Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
A01p15500 Brassica napus HOM05D006975 ORTHO05D008736 4.5e-165 584.7 335 100.0
BraA01t01489Z Brassica rapa HOM05D006975 ORTHO05D008736 8.7e-145 517.3 335 91.9
BcaC09g50900 Brassica carinata HOM05D006975 ORTHO05D008736 5.0e-140 501.5 337 87.2
BolC1t01871H Brassica oleracea HOM05D006975 ORTHO05D008736 2.5e-139 499.2 337 83.7
C01p19420 Brassica napus HOM05D006975 ORTHO05D008736 7.2e-139 497.7 337 83.4
BcaNung01123 Brassica carinata HOM05D006975 ORTHO05D008736 6.5e-116 421.4 339 75.8
Sp7g22140 Schrenkiella parvula HOM05D006975 ORTHO05D008736 7.2e-115 417.9 336 71.7
AL7G29110 Arabidopsis lyrata HOM05D006975 ORTHO05D008736 1.7e-111 406.8 335 70.1
CARHR231580 Cardamine hirsuta HOM05D006975 ORTHO05D008736 1.3e-103 380.6 335 66.6
Thhalv10025797m.g Eutrema salsugineum HOM05D006975 ORTHO05D008736 8.3e-103 377.9 337 66.5
AT4G24175 Arabidopsis thaliana HOM05D006975 ORTHO05D008736 7.7e-101 371.3 336 66.1
Carub.0007s1692 Capsella rubella HOM05D006975 ORTHO05D008736 4.9e-95 352.1 337 63.8
Aa31sc424G20 Aethionema arabicum HOM05D006975 ORTHO05D008736 2.1e-74 283.5 346 54.0
THA.LOC104798667 Tarenaya hassleriana HOM05D006975 ORTHO05D008736 2.3e-73 280.0 256 62.1
Potri.005G240800 Populus trichocarpa HOM05D006975 ORTHO05D008736 1.1e-57 228.0 264 50.4
Duzib093G1023 Durio zibethinus HOM05D006975 ORTHO05D008736 9.0e-57 224.9 332 46.7
CiPaw.08G066800 Carya illinoinensis HOM05D006975 ORTHO05D008736 4.4e-56 222.6 254 51.6
Sabra05G0186300 Salix brachista HOM05D006975 ORTHO05D008736 1.3e-55 221.1 264 50.4
Gohir.D01G097400 Gossypium hirsutum HOM05D006975 ORTHO05D008736 3.8e-55 219.5 330 43.6
Gorai.002G123100 Gossypium raimondii HOM05D006975 ORTHO05D008736 6.4e-55 218.8 330 43.3
Gohir.A01G110800 Gossypium hirsutum HOM05D006975 ORTHO05D008736 5.4e-54 215.7 333 43.2
COL.COLO4_26134 Corchorus olitorius HOM05D006975 ORTHO05D008736 9.3e-54 214.9 337 43.9
TWI12G0084 Tripterygium wilfordii HOM05D006975 ORTHO05D008736 1.6e-53 214.2 334 45.2
CANSAT25G0709 Cannabis sativa HOM05D006975 ORTHO05D008736 2.7e-53 213.4 246 50.8
Cpa.g.sc26.57 Carica papaya HOM05D006975 ORTHO05D008736 4.6e-53 212.6 335 43.0
Sopen04g035150 Solanum pennellii HOM05D006975 ORTHO05D008736 1.0e-52 211.5 254 48.8
Solyc04g081540.3 Solanum lycopersicum HOM05D006975 ORTHO05D008736 2.3e-52 210.3 254 48.4
PGSC0003DMG401009870 Solanum tuberosum HOM05D006975 ORTHO05D008736 3.9e-52 209.5 243 50.6
CSS0026180 Camellia sinensis var. sinensis HOM05D006975 ORTHO05D008736 6.6e-52 208.8 249 49.8
Dinv39526 Davidia involucrata HOM05D006975 ORTHO05D008736 3.3e-51 206.5 331 42.9
CSS0040454 Camellia sinensis var. sinensis HOM05D006975 ORTHO05D008736 9.6e-51 204.9 249 49.4
TAR536G0001 Trochodendron aralioides HOM05D006975 ORTHO05D008736 9.6e-51 204.9 335 42.1
Manes.05G146300 Manihot esculenta HOM05D006975 ORTHO05D008736 1.3e-50 204.5 337 41.8
Haze_04763 Corylus avellana HOM05D006975 ORTHO05D008736 2.1e-50 203.8 332 43.7
EL10Ac1g02185 Beta vulgaris HOM05D006975 ORTHO05D008736 1.4e-49 201.1 259 44.8
PGR031G2234 Punica granatum HOM05D006975 ORTHO05D008736 1.8e-49 200.7 343 43.1
Cfa006087 Carpinus fangiana HOM05D006975 ORTHO05D008736 6.9e-49 198.7 334 42.2
Cc10_g01570 Coffea canephora HOM05D006975 ORTHO05D008736 6.9e-49 198.7 338 42.0
GSVIVG01009926001 Vitis vinifera HOM05D006975 ORTHO05D008736 1.2e-48 198.0 344 42.2
CAN.G311.39 Capsicum annuum HOM05D006975 ORTHO05D008736 2.6e-48 196.8 355 40.8
Phvul.007G020200 Phaseolus vulgaris HOM05D006975 ORTHO05D008736 3.4e-48 196.4 331 39.6
Lj4A797T59 Lonicera japonica HOM05D006975 ORTHO05D008736 1.3e-47 194.5 259 47.1
QL02p011816 Quercus lobata HOM05D006975 ORTHO05D008736 3.8e-47 193.0 386 37.0
Ca_11200_v3 Cicer arietinum L. HOM05D006975 ORTHO05D008736 8.4e-47 191.8 251 46.2
Nitab4.5_0008000g0010 Nicotiana tabacum HOM05D006975 ORTHO05D008736 1.1e-46 191.4 334 39.2
TPR.G2436 Trifolium pratense HOM05D006975 ORTHO05D008736 1.1e-46 191.4 246 45.9
Lj5g0003318 Lotus japonicus HOM05D006975 ORTHO05D008736 1.4e-46 191.0 248 46.0
Oeu027521.1 Olea europaea HOM05D006975 ORTHO05D008736 1.4e-46 191.0 240 48.3
MD08G1012000 Malus domestica HOM05D006975 ORTHO05D008736 1.9e-46 190.7 250 48.0
PSO675G8288 Papaver somniferum HOM05D006975 ORTHO05D008736 4.2e-46 189.5 256 46.9
Atru.chr13.277_Atru.chr13.278 Acer truncatum HOM05D006975 ORTHO05D008736 9.3e-46 188.3 228 50.0
MBI05_g19267_MAGBIO Magnolia biondii HOM05D006975 ORTHO05D008736 1.6e-45 187.6 256 45.7
Nn1g05932 Nelumbo nucifera HOM05D006975 ORTHO05D008736 1.6e-45 187.6 250 46.0
Medtr1g112320 Medicago truncatula HOM05D006975 ORTHO05D008736 2.1e-45 187.2 249 44.6
ECA232G2413 Erigeron canadensis HOM05D006975 ORTHO05D008736 3.5e-45 186.4 334 39.2
Actinidia15428 Actinidia chinensis HOM05D006975 ORTHO05D008736 4.6e-45 186.0 211 51.2
ClCG05G018220 Citrullus lanatus HOM05D006975 ORTHO05D008736 6.0e-45 185.7 259 45.6
HanXRQChr05g0145201 Helianthus annuus HOM05D006975 ORTHO05D008736 1.0e-44 184.9 343 40.2
Hma1.2p1_0023F.1_g015550 Hydrangea macrophylla HOM05D006975 ORTHO05D008736 1.3e-44 184.5 238 44.5
CsaV3_3G045930 Cucumis sativus L. HOM05D006975 ORTHO05D008736 2.3e-44 183.7 259 46.3
PSO541G1271 Papaver somniferum HOM05D006975 ORTHO05D008736 3.0e-44 183.3 259 45.2
Thecc.08G046000 Theobroma cacao HOM05D006975 ORTHO05D008736 3.0e-44 183.3 282 44.3
Sed0023128 Sechium edule HOM05D006975 ORTHO05D008736 1.1e-43 181.4 255 45.9
Psat6g231560 Pisum sativum HOM05D006975 ORTHO05D008736 1.9e-43 180.6 319 39.5
Prupe.1G364300 Prunus persica HOM05D006975 ORTHO05D008736 2.5e-43 180.3 243 47.7
Lalb_Chr02g0143331 Lupinus albus HOM05D006975 ORTHO05D008736 3.3e-43 179.9 343 39.7
HPP92_004984 Vanilla planifolia HOM05D006975 ORTHO05D008736 4.3e-43 179.5 257 44.7
MSTRG.1185 Avicennia marina HOM05D006975 ORTHO05D008736 7.4e-43 178.7 238 47.5
Hund05184 Selenicereus undatus HOM05D006975 ORTHO05D008736 1.6e-42 177.6 244 45.5
Aqoxy6G02228 Aquilegia oxysepala HOM05D006975 ORTHO05D008736 2.1e-42 177.2 244 44.3
arahy.Tifrunner.gnm1.ann1.Z9XT7U Arachis hypogaea HOM05D006975 ORTHO05D008736 2.1e-42 177.2 243 45.7
DCAR_021031 Daucus carota HOM05D006975 ORTHO05D008736 2.1e-42 177.2 250 42.4
VMungo0720G0770 Vigna mungo HOM05D006975 ORTHO05D008736 2.1e-42 177.2 250 42.4
Eucgr.H00993 Eucalyptus grandis HOM05D006975 ORTHO05D008736 2.8e-42 176.8 230 48.3
AUR62035015 Chenopodium quinoa HOM05D006975 ORTHO05D008736 3.7e-42 176.4 243 43.2
Sed0014296 Sechium edule HOM05D006975 ORTHO05D008736 1.1e-41 174.9 261 43.3
MELO3C003746.2 Cucumis melo HOM05D006975 ORTHO05D008736 3.1e-41 173.3 347 38.6
Ciclev10001912m.g Citrus clementina HOM05D006975 ORTHO05D008736 5.3e-41 172.6 335 39.1
Os04g0250700 Oryza sativa ssp. japonica HOM05D006975 ORTHO05D008736 6.9e-41 172.2 256 42.2
Atru.chr13.275 Acer truncatum HOM05D006975 ORTHO05D008736 1.5e-40 171.0 269 44.2
Glyma.20G108900 Glycine max HOM05D006975 ORTHO05D008736 2.0e-40 170.6 249 43.8
FvH4_2g38330 Fragaria vesca HOM05D006975 ORTHO05D008736 2.6e-40 170.2 329 38.3
SGA_v2.0_scaffold11G05927 Striga asiatica HOM05D006975 ORTHO05D008736 3.4e-40 169.9 348 37.9
RcHm_v2.0_Chr6g0303031 Rosa chinensis HOM05D006975 ORTHO05D008736 1.7e-39 167.5 332 38.9
CDE04G0963 Ceratophyllum demersum HOM05D006975 ORTHO05D008736 2.2e-39 167.2 253 41.9
Migut.C00848 Erythranthe guttata HOM05D006975 ORTHO05D008736 2.9e-39 166.8 332 37.7
Zm00001eb086730 Zea mays HOM05D006975 ORTHO05D008736 3.8e-39 166.4 251 42.2
Rhsim06G0020700 Rhododendron simsii HOM05D006975 ORTHO05D008736 7.1e-38 162.2 336 37.2
FAN20G0256 Fragaria x ananassa HOM05D006975 ORTHO05D008736 2.1e-37 160.6 340 36.8
Lsat_1_v5_gn_0_34641 Lactuca sativa HOM05D006975 ORTHO05D008736 7.9e-37 158.7 237 43.0
unitig_748.g7725 Utricularia gibba HOM05D006975 ORTHO05D008736 7.9e-37 158.7 234 43.2
Peaxi162Scf00553g00101 Petunia axillaris HOM05D006975 ORTHO05D008736 1.1e-35 154.8 227 43.6
FAN15G2275 Fragaria x ananassa HOM05D006975 ORTHO05D008736 1.9e-35 154.1 335 37.6
MD08G1011800 Malus domestica HOM05D006975 ORTHO05D008736 1.6e-34 151.0 229 43.7
AUR62041899 Chenopodium quinoa HOM05D006975 ORTHO05D008736 3.1e-33 146.7 210 43.3
THA.LOC104798678 Tarenaya hassleriana HOM05D006975 ORTHO05D008736 4.0e-33 146.4 351 41.9
FAN27G0483 Fragaria x ananassa HOM05D006975 ORTHO05D008736 1.3e-31 141.4 237 40.1
vmacro07578 Vaccinium macrocarpon HOM05D006975 ORTHO05D008736 4.6e-29 132.9 319 32.6
Hma1.2p1_0023F.1_g015540 Hydrangea macrophylla HOM05D006975 ORTHO05D008736 5.7e-27 125.9 241 36.5
arahy.Tifrunner.gnm1.ann1.Y91ZV9 Arachis hypogaea HOM05D006975 ORTHO05D008736 1.8e-25 120.9 310 33.2
Pp3c5_3830 Physcomitrium patens HOM05D006975 ORTHO05D008736 2.9e-23 113.6 244 35.7
ATR0564G524 Amborella trichopoda HOM05D006975 ORTHO05D008736 5.7e-19 99.4 242 32.2
TAR381G1583 Trochodendron aralioides HOM05D006975 ORTHO05D008736 6.3e-18 95.9 156 41.7
Eucgr.H00979 Eucalyptus grandis HOM05D006975 ORTHO05D008736 6.9e-17 92.4 143 42.7
Mapoly0138s0045 Marchantia polymorpha HOM05D006975 ORTHO05D008736 1.3e-15 88.2 262 29.8
SEGI_37599 Sequoiadendron giganteum HOM05D006975 ORTHO05D008736 3.2e-14 83.6 62 62.9
Eucgr.F00573 Eucalyptus grandis HOM05D006975 ORTHO05D008736 1.5e-11 74.7 158 35.4
TAR628G0560 Trochodendron aralioides HOM05D006975 ORTHO05D008736 2.6e-11 73.9 140 39.3
SEGI_16371 Sequoiadendron giganteum HOM05D006975 ORTHO05D008736 6.3e-10 69.3 102 39.2
arahy.Tifrunner.gnm1.ann1.1D0YR0 Arachis hypogaea HOM05D006975 ORTHO05D008736 5.3e-09 66.2 85 44.7
CDE02G4250 Ceratophyllum demersum HOM05D000565 ORTHO05D004389 7.0e-09 65.9 112 39.3
CBR_g44391 Chara braunii HOM05D006975 ORTHO05D008736 2.6e-08 63.9 148 32.4
Pp3c8_21620 Physcomitrium patens HOM05D003148 ORTHO05D003894 4.5e-08 63.2 132 33.3
Eucgr.H00983 Eucalyptus grandis HOM05D006975 ORTHO05D008736 7.7e-08 62.4 54 53.7
Eucgr.F00575 Eucalyptus grandis HOM05D006975 ORTHO05D008736 2.9e-07 60.5 96 44.8
Pp3c24_16390 Physcomitrium patens HOM05D003148 ORTHO05D003894 7.2e-06 55.8 122 30.3


User provided reference genes

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