Interactive Phylogenetics Module

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If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
A01p01480 Brassica napus HOM05D004966 ORTHO05D006199 0.0e+00 1566.6 1036 100.0
BraA01t00142Z Brassica rapa HOM05D004966 ORTHO05D006199 0.0e+00 1519.6 1045 94.4
C01p01650 Brassica napus HOM05D004966 ORTHO05D006199 0.0e+00 1439.1 1061 93.8
BolC1t00159H Brassica oleracea HOM05D004966 ORTHO05D006199 0.0e+00 1432.9 1061 93.6
BcaNung05081 Brassica carinata HOM05D004966 ORTHO05D006199 0.0e+00 1377.5 1050 91.4
BcaNung03662 Brassica carinata HOM05D004966 ORTHO05D006199 0.0e+00 1368.2 1021 93.7
Carub.0007s0282 Capsella rubella HOM05D004966 ORTHO05D006199 0.0e+00 1267.3 1078 84.0
AL7G13330 Arabidopsis lyrata HOM05D004966 ORTHO05D006199 0.0e+00 1249.2 1055 84.9
AT4G37460 Arabidopsis thaliana HOM05D004966 ORTHO05D006199 0.0e+00 1204.9 1058 83.4
Aa31LG6G14330 Aethionema arabicum HOM05D004966 ORTHO05D006199 0.0e+00 1188.7 1084 81.2
CARHR245860 Cardamine hirsuta HOM05D004966 ORTHO05D006199 0.0e+00 1188.3 1064 81.9
THA.LOC104807611 Tarenaya hassleriana HOM05D004966 ORTHO05D006199 4.2e-307 1058.1 1077 73.9
Thhalv10024286m.g Eutrema salsugineum HOM05D004966 ORTHO05D006199 4.7e-282 974.9 912 84.4
Gorai.007G220700 Gossypium raimondii HOM05D004966 ORTHO05D006199 2.2e-263 912.9 1114 66.2
Actinidia32817 Actinidia chinensis HOM05D004966 ORTHO05D006199 2.9e-263 912.5 1070 66.8
Atru.chr3.210 Acer truncatum HOM05D004966 ORTHO05D006199 1.1e-262 910.6 1105 66.6
Nitab4.5_0000868g0040 Nicotiana tabacum HOM05D004966 ORTHO05D006199 1.9e-262 909.8 1066 66.1
Thecc.01G067600 Theobroma cacao HOM05D004966 ORTHO05D006199 2.7e-261 906.0 1101 67.0
Gohir.A11G217900 Gossypium hirsutum HOM05D004966 ORTHO05D006199 4.6e-261 905.2 1108 66.3
Gohir.D11G205500 Gossypium hirsutum HOM05D004966 ORTHO05D006199 1.7e-260 903.3 1114 65.8
Prupe.6G225100 Prunus persica HOM05D004966 ORTHO05D006199 3.9e-260 902.1 1063 68.1
Duzib147G1627 Durio zibethinus HOM05D004966 ORTHO05D006199 7.3e-259 897.9 1112 65.9
Hma1.2p1_0017F.1_g012040 Hydrangea macrophylla HOM05D004966 ORTHO05D006199 1.6e-258 896.7 1048 68.3
Solyc02g092780.3 Solanum lycopersicum HOM05D004966 ORTHO05D006199 3.1e-257 892.5 1060 67.0
TPR.G20946 Trifolium pratense HOM05D004966 ORTHO05D006199 5.3e-257 891.7 1043 68.4
Sopen02g037320 Solanum pennellii HOM05D004966 ORTHO05D006199 2.0e-256 889.8 1062 65.7
Cfa004090 Carpinus fangiana HOM05D004966 ORTHO05D006199 7.6e-256 887.9 1062 67.9
Manes.12G112800 Manihot esculenta HOM05D004966 ORTHO05D006199 9.9e-256 887.5 1096 66.1
PGR004G2163 Punica granatum HOM05D004966 ORTHO05D006199 1.7e-255 886.7 1048 67.7
COL.COLO4_11522 Corchorus olitorius HOM05D004966 ORTHO05D006199 2.2e-255 886.3 1126 65.7
Glyma.17G164600 Glycine max HOM05D004966 ORTHO05D006199 2.9e-255 885.9 1047 66.4
Ca_24712_v3 Cicer arietinum L. HOM05D004966 ORTHO05D006199 4.9e-255 885.2 1050 67.3
Ca_24727_v3 Cicer arietinum L. HOM05D004966 ORTHO05D006199 4.9e-255 885.2 1050 67.3
MD02G1181200 Malus domestica HOM05D004966 ORTHO05D006199 1.4e-254 883.6 1058 66.4
Cc07_g06700 Coffea canephora HOM05D004966 ORTHO05D006199 3.2e-254 882.5 1067 65.6
CANSAT01G2710 Cannabis sativa HOM05D004966 ORTHO05D006199 4.2e-254 882.1 1042 67.8
Potri.007G052200 Populus trichocarpa HOM05D004966 ORTHO05D006199 3.5e-253 879.0 1106 66.2
Rhsim08G0096300 Rhododendron simsii HOM05D004966 ORTHO05D006199 4.6e-253 878.6 1085 65.8
Glyma.05G102400 Glycine max HOM05D004966 ORTHO05D006199 7.9e-253 877.9 1046 66.5
Phvul.003G238000 Phaseolus vulgaris HOM05D004966 ORTHO05D006199 5.1e-252 875.2 1064 65.4
VMungo0251G2147 Vigna mungo HOM05D004966 ORTHO05D006199 5.1e-252 875.2 1043 66.4
Medtr5g016190 Medicago truncatula HOM05D004966 ORTHO05D006199 8.7e-252 874.4 1048 67.2
Eucgr.I00728 Eucalyptus grandis HOM05D004966 ORTHO05D006199 1.1e-251 874.0 1059 67.0
RcHm_v2.0_Chr2g0107271 Rosa chinensis HOM05D004966 ORTHO05D006199 1.1e-251 874.0 1090 65.6
Lj2g0010110 Lotus japonicus HOM05D004966 ORTHO05D006199 2.5e-251 872.8 1047 66.8
Ciclev10024760m.g Citrus clementina HOM05D004966 ORTHO05D006199 3.3e-251 872.5 1108 65.0
CsaV3_6G043790 Cucumis sativus L. HOM05D004966 ORTHO05D006199 3.3e-251 872.5 1058 66.4
Glyma.01G191100 Glycine max HOM05D004966 ORTHO05D006199 3.3e-251 872.5 1055 66.4
Nn5g30492 Nelumbo nucifera HOM05D004966 ORTHO05D006199 5.6e-251 871.7 1040 67.5
Hund16378 Selenicereus undatus HOM05D004966 ORTHO05D006199 1.3e-250 870.5 1041 66.6
CSS0024631 Camellia sinensis var. sinensis HOM05D004966 ORTHO05D006199 9.0e-249 864.4 1096 66.1
Oeu013276.1 Olea europaea HOM05D004966 ORTHO05D006199 1.5e-248 863.6 1041 55.5
Sed0025120 Sechium edule HOM05D004966 ORTHO05D006199 4.5e-248 862.1 1056 65.2
TWI09G0336 Tripterygium wilfordii HOM05D004966 ORTHO05D006199 2.2e-247 859.8 1113 64.6
TAR625G0217 Trochodendron aralioides HOM05D004966 ORTHO05D006199 1.9e-246 856.7 1033 66.5
Sabra07G0045800 Salix brachista HOM05D004966 ORTHO05D006199 2.5e-246 856.3 1108 65.1
arahy.Tifrunner.gnm1.ann1.138YHT Arachis hypogaea HOM05D004966 ORTHO05D006199 3.2e-246 855.9 1059 63.9
ECA238G2979 Erigeron canadensis HOM05D004966 ORTHO05D006199 2.5e-243 846.3 1063 64.7
Haze_15324 Corylus avellana HOM05D004966 ORTHO05D006199 3.3e-243 845.9 1062 65.9
EL10Ac6g15665 Beta vulgaris HOM05D004966 ORTHO05D006199 5.7e-243 845.1 1038 66.1
arahy.Tifrunner.gnm1.ann1.EHFU3U Arachis hypogaea HOM05D004966 ORTHO05D006199 9.6e-243 844.3 1048 66.0
Sc16g0004960 Simmondsia chinensis HOM05D004966 ORTHO05D006199 2.8e-242 842.8 1050 65.1
GSVIVG01000163001 Vitis vinifera HOM05D004966 ORTHO05D006199 1.8e-241 840.1 1035 67.3
Lj4g0015306 Lotus japonicus HOM05D004966 ORTHO05D006199 7.6e-240 834.7 1053 64.8
arahy.Tifrunner.gnm1.ann1.E3XCDG Arachis hypogaea HOM05D004966 ORTHO05D006199 3.8e-239 832.4 1051 65.7
Lalb_Chr05g0226061 Lupinus albus HOM05D004966 ORTHO05D006199 5.0e-239 832.0 1042 66.3
FvH4_1g17100 Fragaria vesca HOM05D004966 ORTHO05D006199 1.4e-238 830.5 1082 64.3
Migut.H00376 Erythranthe guttata HOM05D004966 ORTHO05D006199 3.2e-238 829.3 1044 64.8
FAN19G1580 Fragaria x ananassa HOM05D004966 ORTHO05D006199 4.2e-238 828.9 1082 64.1
Duzib187G0681 Durio zibethinus HOM05D004966 ORTHO05D006199 5.5e-238 828.6 1110 64.4
DCAR_010836 Daucus carota HOM05D004966 ORTHO05D006199 7.1e-238 828.2 1081 63.5
TWI73G0630 Tripterygium wilfordii HOM05D004966 ORTHO05D006199 2.7e-237 826.2 1108 62.6
Aqoxy6G02774 Aquilegia oxysepala HOM05D004966 ORTHO05D006199 3.7e-234 815.8 1041 63.4
PSO541G4192 Papaver somniferum HOM05D004966 ORTHO05D006199 8.2e-234 814.7 1047 63.6
MSTRG.23699 Avicennia marina HOM05D004966 ORTHO05D006199 3.1e-233 812.8 1055 63.4
HanXRQChr14g0441841 Helianthus annuus HOM05D004966 ORTHO05D006199 6.5e-231 805.1 1046 64.7
PSO675G4881 Papaver somniferum HOM05D004966 ORTHO05D006199 8.5e-231 804.7 1047 63.1
Lsat_1_v5_gn_2_83581 Lactuca sativa HOM05D004966 ORTHO05D006199 1.9e-230 803.5 1031 65.9
SGA_v2.0_scaffold15G07400 Striga asiatica HOM05D004966 ORTHO05D006199 1.9e-230 803.5 1131 44.3
FAN26G1585 Fragaria x ananassa HOM05D004966 ORTHO05D006199 7.2e-230 801.6 1071 63.6
FAN28G1348 Fragaria x ananassa HOM05D004966 ORTHO05D006199 1.2e-229 800.8 1071 63.7
CAN.G1075.3 Capsicum annuum HOM05D004966 ORTHO05D006199 5.7e-227 792.0 536 69.8
Nitab4.5_0001439g0170 Nicotiana tabacum HOM05D004966 ORTHO05D006199 9.7e-227 791.2 1060 62.5
vmacro17983 Vaccinium macrocarpon HOM05D004966 ORTHO05D006199 1.7e-226 790.4 1212 41.9
MELO3C007603.2 Cucumis melo HOM05D004966 ORTHO05D006199 5.3e-225 785.4 1068 57.0
AUR62038275 Chenopodium quinoa HOM05D004966 ORTHO05D006199 6.9e-225 785.0 1054 62.1
arahy.Tifrunner.gnm1.ann1.E99DR7 Arachis hypogaea HOM05D004966 ORTHO05D006199 6.5e-223 778.5 1045 63.2
Lj4C159G2 Lonicera japonica HOM05D004966 ORTHO05D006199 1.4e-222 777.3 1060 60.8
AUR62003963 Chenopodium quinoa HOM05D004966 ORTHO05D006199 1.6e-221 773.9 1040 63.6
CiPaw.01G008200 Carya illinoinensis HOM05D004966 ORTHO05D006199 5.1e-220 768.8 486 75.5
MD15G1292200 Malus domestica HOM05D004966 ORTHO05D006199 2.4e-217 760.0 537 67.6
Phvul.002G013932 Phaseolus vulgaris HOM05D004966 ORTHO05D006199 2.4e-217 760.0 537 69.1
Psat2g169880 Pisum sativum HOM05D004966 ORTHO05D006199 2.6e-208 729.9 914 67.3
ClCG01G017250 Citrullus lanatus HOM05D004966 ORTHO05D006199 5.9e-208 728.8 1063 61.3
Peaxi162Scf00264g00044 Petunia axillaris HOM05D004966 ORTHO05D006199 7.2e-206 721.8 985 58.7
Os07g0113700 Oryza sativa ssp. japonica HOM05D004966 ORTHO05D006199 3.0e-204 716.5 1036 57.2
MBI16_g06665_MAGBIO Magnolia biondii HOM05D004966 ORTHO05D006199 3.7e-202 709.5 490 69.8
Zm00001eb118220 Zea mays HOM05D004966 ORTHO05D006199 5.9e-200 702.2 1035 52.9
CSS0020625 Camellia sinensis var. sinensis HOM05D004966 ORTHO05D006199 2.9e-199 699.9 825 60.0
Dinv30059 Davidia involucrata HOM05D004966 ORTHO05D006199 2.1e-197 693.7 922 67.7
SEGI_23316 Sequoiadendron giganteum HOM05D004966 ORTHO05D006199 1.1e-193 681.4 1038 59.4
ATR0661G243 Amborella trichopoda HOM05D004966 ORTHO05D006199 3.9e-175 619.8 484 62.8
Sp7g35120 Schrenkiella parvula HOM05D004966 ORTHO05D006199 4.0e-172 609.8 696 79.2
BolC7t46655H Brassica oleracea HOM05D004966 ORTHO05D006199 7.1e-161 572.4 886 48.4
unitig_62.g23418 Utricularia gibba HOM05D004966 ORTHO05D006199 3.2e-153 547.0 972 51.7
TAR381G1622 Trochodendron aralioides HOM05D004966 ORTHO05D006199 4.2e-145 520.0 828 64.5
Mapoly0153s0004 Marchantia polymorpha HOM05D004966 ORTHO05D006199 1.5e-139 501.5 1036 49.1
Ah.03g146320 Amaranthus hybridus HOM05D004966 ORTHO05D006199 1.5e-131 474.9 438 57.5
Pp3c2_36070 Physcomitrium patens HOM05D004966 ORTHO05D006199 4.2e-129 466.8 1035 41.8
C07p62400 Brassica napus HOM05D004966 ORTHO05D006199 6.7e-127 459.5 885 42.1
Lalb_Chr16g0389071 Lupinus albus HOM05D004966 ORTHO05D006199 5.5e-121 439.9 781 63.9
Lalb_Chr16g0389061 Lupinus albus HOM05D004966 ORTHO05D006199 1.3e-106 392.1 254 69.7
CBR_g36368 Chara braunii HOM05D004966 ORTHO05D006199 1.2e-96 359.0 541 38.6
BcaNung02943 Brassica carinata HOM05D004966 ORTHO05D006199 8.5e-90 336.3 176 92.0
Cpa.g.sc1082.1 Carica papaya HOM05D004966 ORTHO05D006199 2.4e-84 318.2 203 71.4
Dinv26891 Davidia involucrata HOM05D004966 ORTHO05D006199 6.5e-82 310.1 206 68.9
Cre01.g021450 Chlamydomonas reinhardtii HOM05D004966 ORTHO05D006199 2.1e-72 278.5 449 37.0
BcaNung02944 Brassica carinata HOM05D004966 ORTHO05D006199 2.5e-65 255.0 133 90.2
CAN.G1075.4 Capsicum annuum HOM05D004966 ORTHO05D006199 1.5e-62 245.7 341 45.7
MD15G1292300 Malus domestica HOM05D004966 ORTHO05D006199 2.4e-60 238.4 326 47.9
Duzib264G0118 Durio zibethinus HOM05D004966 ORTHO05D006199 7.8e-59 233.4 267 50.6
A03p65150 Brassica napus HOM05D004966 ORTHO05D006199 5.6e-49 200.7 130 80.0
BraA03t15573Z Brassica rapa HOM05D004966 ORTHO05D006199 1.2e-48 199.5 130 79.2
BcaNung02055 Brassica carinata HOM05D004966 ORTHO05D006199 8.1e-48 196.8 841 36.6
FAN23G2362 Fragaria x ananassa HOM05D004966 ORTHO05D006199 3.1e-47 194.9 327 41.9
CiPaw.01G008100 Carya illinoinensis HOM05D004966 ORTHO05D006199 1.0e-42 179.9 322 41.3
Cpa.g.sc6.59 Carica papaya HOM05D004966 ORTHO05D006199 9.6e-41 173.3 122 71.3
Cpa.g.sc6.60 Carica papaya HOM05D004966 ORTHO05D006199 6.9e-39 167.2 99 77.8
BcaNung02945 Brassica carinata HOM05D004966 ORTHO05D006199 4.4e-38 164.5 93 87.1
CSS0022043 Camellia sinensis var. sinensis HOM05D004966 ORTHO05D006199 1.5e-33 149.4 109 70.6
CSS0040429 Camellia sinensis var. sinensis HOM05D004966 ORTHO05D006199 4.3e-33 147.9 93 75.3
Glyma.11G051133 Glycine max HOM05D004966 ORTHO05D006199 2.1e-32 145.6 185 43.8
Ah.03g146310 Amaranthus hybridus HOM05D004966 ORTHO05D006199 4.0e-31 141.4 93 69.9
Glyma.11G051067 Glycine max HOM05D004966 ORTHO05D006199 4.6e-27 127.9 119 59.7
CSS0006661 Camellia sinensis var. sinensis HOM05D004966 ORTHO05D006199 1.3e-24 119.8 75 66.7
RcHm_v2.0_Chr1g0315291 Rosa chinensis HOM05D004966 ORTHO05D006199 1.8e-23 115.9 76 76.3
BcaC09g51691 Brassica carinata HOM05D003801 ORTHO05D017532 2.6e-22 112.1 129 58.9
Oeu011609.3 Olea europaea HOM05D004966 ORTHO05D006199 1.8e-18 99.4 133 42.9
Phvul.002G013866 Phaseolus vulgaris HOM05D004966 ORTHO05D006199 1.3e-16 93.2 185 39.5
ATR0030G036 Amborella trichopoda HOM05D004966 ORTHO05D006199 1.3e-10 73.2 120 35.8
CBR_g36362 Chara braunii HOM05D004966 ORTHO05D006199 5.7e-09 67.8 203 31.0
Lsat_1_v5_gn_8_118440 Lactuca sativa HOM05D004966 ORTHO05D231273 3.1e-07 62.0 49 53.1
CSS0012173 Camellia sinensis var. sinensis HOM05D004966 ORTHO05D006199 5.3e-07 61.2 61 50.8
CSS0024681 Camellia sinensis var. sinensis HOM05D004966 ORTHO05D006199 4.5e-06 58.2 43 65.1


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