199 1.3e-08 63.2 80 41.2
BolC1t02405H Brassica oleracea HOM05D001285 ORTHO05D000199 1.3e-08 63.2 80 38.8
BolC6t35851H Brassica oleracea HOM05D001285 ORTHO05D000199 1.3e-08 63.2 80 41.2
Thhalv10015694m.g Eutrema salsugineum HOM05D000471 ORTHO05D000199 1.3e-08 63.2 85 37.6
AT1G37020 Arabidopsis thaliana HOM05D001285 ORTHO05D000199 2.1e-08 62.4 85 36.5
Thhalv10002270m.g Eutrema salsugineum HOM05D001285 ORTHO05D000199 2.1e-08 62.4 61 49.2
C02p57920 Brassica napus HOM05D001285 ORTHO05D000199 2.8e-08 62.0 80 37.5
CARHR289190 Cardamine hirsuta HOM05D001285 ORTHO05D000199 2.8e-08 62.0 55 50.9
BcaC05g30530 Brassica carinata HOM05D001285 ORTHO05D000199 3.6e-08 61.6 42 57.1
BcaC05g25804 Brassica carinata HOM05D000471 ORTHO05D000199 4.8e-08 61.2 82 41.5
A10p10700 Brassica napus HOM05D001285 ORTHO05D000199 4.8e-08 61.2 80 37.5
BolC5t30444H Brassica oleracea HOM05D000471 ORTHO05D010016 4.8e-08 61.2 82 41.5
C02p29930 Brassica napus HOM05D001285 ORTHO05D000199 6.2e-08 60.8 63 46.0
Thhalv10000500m.g Eutrema salsugineum HOM05D000471 ORTHO05D000199 6.2e-08 60.8 91 40.7
BolC9t55617H Brassica oleracea HOM05D000471 ORTHO05D000199 8.1e-08 60.5 94 36.2
C03p67770 Brassica napus HOM05D000471 ORTHO05D000199 1.1e-07 60.1 94 36.2
CARHR153270 Cardamine hirsuta HOM05D001285 ORTHO05D000199 1.4e-07 59.7 57 43.9
BolC8t47821H Brassica oleracea HOM05D000977 ORTHO05D001094 3.1e-07 58.5 79 35.4
CARHR116190 Cardamine hirsuta HOM05D001285 ORTHO05D000199 3.1e-07 58.5 57 45.6
BolSC21t60244H Brassica oleracea HOM05D000471 ORTHO05D000199 4.0e-07 58.2 94 35.1
BraA09t37769Z Brassica rapa HOM05D001285 ORTHO05D000199 4.0e-07 58.2 57 45.6
A04p14250 Brassica napus HOM05D000977 ORTHO05D001094 5.3e-07 57.8 78 38.5
BraA03t15188Z Brassica rapa HOM05D000977 ORTHO05D001094 5.3e-07 57.8 78 38.5
BcaB03g16512 Brassica carinata HOM05D000977 ORTHO05D001094 6.9e-07 57.4 80 36.2
C04p21620 Brassica napus HOM05D000977 ORTHO05D001094 6.9e-07 57.4 62 43.5
C04p44910 Brassica napus HOM05D000977 ORTHO05D001094 6.9e-07 57.4 77 39.0
BolC9t56792H Brassica oleracea HOM05D010384 ORTHO05D021981 6.9e-07 57.4 56 44.6
Thhalv10002307m.g Eutrema salsugineum HOM05D000471 ORTHO05D000199 6.9e-07 57.4 82 42.7
C09p27420 Brassica napus HOM05D000471 ORTHO05D000199 9.0e-07 57.0 94 35.1
C09p39140 Brassica napus HOM05D010384 ORTHO05D013516 9.0e-07 57.0 56 44.6
BolC9t56793H Brassica oleracea HOM05D010384 ORTHO05D013516 9.0e-07 57.0 56 44.6
BolC9t57495H Brassica oleracea HOM05D000977 ORTHO05D001094 9.0e-07 57.0 62 43.5
Carub.0003s2819 Capsella rubella HOM05D000471 ORTHO05D000199 9.0e-07 57.0 85 37.6
BcaC02g09936 Brassica carinata HOM05D000977 ORTHO05D001094 1.2e-06 56.6 79 35.4
C09p43120 Brassica napus HOM05D000977 ORTHO05D001094 1.2e-06 56.6 78 38.5
BolC9t57183H Brassica oleracea HOM05D000977 ORTHO05D001094 1.2e-06 56.6 78 38.5
BcaC04g22378 Brassica carinata HOM05D000977 ORTHO05D001094 1.5e-06 56.2 71 42.3
BolC9t55268H Brassica oleracea HOM05D004489 ORTHO05D010056 1.5e-06 56.2 26 92.3
Thhalv10012223m.g Eutrema salsugineum HOM05D000471 ORTHO05D000199 1.5e-06 56.2 84 40.5
C03p36960 Brassica napus HOM05D001285 ORTHO05D000199 2.0e-06 55.8 42 52.4
C03p37020 Brassica napus HOM05D001285 ORTHO05D000199 2.0e-06 55.8 42 52.4
BolC9t55313H Brassica oleracea HOM05D000471 ORTHO05D000199 2.0e-06 55.8 82 39.0
BolC9t58247H Brassica oleracea HOM05D000977 ORTHO05D001094 2.0e-06 55.8 62 43.5
Thhalv10017847m.g Eutrema salsugineum HOM05D000471 ORTHO05D000199 2.0e-06 55.8 51 52.9
BcaC02g09888 Brassica carinata HOM05D000977 ORTHO05D001094 2.6e-06 55.5 62 41.9
BolC4t25104H Brassica oleracea HOM05D000977 ORTHO05D001094 2.6e-06 55.5 62 41.9
BolC6t36479H Brassica oleracea HOM05D000977 ORTHO05D001094 2.6e-06 55.5 73 35.6
Thhalv10012192m.g Eutrema salsugineum HOM05D000471 ORTHO05D000199 2.6e-06 55.5 51 52.9
Thhalv10029454m.g Eutrema salsugineum HOM05D000471 ORTHO05D000199 2.6e-06 55.5 91 38.5
BcaB07g33549 Brassica carinata HOM05D000977 ORTHO05D001094 3.4e-06 55.1 94 31.9
BcaC01g02182 Brassica carinata HOM05D000977 ORTHO05D001094 3.4e-06 55.1 78 37.2
BcaC08g43667 Brassica carinata HOM05D000977 ORTHO05D001094 3.4e-06 55.1 62 43.5
C04p39280 Brassica napus HOM05D000471 ORTHO05D000199 3.4e-06 55.1 82 39.0
C06p10910 Brassica napus HOM05D000977 ORTHO05D001094 3.4e-06 55.1 62 43.5
C06p24190 Brassica napus HOM05D001285 ORTHO05D000199 3.4e-06 55.1 79 34.2
BolC6t36171H Brassica oleracea HOM05D000977 ORTHO05D001094 3.4e-06 55.1 62 43.5
BolSC21t60291H Brassica oleracea HOM05D000977 ORTHO05D001094 3.4e-06 55.1 78 37.2
Thhalv10029306m.g Eutrema salsugineum HOM05D000471 ORTHO05D000199 3.4e-06 55.1 51 51.0
BcaC01g02097 Brassica carinata HOM05D001285 ORTHO05D039944 4.4e-06 54.7 77 40.3
BcaC04g20474 Brassica carinata HOM05D000977 ORTHO05D001094 4.4e-06 54.7 78 37.2
C01p37340 Brassica napus HOM05D000977 ORTHO05D001094 4.4e-06 54.7 62 41.9
C03p68510 Brassica napus HOM05D001285 ORTHO05D039944 4.4e-06 54.7 77 40.3
Thhalv10001218m.g Eutrema salsugineum HOM05D000471 ORTHO05D000199 4.4e-06 54.7 84 39.3
BcaB01g02646 Brassica carinata HOM05D000977 ORTHO05D001094 5.8e-06 54.3 58 43.1
BcaB02g11283 Brassica carinata HOM05D001285 ORTHO05D000199 5.8e-06 54.3 66 40.9
BcaB06g28518 Brassica carinata HOM05D000977 ORTHO05D001094 5.8e-06 54.3 71 38.0
A05p29030 Brassica napus HOM05D000471 ORTHO05D000199 5.8e-06 54.3 82 39.0
A07p12530 Brassica napus HOM05D000471 ORTHO05D000199 5.8e-06 54.3 82 39.0
C09p20800 Brassica napus HOM05D000471 ORTHO05D000199 5.8e-06 54.3 82 39.0
BolC9t54976H Brassica oleracea HOM05D000471 ORTHO05D000199 5.8e-06 54.3 82 39.0
BraA05t20103Z Brassica rapa HOM05D000471 ORTHO05D000199 5.8e-06 54.3 82 39.0
BraA08t33333Z Brassica rapa HOM05D000471 ORTHO05D000199 5.8e-06 54.3 82 39.0
BraA09t38317Z Brassica rapa HOM05D000471 ORTHO05D000199 5.8e-06 54.3 82 39.0
Thhalv10012293m.g Eutrema salsugineum HOM05D000471 ORTHO05D000199 5.8e-06 54.3 51 51.0
Thhalv10022967m.g Eutrema salsugineum HOM05D000471 ORTHO05D000199 5.8e-06 54.3 51 52.9
Thhalv10026990m.g Eutrema salsugineum HOM05D000471 ORTHO05D000199 5.8e-06 54.3 62 45.2
Thhalv10028191m.g Eutrema salsugineum HOM05D000471 ORTHO05D000199 5.8e-06 54.3 51 52.9
BcaB04g17837 Brassica carinata HOM05D000977 ORTHO05D001094 7.6e-06 53.9 80 33.8
BolC7t41538H Brassica oleracea HOM05D000977 ORTHO05D001094 7.6e-06 53.9 79 34.2
BolC8t47761H Brassica oleracea HOM05D000471 ORTHO05D000199 7.6e-06 53.9 59 44.1
Thhalv10019787m.g Eutrema salsugineum HOM05D000471 ORTHO05D000199 7.6e-06 53.9 84 39.3
Aa31LG6G7610 Aethionema arabicum HOM05D001285 ORTHO05D000199 9.9e-06 53.5 82 36.6
Aa31sc206G20 Aethionema arabicum HOM05D000471 ORTHO05D000199 9.9e-06 53.5 82 36.6
C07p10720 Brassica napus HOM05D000977 ORTHO05D001094 9.9e-06 53.5 79 34.2
CARHR034730 Cardamine hirsuta HOM05D001285 ORTHO05D000199 9.9e-06 53.5 52 44.2
Thhalv10005672m.g Eutrema salsugineum HOM05D000471 ORTHO05D000199 9.9e-06 53.5 60 46.7
Thhalv10011096m.g Eutrema salsugineum HOM05D001285 ORTHO05D000199 9.9e-06 53.5 80 37.5
Thhalv10019524m.g Eutrema salsugineum HOM05D000471 ORTHO05D000199 9.9e-06 53.5 51 49.0
Thhalv10021955m.g Eutrema salsugineum HOM05D001285 ORTHO05D000199 9.9e-06 53.5 80 37.5


User provided reference genes

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