Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
A01p17460 Brassica napus HOM05D004448 ORTHO05D015948 8.3e-187 657.1 396 100.0
BcaC09g50676 Brassica carinata HOM05D004448 ORTHO05D015948 1.4e-162 576.6 396 89.4
C01p21980 Brassica napus HOM05D004448 ORTHO05D015948 1.4e-162 576.6 396 89.4
BraA01t01701Z Brassica rapa HOM05D004448 ORTHO05D015948 2.3e-152 542.7 396 80.8
BcaNung02444 Brassica carinata HOM05D004448 ORTHO05D015948 1.5e-127 460.3 364 78.6
Sp7g24190 Schrenkiella parvula HOM05D004448 ORTHO05D015948 6.1e-105 385.2 381 59.3
AL7G26800 Arabidopsis lyrata HOM05D004448 ORTHO05D015948 2.7e-92 343.2 377 54.1
Carub.0007s1478 Capsella rubella HOM05D004448 ORTHO05D015948 6.4e-86 322.0 397 58.4
CARHR233700 Cardamine hirsuta HOM05D004448 ORTHO05D015948 6.2e-81 305.4 397 49.9
Thhalv10025245m.g Eutrema salsugineum HOM05D004448 ORTHO05D015948 2.2e-70 270.4 335 51.6
Aa31LG3G540 Aethionema arabicum HOM05D001256 ORTHO05D001141 5.6e-66 255.8 439 44.9
AT4G26170 Arabidopsis thaliana HOM05D004448 ORTHO05D015948 2.1e-60 237.3 318 49.4
AL8G32620 Arabidopsis lyrata HOM05D004448 ORTHO05D005919 4.3e-42 176.4 487 32.0
Sp6g18520 Schrenkiella parvula HOM05D004448 ORTHO05D005919 2.9e-38 163.7 465 32.0
BcaB08g36059 Brassica carinata HOM05D004448 ORTHO05D005919 4.9e-38 162.9 459 31.8
AT5G56780 Arabidopsis thaliana HOM05D004448 ORTHO05D005919 1.4e-37 161.4 262 41.2
Thhalv10015325m.g Eutrema salsugineum HOM05D004448 ORTHO05D005919 5.1e-35 152.9 452 31.2
Carub.0008s1726 Capsella rubella HOM05D004448 ORTHO05D005919 6.7e-35 152.5 258 39.1
CARHR270530 Cardamine hirsuta HOM05D004448 ORTHO05D005919 6.7e-35 152.5 268 39.6
BcaC04g20054 Brassica carinata HOM05D004448 ORTHO05D005919 8.7e-35 152.1 465 30.5
C09p48340 Brassica napus HOM05D004448 ORTHO05D005919 8.7e-35 152.1 465 30.5
BolC9t57684H Brassica oleracea HOM05D004448 ORTHO05D005919 3.3e-34 150.2 463 30.5
BraA05t19157Z Brassica rapa HOM05D004448 ORTHO05D005919 4.3e-34 149.8 448 31.5
BraA10t43502Z Brassica rapa HOM05D004448 ORTHO05D005919 4.3e-34 149.8 463 31.5
A10p14110 Brassica napus HOM05D004448 ORTHO05D005919 7.4e-34 149.1 463 31.5
BcaC02g12705 Brassica carinata HOM05D004448 ORTHO05D005919 1.6e-33 147.9 444 30.4
C04p01820 Brassica napus HOM05D004448 ORTHO05D005919 4.0e-32 143.3 449 30.3
BcaC02g12506 Brassica carinata HOM05D004448 ORTHO05D005919 2.0e-31 141.0 248 39.1
Aa31LG3G12720 Aethionema arabicum HOM05D004448 ORTHO05D005919 1.7e-30 137.9 464 28.9
Aa31LG2G21230 Aethionema arabicum HOM05D004448 ORTHO05D005919 4.2e-29 133.3 420 30.5
THA.LOC104813490 Tarenaya hassleriana HOM05D004448 ORTHO05D005919 3.5e-28 130.2 233 39.5
A05p01610 Brassica napus HOM05D004448 ORTHO05D005919 5.1e-19 99.8 332 30.1
BraA05t19155Z Brassica rapa HOM05D004448 ORTHO05D005919 5.0e-14 83.2 149 35.6
Sc18g0001910 Simmondsia chinensis HOM05D004448 ORTHO05D005919 3.0e-11 73.9 124 37.9
Cpa.g.sc7.238 Carica papaya HOM05D004448 ORTHO05D005919 8.8e-11 72.4 127 40.9
DCAR_024685 Daucus carota HOM05D004448 ORTHO05D005919 7.0e-08 62.8 287 24.0
Ciclev10010615m.g Citrus clementina HOM05D004448 ORTHO05D005919 2.0e-07 61.2 188 27.7
Haze_25890 Corylus avellana HOM05D004448 ORTHO05D005919 1.0e-06 58.9 128 35.2
MBI08_g34934_MAGBIO Magnolia biondii HOM05D004448 ORTHO05D005919 1.3e-06 58.5 135 29.6
AUR62027409 Chenopodium quinoa HOM05D004448 ORTHO05D005919 3.8e-06 57.0 230 24.3
PSO210G5509 Papaver somniferum HOM05D004448 ORTHO05D005919 5.0e-06 56.6 112 37.5
Rhsim05G0023200 Rhododendron simsii HOM05D004448 ORTHO05D005919 8.5e-06 55.8 75 36.0
RhsimUnG0032400 Rhododendron simsii HOM05D004448 ORTHO05D005919 8.5e-06 55.8 120 29.2
RhsimUnG0144800 Rhododendron simsii HOM05D004448 ORTHO05D005919 8.5e-06 55.8 75 36.0
RhsimUnG0145000 Rhododendron simsii HOM05D004448 ORTHO05D005919 8.5e-06 55.8 90 37.8
Sabra06G0118700 Salix brachista HOM05D004448 ORTHO05D005919 8.5e-06 55.8 214 24.3


User provided reference genes

Program Settings