Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
A01p04400 Brassica napus HOM05D009953 ORTHO05D003195 4.9e-97 357.8 187 100.0
BraA01t00428Z Brassica rapa HOM05D009953 ORTHO05D003195 6.1e-63 244.6 157 83.4
C01p04800 Brassica napus HOM05D009953 ORTHO05D003195 8.8e-62 240.7 157 83.4
BcaNung03785 Brassica carinata HOM05D009953 ORTHO05D003195 1.4e-54 216.9 172 72.7
BolC1t00464H Brassica oleracea HOM05D009953 ORTHO05D003195 1.4e-54 216.9 172 72.7
BcaC01g00943 Brassica carinata HOM05D009953 ORTHO05D003195 4.7e-39 165.2 180 59.4
BolC3t20907H Brassica oleracea HOM05D009953 ORTHO05D003195 4.7e-39 165.2 180 59.4
BcaB03g11864 Brassica carinata HOM05D009953 ORTHO05D003195 1.8e-38 163.3 170 67.1
BcaNung03354 Brassica carinata HOM05D000546 ORTHO05D000398 8.9e-38 161.0 163 61.3
C07p60100 Brassica napus HOM05D009953 ORTHO05D003195 1.2e-37 160.6 165 60.0
Thhalv10026267m.g Eutrema salsugineum HOM05D009953 ORTHO05D003195 1.2e-37 160.6 165 61.2
BolC7t46450H Brassica oleracea HOM05D009953 ORTHO05D003195 7.5e-37 157.9 165 59.4
Sp7g31710 Schrenkiella parvula HOM05D009953 ORTHO05D003195 3.7e-36 155.6 193 57.0
Sp7g31720 Schrenkiella parvula HOM05D009953 ORTHO05D003195 8.3e-36 154.5 197 54.3
C03p86190 Brassica napus HOM05D009953 ORTHO05D003195 7.0e-35 151.4 174 56.9
AL7G17410 Arabidopsis lyrata HOM05D009953 ORTHO05D003195 1.6e-34 150.2 146 65.8
A08p17220 Brassica napus HOM05D009953 ORTHO05D003195 3.0e-33 146.0 159 61.0
BraA08t33685Z Brassica rapa HOM05D009953 ORTHO05D003195 3.0e-33 146.0 159 61.0
BraA03t15320Z Brassica rapa HOM05D009953 ORTHO05D003195 2.5e-32 142.9 165 55.8
A03p62520 Brassica napus HOM05D009953 ORTHO05D003195 3.3e-32 142.5 165 56.4
AT4G33980 Arabidopsis thaliana HOM05D009953 ORTHO05D003195 7.3e-32 141.4 133 66.2
Aa31LG2G16400 Aethionema arabicum HOM05D009953 ORTHO05D003195 9.5e-32 141.0 185 51.9
CARHR242110 Cardamine hirsuta HOM05D009953 ORTHO05D003195 2.9e-28 129.4 116 66.4
Carub.0007s0642 Capsella rubella HOM05D009953 ORTHO05D003195 7.0e-27 124.8 161 55.3
THA.LOC104819577 Tarenaya hassleriana HOM05D009953 ORTHO05D003195 1.5e-16 90.5 129 45.7
THA.LOC104807270 Tarenaya hassleriana HOM05D009953 ORTHO05D003195 2.2e-12 76.6 127 43.3
Cpa.g.sc62.6 Carica papaya HOM05D003792 ORTHO05D003195 3.7e-12 75.9 142 34.5
Dinv15716 Davidia involucrata HOM05D003792 ORTHO05D003195 1.5e-08 63.9 103 39.8
vmacro02043 Vaccinium macrocarpon HOM05D003792 ORTHO05D003195 1.5e-08 63.9 73 46.6
Dinv42162 Davidia involucrata HOM05D003792 ORTHO05D003195 1.9e-08 63.5 128 38.3
GSVIVG01031734001 Vitis vinifera HOM05D003792 ORTHO05D003195 1.9e-08 63.5 102 39.2
AT5G42900 Arabidopsis thaliana HOM05D003792 ORTHO05D003195 9.6e-08 61.2 130 33.1
AL8G18050 Arabidopsis lyrata HOM05D003792 ORTHO05D003195 1.6e-07 60.5 63 46.0
Prupe.8G126300 Prunus persica HOM05D003792 ORTHO05D003195 2.1e-07 60.1 91 39.6
Carub.0008s0601 Capsella rubella HOM05D003792 ORTHO05D003195 2.8e-07 59.7 164 31.7
CSS0036112 Camellia sinensis var. sinensis HOM05D003792 ORTHO05D003195 3.6e-07 59.3 74 43.2
Ah.11g043080 Amaranthus hybridus HOM05D003792 ORTHO05D003195 4.7e-07 58.9 67 43.3
Sabra02G0098600 Salix brachista HOM05D000207 ORTHO05D003195 4.7e-07 58.9 119 33.6
PSO210G6487 Papaver somniferum HOM05D003792 ORTHO05D003195 8.1e-07 58.2 78 42.3
Thecc.02G101400 Theobroma cacao HOM05D003792 ORTHO05D003195 1.1e-06 57.8 69 43.5
FAN15G1261 Fragaria x ananassa HOM05D003792 ORTHO05D003195 1.4e-06 57.4 85 38.8
RcHm_v2.0_Chr6g0307971 Rosa chinensis HOM05D003792 ORTHO05D003195 1.4e-06 57.4 75 38.7
Gohir.A05G202700 Gossypium hirsutum HOM05D003792 ORTHO05D003195 3.1e-06 56.2 115 31.3
Lsat_1_v5_gn_6_111920 Lactuca sativa HOM05D003792 ORTHO05D003195 4.0e-06 55.8 85 40.0
CDE04G2954 Ceratophyllum demersum HOM05D000925 ORTHO05D002746 6.8e-06 55.1 125 30.4
FvH4_2g34400 Fragaria vesca HOM05D003792 ORTHO05D003195 6.8e-06 55.1 77 37.7
Gohir.A12G023800 Gossypium hirsutum HOM05D003792 ORTHO05D003195 6.8e-06 55.1 77 40.3
Gohir.D01G108300 Gossypium hirsutum HOM05D003792 ORTHO05D003195 6.8e-06 55.1 65 47.7
MD15G1082300 Malus domestica HOM05D003792 ORTHO05D003195 6.8e-06 55.1 77 39.0
COL.COLO4_32649 Corchorus olitorius HOM05D003465 ORTHO05D004034 8.9e-06 54.7 98 38.8
Manes.18G037600 Manihot esculenta HOM05D003792 ORTHO05D003195 8.9e-06 54.7 115 34.8
Oeu025580.1 Olea europaea HOM05D003792 ORTHO05D003195 8.9e-06 54.7 117 35.0


User provided reference genes

Program Settings