Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaC09g51212 Brassica carinata HOM05D006296 ORTHO05D007777 1.1e-72 276.6 137 100.0
A01p13040 Brassica napus HOM05D006296 ORTHO05D007777 1.1e-72 276.6 137 100.0
C01p15710 Brassica napus HOM05D006296 ORTHO05D007777 1.1e-72 276.6 137 100.0
BolC1t01524H Brassica oleracea HOM05D006296 ORTHO05D007777 1.1e-72 276.6 137 100.0
BraA01t01246Z Brassica rapa HOM05D006296 ORTHO05D007777 1.1e-72 276.6 137 100.0
A03p52890 Brassica napus HOM05D006296 ORTHO05D007777 6.9e-64 247.3 138 92.0
BraA03t14365Z Brassica rapa HOM05D006296 ORTHO05D007777 6.9e-64 247.3 138 92.0
BcaC06g30674 Brassica carinata HOM05D006296 ORTHO05D007777 5.8e-63 244.2 138 90.6
BcaNung00839 Brassica carinata HOM05D006296 ORTHO05D007777 5.8e-63 244.2 141 90.8
Sp7g19880 Schrenkiella parvula HOM05D006296 ORTHO05D007777 1.7e-62 242.7 137 88.3
BcaNung00841 Brassica carinata HOM05D006296 ORTHO05D007777 4.2e-61 238.0 144 86.1
AL7G32220 Arabidopsis lyrata HOM05D006296 ORTHO05D007777 1.1e-58 229.9 140 80.0
CARHR228450 Cardamine hirsuta HOM05D006296 ORTHO05D007777 4.3e-58 228.0 137 81.8
Thhalv10026538m.g Eutrema salsugineum HOM05D006296 ORTHO05D007777 4.3e-58 228.0 137 84.7
BcaNung02241 Brassica carinata HOM05D006296 ORTHO05D007777 2.1e-57 225.7 132 80.3
AT4G21720 Arabidopsis thaliana HOM05D006296 ORTHO05D007777 4.0e-56 221.5 140 77.9
THA.LOC104812881 Tarenaya hassleriana HOM05D006296 ORTHO05D007777 6.9e-56 220.7 139 77.7
Carub.0007s1968 Capsella rubella HOM05D006296 ORTHO05D007777 9.0e-56 220.3 137 76.6
Dinv07546 Davidia involucrata HOM05D006296 ORTHO05D007777 1.7e-54 216.1 140 68.6
TWI38G1090 Tripterygium wilfordii HOM05D006296 ORTHO05D007777 8.4e-54 213.8 144 68.1
CSS0006104 Camellia sinensis var. sinensis HOM05D006296 ORTHO05D007777 1.1e-53 213.4 129 78.3
arahy.Tifrunner.gnm1.ann1.6I4RI9 Arachis hypogaea HOM05D006296 ORTHO05D007777 1.9e-53 212.6 137 74.5
Duzib235G1545 Durio zibethinus HOM05D006296 ORTHO05D007777 3.2e-53 211.8 139 69.1
CiPaw.10G047400 Carya illinoinensis HOM05D006296 ORTHO05D007777 1.6e-52 209.5 108 78.7
Lalb_Chr16g0383701 Lupinus albus HOM05D006296 ORTHO05D007777 1.6e-52 209.5 108 80.6
ECA247G1807 Erigeron canadensis HOM05D006296 ORTHO05D007777 2.1e-52 209.1 137 69.3
Hma1.2p1_0126F.1_g059310 Hydrangea macrophylla HOM05D006296 ORTHO05D007777 2.1e-52 209.1 107 80.4
Aa31LG6G3700 Aethionema arabicum HOM05D006296 ORTHO05D007777 4.6e-52 208.0 157 69.4
Solyc10g009040.4 Solanum lycopersicum HOM05D006296 ORTHO05D007777 4.6e-52 208.0 142 67.6
Sopen10g004820 Solanum pennellii HOM05D006296 ORTHO05D007777 4.6e-52 208.0 142 67.6
EL10Ac8g20365 Beta vulgaris HOM05D006296 ORTHO05D007777 1.3e-51 206.5 137 66.4
Duzib160G0870 Durio zibethinus HOM05D006296 ORTHO05D007777 1.3e-51 206.5 139 66.2
Nitab4.5_0013250g0030 Nicotiana tabacum HOM05D006296 ORTHO05D007777 2.3e-51 205.7 142 66.2
HanXRQChr01g0003901 Helianthus annuus HOM05D006296 ORTHO05D007777 3.0e-51 205.3 140 66.4
Lsat_1_v5_gn_1_126121 Lactuca sativa HOM05D006296 ORTHO05D007777 3.0e-51 205.3 137 72.3
Cfa000430 Carpinus fangiana HOM05D006296 ORTHO05D007777 3.9e-51 204.9 137 74.5
Cc02_g13190 Coffea canephora HOM05D006296 ORTHO05D007777 6.7e-51 204.1 143 69.2
Sc05g0007770 Simmondsia chinensis HOM05D006296 ORTHO05D007777 6.7e-51 204.1 137 65.7
Manes.16G026200 Manihot esculenta HOM05D006296 ORTHO05D007777 8.7e-51 203.8 143 62.2
Aqoxy1G02520 Aquilegia oxysepala HOM05D006296 ORTHO05D007777 1.1e-50 203.4 134 66.4
Glyma.13G180700 Glycine max HOM05D006296 ORTHO05D007777 1.1e-50 203.4 141 70.9
Nitab4.5_0003942g0060 Nicotiana tabacum HOM05D006296 ORTHO05D007777 1.5e-50 203.0 142 65.5
Psat7g112640 Pisum sativum HOM05D006296 ORTHO05D007777 1.5e-50 203.0 137 64.2
Hund21232 Selenicereus undatus HOM05D006296 ORTHO05D007777 1.5e-50 203.0 138 66.7
CsaV3_6G050070 Cucumis sativus L. HOM05D006296 ORTHO05D007777 2.5e-50 202.2 144 63.2
Gohir.A06G126500 Gossypium hirsutum HOM05D006296 ORTHO05D007777 2.5e-50 202.2 139 63.3
Gohir.D06G131300 Gossypium hirsutum HOM05D006296 ORTHO05D007777 2.5e-50 202.2 139 63.3
Gorai.010G153200 Gossypium raimondii HOM05D006296 ORTHO05D007777 2.5e-50 202.2 139 63.3
Thecc.06G189800 Theobroma cacao HOM05D006296 ORTHO05D007777 2.5e-50 202.2 139 66.9
QL05p039836 Quercus lobata HOM05D006296 ORTHO05D007777 4.3e-50 201.4 136 64.0
TPR.G12044 Trifolium pratense HOM05D006296 ORTHO05D007777 5.7e-50 201.1 107 75.7
Glyma.07G195600 Glycine max HOM05D006296 ORTHO05D007777 7.4e-50 200.7 108 77.8
MELO3C007289.2 Cucumis melo HOM05D006296 ORTHO05D007777 9.7e-50 200.3 144 62.5
Ca_18536_v3 Cicer arietinum L. HOM05D006296 ORTHO05D007777 1.3e-49 199.9 104 76.9
Phvul.006G187000 Phaseolus vulgaris HOM05D006296 ORTHO05D007777 1.6e-49 199.5 137 66.4
Lj6g0008813 Lotus japonicus HOM05D006296 ORTHO05D007777 2.8e-49 198.7 137 64.2
PSO675G2929 Papaver somniferum HOM05D006296 ORTHO05D007777 2.8e-49 198.7 134 65.7
SEGI_22799 Sequoiadendron giganteum HOM05D006296 ORTHO05D007777 3.7e-49 198.4 134 66.4
Medtr4g088930 Medicago truncatula HOM05D006296 ORTHO05D007777 6.3e-49 197.6 107 73.8
VMungo0251G3500 Vigna mungo HOM05D006296 ORTHO05D007777 6.3e-49 197.6 139 64.0
Potri.004G041700 Populus trichocarpa HOM05D006296 ORTHO05D007777 8.2e-49 197.2 142 68.3
Eucgr.D00634 Eucalyptus grandis HOM05D006296 ORTHO05D007777 1.4e-48 196.4 137 66.4
Nn1g04048 Nelumbo nucifera HOM05D006296 ORTHO05D007777 1.8e-48 196.1 145 62.1
SGA_v2.0_scaffold49G18290 Striga asiatica HOM05D006296 ORTHO05D007777 3.1e-48 195.3 143 63.6
Prupe.4G044900 Prunus persica HOM05D006296 ORTHO05D007777 5.9e-47 191.0 108 73.1
FAN21G3093 Fragaria x ananassa HOM05D006296 ORTHO05D007777 7.7e-47 190.7 108 71.3
Rhsim13G0176800 Rhododendron simsii HOM05D006296 ORTHO05D007777 1.3e-46 189.9 115 73.0
RcHm_v2.0_Chr5g0008131 Rosa chinensis HOM05D006296 ORTHO05D007777 1.3e-46 189.9 137 62.0
Atru.chr10.1908 Acer truncatum HOM05D006296 ORTHO05D007777 3.8e-46 188.3 140 62.9
CANSAT35G0041 Cannabis sativa HOM05D006296 ORTHO05D007777 3.8e-46 188.3 137 65.0
MD10G1295500 Malus domestica HOM05D006296 ORTHO05D007777 3.8e-46 188.3 143 60.1
MD05G1314200 Malus domestica HOM05D006296 ORTHO05D007777 5.0e-46 188.0 136 61.0
FvH4_3g09420 Fragaria vesca HOM05D006296 ORTHO05D007777 6.5e-46 187.6 137 61.3
Os04g0680300 Oryza sativa ssp. japonica HOM05D006296 ORTHO05D007777 8.5e-46 187.2 139 65.5
MSTRG.15892 Avicennia marina HOM05D006296 ORTHO05D007777 5.5e-45 184.5 145 55.9
FAN11G0154 Fragaria x ananassa HOM05D006296 ORTHO05D007777 1.2e-44 183.3 116 66.4
Nitab4.5_0002158g0020 Nicotiana tabacum HOM05D006296 ORTHO05D007777 1.2e-44 183.3 106 68.9
Migut.M01153 Erythranthe guttata HOM05D006296 ORTHO05D007777 1.6e-44 183.0 143 56.6
FAN08G1739 Fragaria x ananassa HOM05D006296 ORTHO05D007777 2.1e-44 182.6 133 61.7
SalBow7G3743 Salvia bowleyana HOM05D006296 ORTHO05D007777 4.6e-44 181.4 173 50.9
DCAR_018474 Daucus carota HOM05D006296 ORTHO05D007777 6.1e-44 181.0 123 65.9
Peaxi162Scf00530g00219 Petunia axillaris HOM05D006296 ORTHO05D007777 1.1e-42 176.8 182 48.4
CiPaw.09G058300 Carya illinoinensis HOM05D006296 ORTHO05D007777 2.0e-42 176.0 137 59.1
Nn1g06589 Nelumbo nucifera HOM05D006296 ORTHO05D007777 4.3e-42 174.9 91 78.0
PSO541G0808 Papaver somniferum HOM05D006296 ORTHO05D007777 5.7e-42 174.5 176 49.4
Solyc02g078430.3 Solanum lycopersicum HOM05D006296 ORTHO05D007777 7.4e-42 174.1 106 64.2
Zm00001eb065930 Zea mays HOM05D006296 ORTHO05D007777 9.7e-42 173.7 141 58.9
Sopen02g023280 Solanum pennellii HOM05D006296 ORTHO05D007777 1.3e-41 173.3 106 64.2
FAN18G2724 Fragaria x ananassa HOM05D006296 ORTHO05D007777 1.7e-41 172.9 149 55.0
HPP92_014805 Vanilla planifolia HOM05D006296 ORTHO05D007777 2.2e-41 172.6 142 54.2
unitig_22.g6746 Utricularia gibba HOM05D006296 ORTHO05D007777 3.7e-41 171.8 107 61.7
VMungo0540G1954 Vigna mungo HOM05D006296 ORTHO05D007777 1.4e-40 169.9 129 58.1
CAN.G1164.13 Capsicum annuum HOM05D006296 ORTHO05D007777 2.6e-39 165.6 125 56.0
PGR004G1731 Punica granatum HOM05D006296 ORTHO05D007777 2.6e-39 165.6 137 56.9
Nitab4.5_0005954g0020 Nicotiana tabacum HOM05D006296 ORTHO05D007777 1.7e-38 162.9 106 64.2
Phvul.002G228000 Phaseolus vulgaris HOM05D006296 ORTHO05D007777 2.2e-38 162.5 141 56.0
Ciclev10017521m.g Citrus clementina HOM05D006296 ORTHO05D007777 9.4e-37 157.1 78 82.1
Migut.H01493 Erythranthe guttata HOM05D006296 ORTHO05D007777 1.2e-36 156.8 104 53.8
Peaxi162Scf00736g00313 Petunia axillaris HOM05D006296 ORTHO05D007777 1.2e-36 156.8 106 63.2
Oeu005074.1 Olea europaea HOM05D006296 ORTHO05D007777 3.6e-36 155.2 123 62.6
Lj2A287T56 Lonicera japonica HOM05D006296 ORTHO05D007777 3.9e-35 151.8 115 60.9
Sed0007841 Sechium edule HOM05D006296 ORTHO05D007777 8.8e-35 150.6 128 54.7
arahy.Tifrunner.gnm1.ann1.F25ZWM Arachis hypogaea HOM05D006296 ORTHO05D007777 1.7e-33 146.4 78 73.1
ATR0680G190 Amborella trichopoda HOM05D006296 ORTHO05D007777 1.1e-32 143.7 119 58.8
Sabra11G0035100 Salix brachista HOM05D006296 ORTHO05D007777 3.1e-32 142.1 152 50.7
Actinidia25618 Actinidia chinensis HOM05D006296 ORTHO05D007777 3.5e-31 138.7 90 68.9
GSVIVG01002932001 Vitis vinifera HOM05D006296 ORTHO05D007777 4.5e-31 138.3 82 69.5
AUR62016993 Chenopodium quinoa HOM05D006296 ORTHO05D007777 1.3e-25 120.2 93 62.4
AUR62014802 Chenopodium quinoa HOM05D006296 ORTHO05D007777 1.7e-25 119.8 93 61.3
COL.COLO4_31494 Corchorus olitorius HOM05D005098 ORTHO05D006646 2.2e-25 119.4 92 63.0
Actinidia07582 Actinidia chinensis HOM05D006296 ORTHO05D007777 4.8e-25 118.2 65 75.4
Sabra04G0025800 Salix brachista HOM05D006296 ORTHO05D007777 6.3e-25 117.9 98 60.2
ClCG00G005210 Citrullus lanatus HOM05D006296 ORTHO05D007777 2.4e-24 115.9 100 56.0
ClCG01G022900 Citrullus lanatus HOM05D006296 ORTHO05D007777 2.4e-24 115.9 100 56.0
FvH4_5g20990 Fragaria vesca HOM05D006296 ORTHO05D007777 1.3e-22 110.2 101 54.5
AagrBONN_evm.TU.Sc2ySwM_362.1174 Anthoceros agrestis HOM05D006296 ORTHO05D007777 6.5e-22 107.8 103 46.6
CDE04G3708 Ceratophyllum demersum HOM05D006296 ORTHO05D007777 1.4e-19 100.1 62 67.7
PGSC0003DMG400022442 Solanum tuberosum HOM05D006296 ORTHO05D007777 1.2e-15 87.0 56 62.5
Sed0020533 Sechium edule HOM05D006296 ORTHO05D007777 2.0e-15 86.3 63 54.0
C07p51340 Brassica napus HOM05D006296 ORTHO05D007777 3.6e-12 75.5 62 79.0
BolC7t45633H Brassica oleracea HOM05D006296 ORTHO05D007777 3.0e-11 72.4 61 78.7
Haze_06487 Corylus avellana HOM05D006296 ORTHO05D007777 2.6e-10 69.3 38 76.3
Cpa.g.sc27.57 Carica papaya HOM05D006296 ORTHO05D007777 1.3e-06 57.0 63 47.6
CSS0025334 Camellia sinensis var. sinensis HOM05D006296 ORTHO05D007777 2.9e-06 55.8 29 75.9
MBI18_g17001_MAGBIO Magnolia biondii HOM05D006296 ORTHO05D007777 8.6e-06 54.3 61 54.1


User provided reference genes

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