Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
A01p17340 Brassica napus HOM05D000003 ORTHO05D021580 9.4e-46 186.4 89 100.0
BcaNung00257 Brassica carinata HOM05D000003 ORTHO05D021580 7.2e-38 160.2 89 91.0
BolC2t11105H Brassica oleracea HOM05D000003 ORTHO05D021580 5.2e-28 127.5 73 84.9
BcaC01g02466 Brassica carinata HOM05D000003 ORTHO05D009772 1.1e-17 93.2 83 53.0
C02p17900 Brassica napus HOM05D000003 ORTHO05D009772 2.7e-16 88.6 87 51.7
BolC2t07921H Brassica oleracea HOM05D000003 ORTHO05D009772 2.7e-16 88.6 87 51.7
BcaB02g10745 Brassica carinata HOM05D000003 ORTHO05D009772 2.9e-15 85.1 86 46.5
BcaB08g35992 Brassica carinata HOM05D000003 ORTHO05D009772 5.2e-12 74.3 83 42.2
Aa31LG11G6710 Aethionema arabicum HOM05D000003 ORTHO05D009772 7.0e-09 63.9 89 38.2
BcaB04g20717 Brassica carinata HOM05D000003 ORTHO05D009772 7.0e-09 63.9 83 38.6
BcaB04g18525 Brassica carinata HOM05D000003 ORTHO05D009772 9.2e-09 63.5 83 39.8
BcaB04g18526 Brassica carinata HOM05D000003 ORTHO05D009772 9.2e-09 63.5 83 39.8
BolC6t38377H Brassica oleracea HOM05D000003 ORTHO05D009772 2.0e-08 62.4 85 40.0
AT3G60040 Arabidopsis thaliana HOM05D000689 ORTHO05D000015 2.7e-08 62.0 84 36.9
Aa31LG10G2340 Aethionema arabicum HOM05D000003 ORTHO05D000004 4.5e-08 61.2 87 34.5
C08p15950 Brassica napus HOM05D000003 ORTHO05D009772 5.9e-08 60.8 85 37.6
Aa31LG9G5230 Aethionema arabicum HOM05D000003 ORTHO05D000004 1.7e-07 59.3 86 34.9
Aa31LG5G23430 Aethionema arabicum HOM05D000003 ORTHO05D000004 2.9e-07 58.5 86 34.9
BcaC04g20002 Brassica carinata HOM05D000003 ORTHO05D009772 2.9e-07 58.5 71 40.8
BolC7t43567H Brassica oleracea HOM05D000003 ORTHO05D009772 3.9e-07 58.2 84 36.9
Aa31LG2G17780 Aethionema arabicum HOM05D000003 ORTHO05D009772 1.1e-06 56.6 87 33.3
BolC4t28430H Brassica oleracea HOM05D000003 ORTHO05D009772 1.1e-06 56.6 63 42.9
Aa31sc200G60 Aethionema arabicum HOM05D000003 ORTHO05D009772 1.5e-06 56.2 85 34.1
Aa31LG8G16480 Aethionema arabicum HOM05D000003 ORTHO05D000004 2.5e-06 55.5 87 31.0
BcaB02g07463 Brassica carinata HOM05D000003 ORTHO05D093658 2.5e-06 55.5 46 58.7
Aa31LG5G23610 Aethionema arabicum HOM05D000003 ORTHO05D000411 3.3e-06 55.1 86 32.6
Aa31sc369G20 Aethionema arabicum HOM05D000003 ORTHO05D009772 3.3e-06 55.1 85 31.8
Sp6g13220 Schrenkiella parvula HOM05D000003 ORTHO05D000006 4.3e-06 54.7 88 39.8
Aa31LG2G16390 Aethionema arabicum HOM05D000003 ORTHO05D000004 5.6e-06 54.3 86 32.6
C02p33590 Brassica napus HOM05D000003 ORTHO05D021580 5.6e-06 54.3 45 51.1
Aa31LG4G19050 Aethionema arabicum HOM05D000003 ORTHO05D009772 7.3e-06 53.9 87 29.9
A04p22340 Brassica napus HOM05D014135 ORTHO05D027857 9.5e-06 53.5 66 37.9


User provided reference genes

Program Settings