Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
A01p00960 Brassica napus HOM05D004390 ORTHO05D004950 2.0e-43 178.7 92 100.0
BraA01t00094Z Brassica rapa HOM05D004390 ORTHO05D004950 2.0e-43 178.7 92 100.0
BcaNung00935 Brassica carinata HOM05D004390 ORTHO05D004950 3.8e-42 174.5 92 96.7
BolC1t00106H Brassica oleracea HOM05D004390 ORTHO05D004950 5.0e-42 174.1 92 96.7
Thhalv10027263m.g Eutrema salsugineum HOM05D004390 ORTHO05D004950 2.7e-40 168.3 92 92.4
AL7G12360 Arabidopsis lyrata HOM05D004390 ORTHO05D004950 1.1e-38 162.9 93 92.5
Sp7g35820 Schrenkiella parvula HOM05D004390 ORTHO05D004950 1.5e-38 162.5 92 90.2
Carub.0007s0202 Capsella rubella HOM05D004390 ORTHO05D004950 2.6e-38 161.8 93 91.4
Aa31LG7G14400 Aethionema arabicum HOM05D004390 ORTHO05D004950 1.1e-36 156.4 92 85.9
Aa31LG7G15420 Aethionema arabicum HOM05D004390 ORTHO05D004950 1.4e-36 156.0 92 84.8
CARHR246620 Cardamine hirsuta HOM05D004390 ORTHO05D004950 5.3e-36 154.1 91 87.9
CARHR113610 Cardamine hirsuta HOM05D004390 ORTHO05D004950 1.6e-35 152.5 92 81.5
Aa31LG6G15170 Aethionema arabicum HOM05D004390 ORTHO05D004950 4.5e-35 151.0 92 82.6
SpUn0131_0010 Schrenkiella parvula HOM05D004390 ORTHO05D004950 4.5e-35 151.0 93 84.9
AT2G22425 Arabidopsis thaliana HOM05D004390 ORTHO05D004950 5.9e-35 150.6 93 83.9
Duzib248G1577 Durio zibethinus HOM05D004390 ORTHO05D004950 5.9e-35 150.6 92 78.3
Carub.0004s0159 Capsella rubella HOM05D004390 ORTHO05D004950 1.0e-34 149.8 92 81.5
AT4G40042 Arabidopsis thaliana HOM05D004390 ORTHO05D004950 2.2e-34 148.7 82 89.0
AL4G11930 Arabidopsis lyrata HOM05D004390 ORTHO05D004950 2.9e-34 148.3 93 82.8
Gohir.D01G154700 Gossypium hirsutum HOM05D004390 ORTHO05D004950 2.9e-34 148.3 92 77.2
Gorai.002G191500 Gossypium raimondii HOM05D004390 ORTHO05D004950 2.9e-34 148.3 92 77.2
THA.LOC104824895 Tarenaya hassleriana HOM05D004390 ORTHO05D004950 6.5e-34 147.1 92 79.3
Thhalv10000378m.g Eutrema salsugineum HOM05D004390 ORTHO05D004950 1.9e-33 145.6 93 82.8
Gohir.A01G155400 Gossypium hirsutum HOM05D004390 ORTHO05D004950 2.5e-33 145.2 92 76.1
THA.LOC104824892 Tarenaya hassleriana HOM05D004390 ORTHO05D004950 2.5e-33 145.2 92 77.2
THA.LOC104824896 Tarenaya hassleriana HOM05D004390 ORTHO05D004950 2.5e-33 145.2 92 77.2
THA.LOC104824898 Tarenaya hassleriana HOM05D004390 ORTHO05D004950 2.5e-33 145.2 92 78.3
THA.LOC104824890 Tarenaya hassleriana HOM05D004390 ORTHO05D004950 9.4e-33 143.3 92 76.1
Thecc.02G210700 Theobroma cacao HOM05D004390 ORTHO05D004950 9.4e-33 143.3 92 75.0
Manes.12G012800 Manihot esculenta HOM05D004390 ORTHO05D004950 1.2e-32 142.9 93 79.6
Gorai.008G164900 Gossypium raimondii HOM05D004390 ORTHO05D004950 1.6e-32 142.5 91 74.7
Sabra08G0134000 Salix brachista HOM05D004390 ORTHO05D004950 1.6e-32 142.5 95 76.8
Cpa.g.sc34.218 Carica papaya HOM05D004390 ORTHO05D004950 3.6e-32 141.4 92 75.0
Gohir.A12G148600 Gossypium hirsutum HOM05D004390 ORTHO05D004950 3.6e-32 141.4 91 73.6
TWI18G1082 Tripterygium wilfordii HOM05D004390 ORTHO05D004950 3.6e-32 141.4 92 77.2
BraA09t41150Z Brassica rapa HOM05D004390 ORTHO05D004950 4.7e-32 141.0 92 77.2
A09p57580 Brassica napus HOM05D004390 ORTHO05D004950 6.1e-32 140.6 92 77.2
Gohir.D12G152500 Gossypium hirsutum HOM05D004390 ORTHO05D004950 6.1e-32 140.6 92 73.9
CiPaw.06G101400 Carya illinoinensis HOM05D004390 ORTHO05D004950 8.0e-32 140.2 90 76.7
Medtr8g080380 Medicago truncatula HOM05D004390 ORTHO05D004950 8.0e-32 140.2 94 76.6
Atru.chr11.2308 Acer truncatum HOM05D004390 ORTHO05D004950 1.0e-31 139.8 92 78.3
Ca_18042_v3 Cicer arietinum L. HOM05D004390 ORTHO05D004950 1.0e-31 139.8 94 75.5
Haze_10374 Corylus avellana HOM05D004390 ORTHO05D004950 1.0e-31 139.8 92 75.0
Lsat_1_v5_gn_8_149361 Lactuca sativa HOM05D004390 ORTHO05D004950 1.0e-31 139.8 94 72.3
Prupe.1G228300 Prunus persica HOM05D004390 ORTHO05D004950 1.0e-31 139.8 94 76.6
CSS0004094 Camellia sinensis var. sinensis HOM05D004390 ORTHO05D004950 1.4e-31 139.4 94 76.6
CSS0048605 Camellia sinensis var. sinensis HOM05D004390 ORTHO05D004950 1.4e-31 139.4 94 76.6
Medtr3g085510 Medicago truncatula HOM05D004390 ORTHO05D004950 1.4e-31 139.4 94 75.5
BcaB08g35066 Brassica carinata HOM05D004390 ORTHO05D004950 2.3e-31 138.7 93 76.3
C08p40770 Brassica napus HOM05D004390 ORTHO05D004950 2.3e-31 138.7 92 76.1
Potri.008G175775 Populus trichocarpa HOM05D004390 ORTHO05D004950 2.3e-31 138.7 95 74.7
Cfa009329 Carpinus fangiana HOM05D004390 ORTHO05D004950 3.0e-31 138.3 91 74.7
Eucgr.B03484 Eucalyptus grandis HOM05D004390 ORTHO05D004950 3.0e-31 138.3 95 76.8
Psat5g095200 Pisum sativum HOM05D004390 ORTHO05D004950 3.0e-31 138.3 94 74.5
QL03p053718 Quercus lobata HOM05D004390 ORTHO05D004950 3.0e-31 138.3 93 76.3
Actinidia08077 Actinidia chinensis HOM05D001171 ORTHO05D001872 4.0e-31 137.9 93 77.4
ECA233G0624 Erigeron canadensis HOM05D004390 ORTHO05D004950 4.0e-31 137.9 94 72.3
ECA240G0924 Erigeron canadensis HOM05D004390 ORTHO05D004950 4.0e-31 137.9 94 72.3
Dinv14827 Davidia involucrata HOM05D001171 ORTHO05D001872 5.2e-31 137.5 93 74.2
Duzib251G0716 Durio zibethinus HOM05D004390 ORTHO05D004950 5.2e-31 137.5 92 73.9
TWI36G1003 Tripterygium wilfordii HOM05D004390 ORTHO05D004950 6.7e-31 137.1 92 73.9
TWI75G0215 Tripterygium wilfordii HOM05D004390 ORTHO05D004950 8.8e-31 136.7 92 75.0
FvH4_4g23930 Fragaria vesca HOM05D004390 ORTHO05D004950 1.5e-30 136.0 92 73.9
FAN12G2113 Fragaria x ananassa HOM05D006059 ORTHO05D004950 1.5e-30 136.0 92 73.9
Lj4g0026719 Lotus japonicus HOM05D004390 ORTHO05D004950 1.5e-30 136.0 94 76.6
BcaC07g41074 Brassica carinata HOM05D004390 ORTHO05D004950 2.0e-30 135.6 92 75.0
BolC8t51641H Brassica oleracea HOM05D004390 ORTHO05D004950 2.0e-30 135.6 92 75.0
FAN07G0791 Fragaria x ananassa HOM05D004390 ORTHO05D004950 2.0e-30 135.6 92 72.8
FAN17G1207 Fragaria x ananassa HOM05D004390 ORTHO05D004950 2.0e-30 135.6 92 72.8
FAN22G0688 Fragaria x ananassa HOM05D004390 ORTHO05D004950 2.0e-30 135.6 92 72.8
Psat4g014960 Pisum sativum HOM05D004390 ORTHO05D004950 2.0e-30 135.6 94 73.4
GSVIVG01010448001 Vitis vinifera HOM05D004390 ORTHO05D004950 2.6e-30 135.2 92 72.8
CANSAT80G1060 Cannabis sativa HOM05D004390 ORTHO05D004950 3.3e-30 134.8 92 73.9
DCAR_007008 Daucus carota HOM05D004390 ORTHO05D004950 3.3e-30 134.8 92 73.9
Potri.010G059300 Populus trichocarpa HOM05D004390 ORTHO05D004950 3.3e-30 134.8 94 75.5
Actinidia20702 Actinidia chinensis HOM05D004390 ORTHO05D004950 4.4e-30 134.4 93 75.3
THA.LOC109116235 Tarenaya hassleriana HOM05D004390 ORTHO05D004950 4.4e-30 134.4 79 81.0
Phvul.001G260900 Phaseolus vulgaris HOM05D004390 ORTHO05D004950 5.7e-30 134.0 94 70.2
Actinidia09657 Actinidia chinensis HOM05D004390 ORTHO05D004950 7.5e-30 133.7 91 72.5
Lj7E465T0 Lonicera japonica HOM05D004390 ORTHO05D004950 7.5e-30 133.7 93 74.2
HanXRQChr08g0207731 Helianthus annuus HOM05D004390 ORTHO05D004950 9.7e-30 133.3 93 69.9
Hma1.2p1_0065F.1_g035640 Hydrangea macrophylla HOM05D004390 ORTHO05D004950 1.3e-29 132.9 93 72.0
MELO3C011874.2 Cucumis melo HOM05D004390 ORTHO05D004950 1.7e-29 132.5 94 73.4
Glyma.18G007600 Glycine max HOM05D004390 ORTHO05D004950 1.7e-29 132.5 94 71.3
Aqoxy5G03398 Aquilegia oxysepala HOM05D004390 ORTHO05D004950 2.2e-29 132.1 95 71.6
Cc09_g06290 Coffea canephora HOM05D015856 ORTHO05D004950 2.2e-29 132.1 92 72.8
Cc11_g00910 Coffea canephora HOM05D004390 ORTHO05D004950 2.2e-29 132.1 93 73.1
Thhalv10021836m.g Eutrema salsugineum HOM05D004390 ORTHO05D004950 2.2e-29 132.1 91 72.5
Glyma.11G249600 Glycine max HOM05D004390 ORTHO05D004950 2.2e-29 132.1 94 70.2
Nn3g16498 Nelumbo nucifera HOM05D004390 ORTHO05D004950 2.2e-29 132.1 91 70.3
QL12p006243 Quercus lobata HOM05D004390 ORTHO05D004950 2.2e-29 132.1 93 73.1
PGR102G2095 Punica granatum HOM05D004390 ORTHO05D004950 2.8e-29 131.7 95 72.6
ClCG11G013760 Citrullus lanatus HOM05D004390 ORTHO05D004950 3.7e-29 131.3 95 72.6
COL.COLO4_20382 Corchorus olitorius HOM05D001171 ORTHO05D001872 3.7e-29 131.3 93 71.0
Sc11g0000500 Simmondsia chinensis HOM05D004390 ORTHO05D004950 3.7e-29 131.3 91 67.0
Glyma.08G103600 Glycine max HOM05D004390 ORTHO05D004950 6.3e-29 130.6 94 72.3
EL10Ac6g13484 Beta vulgaris HOM05D004390 ORTHO05D004950 8.2e-29 130.2 93 69.9
Duzib268G0993 Durio zibethinus HOM05D004390 ORTHO05D004950 8.2e-29 130.2 92 68.5
Migut.E00025 Erythranthe guttata HOM05D004390 ORTHO05D004950 1.1e-28 129.8 92 68.5
Nitab4.5_0000379g0030 Nicotiana tabacum HOM05D004390 ORTHO05D004950 1.1e-28 129.8 93 67.7
Rhsim10G0039200 Rhododendron simsii HOM05D004390 ORTHO05D004950 1.1e-28 129.8 91 70.3
arahy.Tifrunner.gnm1.ann1.L53BL2 Arachis hypogaea HOM05D004390 ORTHO05D004950 1.4e-28 129.4 87 72.4
CSS0024228 Camellia sinensis var. sinensis HOM05D004390 ORTHO05D004950 1.4e-28 129.4 93 72.0
CsaV3_5G030350 Cucumis sativus L. HOM05D004390 ORTHO05D004950 1.4e-28 129.4 94 71.3
Glyma.05G146700 Glycine max HOM05D004390 ORTHO05D004950 1.4e-28 129.4 94 72.3
Hund25458 Selenicereus undatus HOM05D004390 ORTHO05D004950 1.4e-28 129.4 91 65.9
TAR371G0820 Trochodendron aralioides HOM05D004390 ORTHO05D004950 1.4e-28 129.4 86 72.1
TPR.G28271 Trifolium pratense HOM05D004390 ORTHO05D004950 1.8e-28 129.0 94 72.3
Ah.02g130970 Amaranthus hybridus HOM05D004390 ORTHO05D004950 2.4e-28 128.6 93 66.7
MBI11_g07456_MAGBIO Magnolia biondii HOM05D004390 ORTHO05D004950 2.4e-28 128.6 90 70.0
Nitab4.5_0000367g0030 Nicotiana tabacum HOM05D004390 ORTHO05D004950 2.4e-28 128.6 93 66.7
arahy.Tifrunner.gnm1.ann1.FA6GLZ Arachis hypogaea HOM05D004390 ORTHO05D004950 3.1e-28 128.3 94 71.3
arahy.Tifrunner.gnm1.ann1.CM82MG Arachis hypogaea HOM05D004390 ORTHO05D004950 4.1e-28 127.9 94 71.3
Ca_16468_v3 Cicer arietinum L. HOM05D004390 ORTHO05D004950 4.1e-28 127.9 93 69.9
Peaxi162Scf00128g01124 Petunia axillaris HOM05D004390 ORTHO05D004950 5.3e-28 127.5 92 68.5
Sed0024223 Sechium edule HOM05D004390 ORTHO05D004950 5.3e-28 127.5 94 70.2
Nitab4.5_0002210g0100 Nicotiana tabacum HOM05D004390 ORTHO05D004950 9.1e-28 126.7 93 68.8
Phvul.002G174400 Phaseolus vulgaris HOM05D004390 ORTHO05D004950 9.1e-28 126.7 94 70.2
CAN.G638.34 Capsicum annuum HOM05D004390 ORTHO05D004950 1.2e-27 126.3 93 71.0
TAR622G0138 Trochodendron aralioides HOM05D004390 ORTHO05D004950 1.2e-27 126.3 86 68.6
Nn4g22350 Nelumbo nucifera HOM05D004390 ORTHO05D004950 1.6e-27 125.9 90 67.8
PSO478G0183 Papaver somniferum HOM05D004390 ORTHO05D004950 1.6e-27 125.9 90 67.8
AUR62024125 Chenopodium quinoa HOM05D004390 ORTHO05D004950 2.7e-27 125.2 84 69.0
CARHR089330 Cardamine hirsuta HOM05D004390 ORTHO05D004950 3.5e-27 124.8 80 71.2
Os12g0438900 Oryza sativa ssp. japonica HOM05D004390 ORTHO05D004950 3.5e-27 124.8 91 63.7
PSO017G1102 Papaver somniferum HOM05D004390 ORTHO05D004950 3.5e-27 124.8 90 66.7
Migut.K00715 Erythranthe guttata HOM05D004390 ORTHO05D004950 4.5e-27 124.4 94 66.0
Lsat_1_v5_gn_3_29821 Lactuca sativa HOM05D004390 ORTHO05D004950 4.5e-27 124.4 92 67.4
TAR629G1658 Trochodendron aralioides HOM05D004390 ORTHO05D004950 4.5e-27 124.4 90 68.9
Nitab4.5_0000592g0450 Nicotiana tabacum HOM05D004390 ORTHO05D004950 7.7e-27 123.6 93 68.8
Rhsim12G0027700 Rhododendron simsii HOM05D004390 ORTHO05D004950 1.7e-26 122.5 88 65.9
Oeu058917.1 Olea europaea HOM05D004390 ORTHO05D004950 2.9e-26 121.7 93 65.6
Carub.0003s1416 Capsella rubella HOM05D004390 ORTHO05D004950 3.8e-26 121.3 91 63.7
Zm00001eb218300 Zea mays HOM05D004390 ORTHO05D004950 1.1e-25 119.8 94 61.7
DCAR_031195 Daucus carota HOM05D001171 ORTHO05D006126 1.9e-25 119.0 93 62.4
HPP92_024163 Vanilla planifolia HOM05D000064 ORTHO05D000281 1.9e-25 119.0 93 64.5
HPP92_024177 Vanilla planifolia HOM05D004390 ORTHO05D004950 1.9e-25 119.0 93 64.5
Zm00001eb052740 Zea mays HOM05D004390 ORTHO05D004950 1.9e-25 119.0 94 60.6
MBI13_g26147_MAGBIO Magnolia biondii HOM05D004390 ORTHO05D004950 3.2e-25 118.2 90 64.4
Sopen03g001750 Solanum pennellii HOM05D004390 ORTHO05D004950 5.5e-25 117.5 93 64.5
Ah.03g136230 Amaranthus hybridus HOM05D001171 ORTHO05D006126 7.2e-25 117.1 93 64.5
PSO063G2970 Papaver somniferum HOM05D004390 ORTHO05D004950 7.2e-25 117.1 94 61.7
PSO782G4737 Papaver somniferum HOM05D004390 ORTHO05D004950 9.4e-25 116.7 94 60.6
Lalb_Chr12g0206281 Lupinus albus HOM05D004390 ORTHO05D004950 4.7e-24 114.4 82 74.4
MBI05_g44034_MAGBIO Magnolia biondii HOM05D004390 ORTHO05D004950 6.1e-24 114.0 90 62.2
CiPaw.05G111600 Carya illinoinensis HOM05D004390 ORTHO05D004950 4.0e-23 111.3 78 69.2
ClCG09G006830 Citrullus lanatus HOM05D004390 ORTHO05D004950 4.0e-23 111.3 94 62.8
RcHm_v2.0_Chr4g0430591 Rosa chinensis HOM05D004390 ORTHO05D004950 4.0e-23 111.3 81 70.4
MD13G1117200 Malus domestica HOM05D004390 ORTHO05D004950 8.8e-23 110.2 84 70.2
Lalb_Chr07g0187411 Lupinus albus HOM05D004390 ORTHO05D004950 1.5e-22 109.4 82 68.3
ATR0561G166 Amborella trichopoda HOM05D004390 ORTHO05D004950 2.0e-22 109.0 91 58.2
SEGI_16803 Sequoiadendron giganteum HOM05D004390 ORTHO05D004950 2.6e-22 108.6 101 58.4
ATR1098G064 Amborella trichopoda HOM05D004390 ORTHO05D004950 2.8e-21 105.1 91 58.2
Pp3c4_12150 Physcomitrium patens HOM05D004390 ORTHO05D004950 4.8e-21 104.4 74 67.6
SMO364G0480 Selaginella moellendorffii HOM05D004390 ORTHO05D004950 2.4e-20 102.1 97 54.6
MBI07_g16243_MAGBIO Magnolia biondii HOM05D002351 ORTHO05D004950 5.4e-20 100.9 79 64.6
Pp3c10_14440 Physcomitrium patens HOM05D004390 ORTHO05D004950 4.5e-19 97.8 74 62.2
TPR.G10940 Trifolium pratense HOM05D004390 ORTHO05D004950 1.0e-18 96.7 65 72.3
Solyc03g005740.3 Solanum lycopersicum HOM05D004390 ORTHO05D004950 6.5e-18 94.0 81 60.5
Sp3g12740 Schrenkiella parvula HOM05D004390 ORTHO05D004950 2.5e-17 92.0 61 70.5
Mapoly0041s0086 Marchantia polymorpha HOM05D004390 ORTHO05D004950 3.2e-17 91.7 68 63.2
Manes.13G018500 Manihot esculenta HOM05D004390 ORTHO05D004950 2.6e-14 82.0 72 56.9
CBR_g48133 Chara braunii HOM05D004390 ORTHO05D004950 3.4e-14 81.6 73 53.4
MBI07_g34630_MAGBIO Magnolia biondii HOM05D004390 ORTHO05D004950 3.4e-14 81.6 68 54.4
SMO145G0172 Selaginella moellendorffii HOM05D004390 ORTHO05D004950 3.4e-14 81.6 73 47.9
MCO16G111 Micromonas commoda HOM05D004390 ORTHO05D004950 4.9e-13 77.8 97 43.3
Nn4g24822 Nelumbo nucifera HOM05D002155 ORTHO05D004950 5.9e-11 70.9 72 56.9
Nn1g04852 Nelumbo nucifera HOM05D004390 ORTHO05D004950 1.3e-10 69.7 52 69.2
PRCOL_00005433 Prasinoderma coloniale HOM05D004390 ORTHO05D004950 1.3e-10 69.7 71 42.3
SMO197G0059 Selaginella moellendorffii HOM05D004390 ORTHO05D004950 4.3e-09 64.7 72 44.4
Lalb_Chr22g0358881 Lupinus albus HOM05D004390 ORTHO05D004950 5.6e-09 64.3 39 69.2
Pp3c3_460 Physcomitrium patens HOM05D004390 ORTHO05D004950 1.6e-08 62.8 73 39.7
SEGI_01546 Sequoiadendron giganteum HOM05D007557 ORTHO05D009573 5.2e-07 57.8 69 42.0


User provided reference genes

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