Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
A01p25970 Brassica napus HOM05D001038 ORTHO05D027789 3.2e-113 411.8 206 100.0
BraA01t02516Z Brassica rapa HOM05D001038 ORTHO05D027789 2.2e-98 362.5 199 94.0
BcaB05g25087 Brassica carinata HOM05D001038 ORTHO05D000395 4.0e-47 192.2 140 72.1
BcaB06g26982 Brassica carinata HOM05D001038 ORTHO05D000395 1.3e-45 187.2 140 71.4
BcaB03g12379 Brassica carinata HOM05D001038 ORTHO05D000395 1.9e-41 173.3 138 69.6
BraA02t06493Z Brassica rapa HOM05D001038 ORTHO05D000395 9.4e-41 171.0 150 60.7
BcaC08g46980 Brassica carinata HOM05D001038 ORTHO05D000395 2.1e-40 169.9 160 56.9
BraA05t20300Z Brassica rapa HOM05D001038 ORTHO05D000395 6.1e-40 168.3 157 57.3
C06p03930 Brassica napus HOM05D001038 ORTHO05D000395 8.8e-39 164.5 140 63.6
BcaB03g15871 Brassica carinata HOM05D001038 ORTHO05D027789 1.1e-36 157.5 140 60.0
C09p35780 Brassica napus HOM05D001038 ORTHO05D000395 2.7e-35 152.9 141 61.0
BolC9t56412H Brassica oleracea HOM05D001038 ORTHO05D000395 2.7e-35 152.9 141 61.0
C02p52080 Brassica napus HOM05D001038 ORTHO05D019962 3.5e-35 152.5 175 50.9
BolC2t11293H Brassica oleracea HOM05D001038 ORTHO05D019962 3.5e-35 152.5 175 50.9
BcaC04g21093 Brassica carinata HOM05D001038 ORTHO05D000395 4.5e-35 152.1 140 61.4
A09p28390 Brassica napus HOM05D001038 ORTHO05D000395 7.7e-35 151.4 146 56.2
BcaB01g01915 Brassica carinata HOM05D001038 ORTHO05D000395 3.8e-34 149.1 137 58.4
BcaB08g34782 Brassica carinata HOM05D001038 ORTHO05D000395 6.5e-34 148.3 140 57.1
BolC7t42043H Brassica oleracea HOM05D001038 ORTHO05D000395 8.6e-34 147.9 149 58.4
BolC3t18949H Brassica oleracea HOM05D001038 ORTHO05D000395 1.1e-33 147.5 140 55.7
BraA02t08907Z Brassica rapa HOM05D001038 ORTHO05D000395 3.3e-33 146.0 124 65.3
BcaB01g00832 Brassica carinata HOM05D001038 ORTHO05D000395 9.5e-33 144.4 160 50.6
A04p11380 Brassica napus HOM05D001038 ORTHO05D000395 2.1e-32 143.3 124 63.7
BraA04t16800Z Brassica rapa HOM05D001038 ORTHO05D000395 2.1e-32 143.3 124 63.7
BcaC05g25823 Brassica carinata HOM05D001038 ORTHO05D014932 4.7e-32 142.1 149 53.7
A01p24490 Brassica napus HOM05D001038 ORTHO05D021947 6.1e-32 141.7 146 54.8
C09p52160 Brassica napus HOM05D001038 ORTHO05D000395 6.1e-32 141.7 152 51.3
BolC9t58082H Brassica oleracea HOM05D001038 ORTHO05D000395 6.1e-32 141.7 152 51.3
A01p01820 Brassica napus HOM05D001038 ORTHO05D000395 8.0e-32 141.4 146 52.1
BcaC04g20563 Brassica carinata HOM05D001038 ORTHO05D021947 1.4e-31 140.6 146 54.8
C07p15560 Brassica napus HOM05D001038 ORTHO05D000395 1.4e-31 140.6 149 55.7
BcaC03g17929 Brassica carinata HOM05D001038 ORTHO05D000395 3.0e-31 139.4 140 55.7
C09p42070 Brassica napus HOM05D001038 ORTHO05D021947 2.0e-30 136.7 146 54.1
C01p11550 Brassica napus HOM05D001038 ORTHO05D040626 2.6e-30 136.3 149 51.7
BcaB03g16260 Brassica carinata HOM05D001038 ORTHO05D019962 4.4e-30 135.6 144 54.2
A01p23200 Brassica napus HOM05D001038 ORTHO05D000395 8.3e-29 131.3 138 55.1
BcaB01g01303 Brassica carinata HOM05D001038 ORTHO05D000395 1.1e-28 131.0 140 55.7
BcaB02g10843 Brassica carinata HOM05D001038 ORTHO05D000395 1.8e-28 130.2 140 55.0
BcaB08g34565 Brassica carinata HOM05D001038 ORTHO05D000395 1.8e-28 130.2 136 54.4
A09p34780 Brassica napus HOM05D001038 ORTHO05D000395 3.1e-28 129.4 140 53.6
BraA05t21706Z Brassica rapa HOM05D001038 ORTHO05D019929 3.1e-28 129.4 138 52.2
BraA04t16494Z Brassica rapa HOM05D001038 ORTHO05D021947 5.4e-28 128.6 156 49.4
BcaNung00229 Brassica carinata HOM05D001038 ORTHO05D000395 2.7e-27 126.3 146 52.7
BraA09t36747Z Brassica rapa HOM05D001038 ORTHO05D000395 2.7e-27 126.3 138 54.3
A02p12560 Brassica napus HOM05D001038 ORTHO05D019929 5.9e-27 125.2 138 51.4
BolC7t42716H Brassica oleracea HOM05D001038 ORTHO05D019929 5.9e-27 125.2 144 50.0
BraA10t43452Z Brassica rapa HOM05D001038 ORTHO05D019929 5.9e-27 125.2 138 51.4
BcaB04g17766 Brassica carinata HOM05D001038 ORTHO05D000395 1.3e-26 124.0 146 52.1
BraA06t24710Z Brassica rapa HOM05D001038 ORTHO05D000395 3.8e-26 122.5 123 55.3
BolC6t38914H Brassica oleracea HOM05D001038 ORTHO05D000395 5.0e-26 122.1 147 48.3
BcaC07g37762 Brassica carinata HOM05D001038 ORTHO05D000395 6.6e-26 121.7 137 51.1
BolC8t48147H Brassica oleracea HOM05D001038 ORTHO05D000395 6.6e-26 121.7 137 51.1
BcaB06g27965 Brassica carinata HOM05D001038 ORTHO05D000395 8.6e-26 121.3 144 47.2
BcaB07g30174 Brassica carinata HOM05D001038 ORTHO05D000395 1.9e-25 120.2 139 51.1
C08p05950 Brassica napus HOM05D001038 ORTHO05D000395 4.3e-25 119.0 147 47.6
A02p27290 Brassica napus HOM05D001038 ORTHO05D000395 5.6e-25 118.6 137 51.8
BraA02t07755Z Brassica rapa HOM05D001038 ORTHO05D000395 5.6e-25 118.6 137 51.8
BcaB06g26021 Brassica carinata HOM05D001038 ORTHO05D000395 7.3e-25 118.2 138 50.7
BolC6t36138H Brassica oleracea HOM05D001038 ORTHO05D014932 1.6e-24 117.1 235 36.2
BraSC36t46061Z Brassica rapa HOM05D001038 ORTHO05D000395 1.6e-24 117.1 138 49.3
BcaB03g16578 Brassica carinata HOM05D001038 ORTHO05D000395 2.3e-23 113.2 139 48.9
BraA07t28816Z Brassica rapa HOM05D001038 ORTHO05D000395 2.3e-23 113.2 138 48.6
BcaB04g18537 Brassica carinata HOM05D001038 ORTHO05D000395 3.0e-23 112.8 141 49.6
C09p45390 Brassica napus HOM05D001038 ORTHO05D024072 3.0e-23 112.8 265 36.2
C07p12170 Brassica napus HOM05D001038 ORTHO05D010763 5.2e-23 112.1 141 48.2
C08p22730 Brassica napus HOM05D001038 ORTHO05D016776 8.9e-23 111.3 156 45.5
BolC7t41684H Brassica oleracea HOM05D001038 ORTHO05D010763 1.2e-22 110.9 141 48.2
BcaC03g15415 Brassica carinata HOM05D001038 ORTHO05D000395 1.5e-22 110.5 139 47.5
BcaC05g26744 Brassica carinata HOM05D001038 ORTHO05D000395 2.0e-22 110.2 117 53.8
BcaC08g47005 Brassica carinata HOM05D001038 ORTHO05D000395 2.0e-22 110.2 139 46.8
C02p45440 Brassica napus HOM05D001038 ORTHO05D000395 2.6e-22 109.8 119 50.4
C06p38180 Brassica napus HOM05D001038 ORTHO05D000395 3.4e-22 109.4 147 44.2
BraSC37t46126Z Brassica rapa HOM05D001038 ORTHO05D016776 4.4e-22 109.0 156 44.9
BcaC06g35484 Brassica carinata HOM05D001038 ORTHO05D000395 5.8e-22 108.6 115 54.8
A10p12170 Brassica napus HOM05D001038 ORTHO05D027789 5.8e-22 108.6 74 78.4
C03p74230 Brassica napus HOM05D001038 ORTHO05D000395 8.3e-21 104.8 83 69.9
BcaB02g10939 Brassica carinata HOM05D001038 ORTHO05D000395 3.2e-20 102.8 136 47.1
C09p39690 Brassica napus HOM05D001038 ORTHO05D000395 9.2e-20 101.3 83 67.5
C09p12410 Brassica napus HOM05D001038 ORTHO05D014953 2.0e-19 100.1 118 45.8
BolC9t56849H Brassica oleracea HOM05D001038 ORTHO05D000395 2.7e-19 99.8 82 67.1
BcaB02g11159 Brassica carinata HOM05D001038 ORTHO05D000395 4.6e-19 99.0 117 47.9
BcaC08g43120 Brassica carinata HOM05D001038 ORTHO05D032078 4.6e-19 99.0 111 49.5
BolC7t41881H Brassica oleracea HOM05D001038 ORTHO05D000395 4.6e-19 99.0 147 40.1
BolC7t43636H Brassica oleracea HOM05D001038 ORTHO05D000395 1.0e-18 97.8 140 45.0
Thhalv10009967m.g Eutrema salsugineum HOM05D001038 ORTHO05D010946 1.0e-18 97.8 161 41.0
BcaB03g16061 Brassica carinata HOM05D001038 ORTHO05D000395 2.3e-18 96.7 117 47.9
BcaB06g28131 Brassica carinata HOM05D001038 ORTHO05D000395 5.0e-18 95.5 115 47.0
BcaC08g46850 Brassica carinata HOM05D001038 ORTHO05D000395 1.9e-17 93.6 147 40.1
BolC7t44008H Brassica oleracea HOM05D001038 ORTHO05D000395 3.3e-17 92.8 165 41.2
BcaB06g26720 Brassica carinata HOM05D001038 ORTHO05D000395 4.3e-17 92.4 121 44.6
Thhalv10003372m.g Eutrema salsugineum HOM05D001038 ORTHO05D010946 4.3e-17 92.4 168 36.9
BcaB03g16620 Brassica carinata HOM05D001038 ORTHO05D000395 5.6e-17 92.0 138 42.0
BcaC04g23074 Brassica carinata HOM05D001038 ORTHO05D019962 5.6e-17 92.0 99 47.5
A10p07420 Brassica napus HOM05D001038 ORTHO05D000395 7.3e-17 91.7 77 64.9
C07p34820 Brassica napus HOM05D001038 ORTHO05D000395 7.3e-17 91.7 147 42.2
BolC9t57409H Brassica oleracea HOM05D001038 ORTHO05D024072 7.3e-17 91.7 117 48.7
Thhalv10002975m.g Eutrema salsugineum HOM05D001038 ORTHO05D000395 7.3e-17 91.7 168 38.7
A08p07690 Brassica napus HOM05D012553 ORTHO05D014953 2.1e-16 90.1 120 46.7
C07p21850 Brassica napus HOM05D001038 ORTHO05D019929 2.8e-16 89.7 115 47.0
Thhalv10002771m.g Eutrema salsugineum HOM05D001038 ORTHO05D010946 3.6e-16 89.4 176 36.4
C07p12210 Brassica napus HOM05D001038 ORTHO05D040877 4.7e-16 89.0 221 33.5
BolC2t11144H Brassica oleracea HOM05D001038 ORTHO05D040877 4.7e-16 89.0 221 33.9
BcaB05g23512 Brassica carinata HOM05D001038 ORTHO05D000395 6.2e-16 88.6 93 53.8
BolC3t19681H Brassica oleracea HOM05D001038 ORTHO05D000395 6.2e-16 88.6 99 54.5
BraA08t32783Z Brassica rapa HOM05D001038 ORTHO05D014953 6.2e-16 88.6 107 46.7
A10p17410 Brassica napus HOM05D001038 ORTHO05D000395 1.1e-15 87.8 158 38.6
Thhalv10029129m.g Eutrema salsugineum HOM05D001038 ORTHO05D010946 1.1e-15 87.8 178 36.0
BraA03t13820Z Brassica rapa HOM05D001038 ORTHO05D000395 1.8e-15 87.0 89 53.9
BraA05t21228Z Brassica rapa HOM05D001038 ORTHO05D018589 2.3e-15 86.7 146 39.0
BcaC05g27733 Brassica carinata HOM05D001038 ORTHO05D000395 3.1e-15 86.3 95 54.7
C05p37210 Brassica napus HOM05D001038 ORTHO05D000395 3.1e-15 86.3 95 54.7
BcaC06g33611 Brassica carinata HOM05D001038 ORTHO05D000395 8.9e-15 84.7 83 56.6
A05p23600 Brassica napus HOM05D001038 ORTHO05D018589 1.2e-14 84.3 155 37.4
C05p36690 Brassica napus HOM05D001038 ORTHO05D000395 1.2e-14 84.3 166 40.4
BcaC01g02304 Brassica carinata HOM05D001038 ORTHO05D000395 1.5e-14 84.0 97 45.4
C07p18280 Brassica napus HOM05D001038 ORTHO05D000395 1.5e-14 84.0 77 63.6
BcaB08g35144 Brassica carinata HOM05D001038 ORTHO05D021599 2.0e-14 83.6 131 38.9
BcaC04g19622 Brassica carinata HOM05D001038 ORTHO05D000395 2.0e-14 83.6 97 44.3
BcaC09g49024 Brassica carinata HOM05D001038 ORTHO05D000395 2.6e-14 83.2 97 46.4
BraA05t21309Z Brassica rapa HOM05D001038 ORTHO05D000395 2.6e-14 83.2 115 45.2
A01p38280 Brassica napus HOM05D001038 ORTHO05D000395 3.4e-14 82.8 146 34.2
BraA05t20013Z Brassica rapa HOM05D001038 ORTHO05D000395 3.4e-14 82.8 64 73.4
BraA09t41072Z Brassica rapa HOM05D001038 ORTHO05D000395 3.4e-14 82.8 146 34.2
BcaNung00468 Brassica carinata HOM05D001038 ORTHO05D000395 4.4e-14 82.4 97 44.3
C03p52030 Brassica napus HOM05D001038 ORTHO05D000395 7.5e-14 81.6 65 69.2
BolC3t17485H Brassica oleracea HOM05D001038 ORTHO05D000395 7.5e-14 81.6 65 69.2
BcaB01g00119 Brassica carinata HOM05D001038 ORTHO05D000395 1.3e-13 80.9 122 44.3
A04p22180 Brassica napus HOM05D001038 ORTHO05D000395 1.3e-13 80.9 148 37.2
BraA10t43039Z Brassica rapa HOM05D001038 ORTHO05D000395 1.3e-13 80.9 148 37.2
Thhalv10002173m.g Eutrema salsugineum HOM05D001038 ORTHO05D010946 1.7e-13 80.5 180 33.9
BraA02t06821Z Brassica rapa HOM05D001038 ORTHO05D000395 2.2e-13 80.1 177 33.9
C05p48930 Brassica napus HOM05D001038 ORTHO05D016716 3.7e-13 79.3 168 37.5
BolC5t33633H Brassica oleracea HOM05D001038 ORTHO05D016716 3.7e-13 79.3 168 37.5
BolC7t42338H Brassica oleracea HOM05D001038 ORTHO05D000395 4.9e-13 79.0 77 61.0
BcaC04g20742 Brassica carinata HOM05D001038 ORTHO05D010763 6.4e-13 78.6 97 43.3
C06p18900 Brassica napus HOM05D001038 ORTHO05D016716 1.1e-12 77.8 166 38.0
BolC5t32403H Brassica oleracea HOM05D001038 ORTHO05D016716 1.4e-12 77.4 170 38.8
BraA08t34217Z Brassica rapa HOM05D001038 ORTHO05D016716 1.4e-12 77.4 166 34.9
BolC7t41688H Brassica oleracea HOM05D001038 ORTHO05D000395 1.9e-12 77.0 136 38.2
BcaB06g28161 Brassica carinata HOM05D001038 ORTHO05D000395 2.4e-12 76.6 117 42.7
C04p40310 Brassica napus HOM05D001038 ORTHO05D033058 2.4e-12 76.6 115 44.3
BolC4t25611H Brassica oleracea HOM05D001038 ORTHO05D033058 2.4e-12 76.6 115 44.3
BraA06t25409Z Brassica rapa HOM05D001038 ORTHO05D000395 2.4e-12 76.6 77 61.0
BcaC06g34271 Brassica carinata HOM05D001038 ORTHO05D000395 7.0e-12 75.1 72 62.5
BolC1t03990H Brassica oleracea HOM05D001038 ORTHO05D000395 1.6e-11 73.9 172 32.0
BraA07t28562Z Brassica rapa HOM05D001038 ORTHO05D041939 2.7e-11 73.2 95 37.9
BraA10t43313Z Brassica rapa HOM05D001038 ORTHO05D024072 4.6e-11 72.4 113 43.4
BolC5t32608H Brassica oleracea HOM05D001038 ORTHO05D000395 7.8e-11 71.6 150 32.7
BcaC09g51573 Brassica carinata HOM05D001038 ORTHO05D000395 3.0e-10 69.7 170 30.0
C05p38680 Brassica napus HOM05D001038 ORTHO05D000395 5.0e-10 68.9 154 33.1
A07p07700 Brassica napus HOM05D001038 ORTHO05D041939 8.6e-10 68.2 96 36.5
C07p07480 Brassica napus HOM05D001038 ORTHO05D000395 8.6e-10 68.2 177 29.9
BolC7t41164H Brassica oleracea HOM05D001038 ORTHO05D000395 8.6e-10 68.2 177 29.9
BolC2t08169H Brassica oleracea HOM05D001038 ORTHO05D010946 1.1e-09 67.8 155 34.2
BcaB06g28542 Brassica carinata HOM05D001038 ORTHO05D000395 1.5e-09 67.4 172 30.2
BraA07t28383Z Brassica rapa HOM05D001038 ORTHO05D032078 3.3e-09 66.2 54 53.7
C09p22250 Brassica napus HOM05D001038 ORTHO05D000395 9.5e-09 64.7 170 29.4
BcaB08g34843 Brassica carinata HOM05D001038 ORTHO05D010946 1.2e-08 64.3 164 32.3
A03p68060 Brassica napus HOM05D001038 ORTHO05D000395 1.2e-08 64.3 121 35.5
BolC8t47777H Brassica oleracea HOM05D001038 ORTHO05D014953 1.6e-08 63.9 79 50.6
BNapus_Darmor_BZH_scaffold_103p00080 Brassica napus HOM05D001038 ORTHO05D000395 2.1e-08 63.5 65 61.5
BcaB05g21586 Brassica carinata HOM05D001038 ORTHO05D000395 6.2e-08 62.0 162 31.5
BolC4t27362H Brassica oleracea HOM05D001038 ORTHO05D000395 8.1e-08 61.6 83 49.4
BolC6t36762H Brassica oleracea HOM05D001038 ORTHO05D000395 3.1e-07 59.7 58 62.1
BcaB08g35558 Brassica carinata HOM05D001038 ORTHO05D000395 4.0e-07 59.3 162 30.9
C06p10570 Brassica napus HOM05D001038 ORTHO05D014932 4.0e-07 59.3 61 41.0
BolC2t11347H Brassica oleracea HOM05D001038 ORTHO05D000395 6.8e-07 58.5 156 29.5
AL8G20830 Arabidopsis lyrata HOM05D001038 ORTHO05D000395 1.2e-06 57.8 133 31.6
BcaC06g33888 Brassica carinata HOM05D001038 ORTHO05D017617 2.0e-06 57.0 170 27.1
Carub.0013s0014 Capsella rubella HOM05D001038 ORTHO05D000395 3.4e-06 56.2 164 28.7
BcaB01g02416 Brassica carinata HOM05D011654 ORTHO05D010946 4.4e-06 55.8 137 30.7
C02p30270 Brassica napus HOM05D001038 ORTHO05D000395 4.4e-06 55.8 66 51.5
BcaC06g35567 Brassica carinata HOM05D001038 ORTHO05D000395 9.9e-06 54.7 124 33.9
A05p28250 Brassica napus HOM05D001038 ORTHO05D019929 9.9e-06 54.7 50 50.0
C01p43230 Brassica napus HOM05D001038 ORTHO05D032341 9.9e-06 54.7 53 54.7


User provided reference genes

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