Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
A01p00740 Brassica napus HOM05D006521 ORTHO05D008087 1.2e-158 563.1 279 100.0
BolC3t20094H Brassica oleracea HOM05D006521 ORTHO05D008087 3.0e-106 389.0 277 75.5
A08p23330 Brassica napus HOM05D006521 ORTHO05D008087 5.1e-106 388.3 260 78.1
BraA08t34287Z Brassica rapa HOM05D006521 ORTHO05D008087 5.1e-106 388.3 260 78.1
BcaNung05326 Brassica carinata HOM05D006521 ORTHO05D008087 6.7e-106 387.9 277 75.1
C03p78340 Brassica napus HOM05D006521 ORTHO05D008087 1.5e-105 386.7 261 78.2
Thhalv10025314m.g Eutrema salsugineum HOM05D006521 ORTHO05D008087 5.3e-103 378.3 298 68.1
Carub.0007s0173 Capsella rubella HOM05D006521 ORTHO05D008087 4.5e-102 375.2 283 71.0
AT4G39820 Arabidopsis thaliana HOM05D006521 ORTHO05D008087 1.3e-101 373.6 283 71.4
Sp7g36070 Schrenkiella parvula HOM05D006521 ORTHO05D008087 2.9e-101 372.5 284 70.8
AL7G12040 Arabidopsis lyrata HOM05D006521 ORTHO05D008087 4.9e-101 371.7 281 71.5
CARHR246880 Cardamine hirsuta HOM05D006521 ORTHO05D008087 4.9e-101 371.7 281 71.2
Aa31LG6G15450 Aethionema arabicum HOM05D006521 ORTHO05D008087 1.5e-94 350.1 269 69.9
THA.LOC104824871 Tarenaya hassleriana HOM05D006521 ORTHO05D008087 1.2e-91 340.5 270 66.3
THA.LOC104807700 Tarenaya hassleriana HOM05D006521 ORTHO05D008087 4.6e-91 338.6 263 67.3
C01p00850 Brassica napus HOM05D006521 ORTHO05D008087 1.1e-81 307.4 298 61.7
Cpa.g.sc20.228 Carica papaya HOM05D006521 ORTHO05D008087 5.1e-74 282.0 267 55.4
Duzib147G0857 Durio zibethinus HOM05D006521 ORTHO05D008087 1.1e-73 280.8 269 54.3
Lalb_Chr11g0075241 Lupinus albus HOM05D006521 ORTHO05D008087 9.7e-73 277.7 266 53.4
Sed0002886 Sechium edule HOM05D006521 ORTHO05D008087 9.7e-73 277.7 265 56.6
Ca_16545_v3 Cicer arietinum L. HOM05D006521 ORTHO05D008087 1.7e-72 276.9 261 54.4
arahy.Tifrunner.gnm1.ann1.2NAN3W Arachis hypogaea HOM05D006521 ORTHO05D008087 3.7e-72 275.8 285 51.9
arahy.Tifrunner.gnm1.ann1.IK9JFE Arachis hypogaea HOM05D006521 ORTHO05D008087 3.7e-72 275.8 288 51.7
Medtr3g087760 Medicago truncatula HOM05D006521 ORTHO05D008087 3.7e-72 275.8 259 54.4
Phvul.001G250400 Phaseolus vulgaris HOM05D006521 ORTHO05D008087 3.7e-72 275.8 276 53.3
Atru.chr4.229 Acer truncatum HOM05D006521 ORTHO05D008087 4.8e-72 275.4 262 55.0
MELO3C007776.2 Cucumis melo HOM05D006521 ORTHO05D008087 1.1e-71 274.2 267 54.7
Glyma.18G019200 Glycine max HOM05D006521 ORTHO05D008087 1.4e-71 273.9 275 53.1
VMungo1383G3636 Vigna mungo HOM05D006521 ORTHO05D008087 1.4e-71 273.9 276 52.2
Manes.12G138400 Manihot esculenta HOM05D006521 ORTHO05D008087 3.1e-71 272.7 277 53.4
CANSAT01G1058 Cannabis sativa HOM05D006521 ORTHO05D008087 4.1e-71 272.3 268 53.7
ClCG01G018970 Citrullus lanatus HOM05D006521 ORTHO05D008087 6.9e-71 271.6 267 54.3
Lj6g0010661 Lotus japonicus HOM05D006521 ORTHO05D008087 6.9e-71 271.6 279 50.5
Glyma.11G238100 Glycine max HOM05D006521 ORTHO05D008087 2.0e-70 270.0 276 52.2
CsaV3_6G045650 Cucumis sativus L. HOM05D006521 ORTHO05D008087 2.6e-70 269.6 284 52.1
Prupe.3G102100 Prunus persica HOM05D006521 ORTHO05D008087 2.6e-70 269.6 259 54.4
Thecc.01G106200 Theobroma cacao HOM05D006521 ORTHO05D008087 3.4e-70 269.2 269 51.7
Gorai.007G061700 Gossypium raimondii HOM05D006521 ORTHO05D008087 4.5e-70 268.9 279 50.5
RcHm_v2.0_Chr2g0115391 Rosa chinensis HOM05D006521 ORTHO05D008087 1.7e-69 266.9 280 51.1
CiPaw.03G138700 Carya illinoinensis HOM05D006521 ORTHO05D008087 3.8e-69 265.8 275 51.3
FAN28G0591 Fragaria x ananassa HOM05D006521 ORTHO05D008087 3.8e-69 265.8 258 53.1
Duzib264G0874 Durio zibethinus HOM05D006521 ORTHO05D008087 5.0e-69 265.4 271 52.4
Gorai.008G103700 Gossypium raimondii HOM05D006521 ORTHO05D008087 5.0e-69 265.4 269 52.0
QL06p050323 Quercus lobata HOM05D006521 ORTHO05D008087 5.0e-69 265.4 258 53.9
Haze_24978 Corylus avellana HOM05D006521 ORTHO05D008087 8.5e-69 264.6 264 51.9
FAN19G2752 Fragaria x ananassa HOM05D006521 ORTHO05D008087 8.5e-69 264.6 258 52.7
TAR376G0467 Trochodendron aralioides HOM05D006521 ORTHO05D008087 1.1e-68 264.2 283 50.2
FvH4_1g21530 Fragaria vesca HOM05D006521 ORTHO05D008087 1.9e-68 263.5 258 52.7
TWI74G1358 Tripterygium wilfordii HOM05D006521 ORTHO05D008087 1.9e-68 263.5 277 51.3
FAN23G2501 Fragaria x ananassa HOM05D006521 ORTHO05D008087 9.4e-68 261.2 258 52.3
Psat5g088760 Pisum sativum HOM05D006521 ORTHO05D008087 9.4e-68 261.2 259 52.9
Dinv16313 Davidia involucrata HOM05D006521 ORTHO05D008087 1.0e-66 257.7 266 52.3
Hma1.2p1_0011F.1_g007170 Hydrangea macrophylla HOM05D006521 ORTHO05D008087 3.0e-66 256.1 267 51.7
PGR004G2411 Punica granatum HOM05D006521 ORTHO05D008087 3.0e-66 256.1 259 52.5
Dinv00937 Davidia involucrata HOM05D006521 ORTHO05D008087 3.9e-66 255.8 266 51.9
Sed0013283 Sechium edule HOM05D006521 ORTHO05D008087 2.6e-65 253.1 265 50.9
PSO447G0171 Papaver somniferum HOM05D006521 ORTHO05D008087 3.3e-65 252.7 265 50.6
Potri.005G079300 Populus trichocarpa HOM05D006521 ORTHO05D008087 3.3e-65 252.7 260 50.8
TPR.G22881 Trifolium pratense HOM05D006521 ORTHO05D008087 3.3e-65 252.7 283 48.4
Ciclev10025891m.g Citrus clementina HOM05D006521 ORTHO05D008087 2.2e-64 250.0 269 50.2
Actinidia36602 Actinidia chinensis HOM05D006521 ORTHO05D008087 3.7e-64 249.2 277 50.2
TWI77G0511 Tripterygium wilfordii HOM05D006521 ORTHO05D008087 4.8e-64 248.8 279 49.5
Sabra05G0065200 Salix brachista HOM05D006521 ORTHO05D004292 1.4e-63 247.3 260 50.4
PSO210G2459 Papaver somniferum HOM05D006521 ORTHO05D008087 3.1e-63 246.1 265 49.4
Eucgr.I00394 Eucalyptus grandis HOM05D006521 ORTHO05D008087 2.0e-62 243.4 269 47.6
ECA234G2647 Erigeron canadensis HOM05D006521 ORTHO05D008087 2.6e-62 243.0 272 48.2
Rhsim10G0157900 Rhododendron simsii HOM05D006521 ORTHO05D008087 5.9e-62 241.9 287 47.0
Cfa002704 Carpinus fangiana HOM05D006521 ORTHO05D008087 1.7e-61 240.4 264 48.5
Lsat_1_v5_gn_4_21220 Lactuca sativa HOM05D006521 ORTHO05D008087 2.2e-61 240.0 270 48.5
HanXRQChr16g0527921 Helianthus annuus HOM05D006521 ORTHO05D008087 3.8e-61 239.2 264 49.2
Aqoxy5G01962 Aquilegia oxysepala HOM05D006521 ORTHO05D008087 1.9e-60 236.9 268 48.1
Cc07_g15580 Coffea canephora HOM05D006521 ORTHO05D008087 3.2e-60 236.1 265 50.2
SHI11594 Sapria himalayana HOM05D006521 ORTHO05D008087 5.5e-60 235.3 296 45.6
AUR62002034 Chenopodium quinoa HOM05D006521 ORTHO05D008087 7.2e-60 235.0 253 48.6
AUR62003763 Chenopodium quinoa HOM05D006521 ORTHO05D008087 7.2e-60 235.0 253 48.6
Sc16g0005450 Simmondsia chinensis HOM05D006521 ORTHO05D008087 1.2e-59 234.2 260 47.7
SGA_v2.0_scaffold2G01323 Striga asiatica HOM05D006521 ORTHO05D008087 2.3e-58 229.9 266 47.4
Lj4A883T21 Lonicera japonica HOM05D006521 ORTHO05D008087 8.8e-58 228.0 228 50.9
Nitab4.5_0000715g0180 Nicotiana tabacum HOM05D006521 ORTHO05D008087 8.8e-58 228.0 262 48.5
Ah.02g122760 Amaranthus hybridus HOM05D006521 ORTHO05D008087 1.2e-57 227.6 257 47.5
HanXRQChr15g0471711 Helianthus annuus HOM05D006521 ORTHO05D008087 1.2e-57 227.6 257 49.0
Lsat_1_v5_gn_2_67800 Lactuca sativa HOM05D006521 ORTHO05D008087 2.0e-57 226.9 256 48.0
Nn1g05268 Nelumbo nucifera HOM05D006521 ORTHO05D008087 2.6e-57 226.5 225 53.3
SalBow3G0008 Salvia bowleyana HOM05D006521 ORTHO05D008087 4.4e-57 225.7 284 45.8
Hund13498 Selenicereus undatus HOM05D006521 ORTHO05D008087 9.7e-57 224.6 252 46.0
Ah.02g120360 Amaranthus hybridus HOM05D006521 ORTHO05D008087 1.7e-56 223.8 257 47.1
Solyc05g051840.1 Solanum lycopersicum HOM05D006521 ORTHO05D008087 6.3e-56 221.9 259 46.7
Sopen05g030360 Solanum pennellii HOM05D006521 ORTHO05D008087 8.2e-56 221.5 259 46.7
PGSC0003DMG400021832 Solanum tuberosum HOM05D006521 ORTHO05D008087 1.4e-55 220.7 279 44.4
Migut.H02388 Erythranthe guttata HOM05D006521 ORTHO05D008087 3.5e-54 216.1 268 45.5
Oeu053565.1 Olea europaea HOM05D006521 ORTHO05D008087 4.5e-54 215.7 275 45.5
CAN.G1494.2 Capsicum annuum HOM05D006521 ORTHO05D008087 5.9e-54 215.3 282 45.7
unitig_32.g11814 Utricularia gibba HOM05D006521 ORTHO05D008087 7.7e-54 214.9 274 46.0
HPP92_016137 Vanilla planifolia HOM05D006521 ORTHO05D008087 3.8e-53 212.6 263 47.1
DCAR_011503 Daucus carota HOM05D006521 ORTHO05D008087 6.5e-53 211.8 268 46.3
Lj4A881T25 Lonicera japonica HOM05D006521 ORTHO05D008087 8.3e-48 194.9 199 54.3
CDE10G1235 Ceratophyllum demersum HOM05D006521 ORTHO05D008087 2.7e-46 189.9 271 42.8
ATR0789G153 Amborella trichopoda HOM05D006521 ORTHO05D008087 1.5e-41 174.1 390 31.8
COL.COLO4_09911 Corchorus olitorius HOM05D006521 ORTHO05D008087 1.5e-41 174.1 251 41.8
Nitab4.5_0005597g0010 Nicotiana tabacum HOM05D006521 ORTHO05D008087 9.8e-41 171.4 259 40.9
SMO353G0213 Selaginella moellendorffii HOM05D006521 ORTHO05D008087 5.9e-38 162.2 290 34.5
AagrBONN_evm.TU.Sc2ySwM_368.767 Anthoceros agrestis HOM05D006521 ORTHO05D008087 9.5e-36 154.8 313 31.9
Atru.chr1.3715 Acer truncatum HOM05D006521 ORTHO05D008087 8.0e-35 151.8 265 38.5
Pp3c19_5060 Physcomitrium patens HOM05D006521 ORTHO05D008087 1.0e-34 151.4 314 31.2
Pp3c22_3810 Physcomitrium patens HOM05D006521 ORTHO05D008087 2.2e-32 143.7 328 29.9
SEGI_26188 Sequoiadendron giganteum HOM05D006521 ORTHO05D008087 2.0e-30 137.1 140 50.7
Mapoly0165s0018 Marchantia polymorpha HOM05D006521 ORTHO05D008087 3.3e-28 129.8 357 28.9
Pp3c10_9400 Physcomitrium patens HOM05D006521 ORTHO05D008087 4.3e-28 129.4 291 28.2
Pp3c14_5890 Physcomitrium patens HOM05D006521 ORTHO05D008087 2.0e-25 120.6 291 26.5
Os02g0550400 Oryza sativa ssp. japonica HOM05D006521 ORTHO05D008087 1.1e-23 114.8 247 34.4
FAN13G3020 Fragaria x ananassa HOM05D005489 ORTHO05D006629 1.0e-21 108.2 130 44.6
EL10Ac6g15070 Beta vulgaris HOM05D006521 ORTHO05D008087 9.5e-20 101.7 109 47.7
CBR_g34484 Chara braunii HOM05D006521 ORTHO05D008087 2.8e-19 100.1 144 40.3
Peaxi162Scf00295g00033 Petunia axillaris HOM05D006521 ORTHO05D008087 2.0e-17 94.0 113 46.9
TAR636G0192 Trochodendron aralioides HOM05D006521 ORTHO05D008087 3.3e-12 76.6 107 40.2
GSVIVG01022164001 Vitis vinifera HOM05D006521 ORTHO05D008087 2.8e-11 73.6 67 53.7
ECA238G1388 Erigeron canadensis HOM05D001700 ORTHO05D002131 6.8e-10 68.9 68 52.9
ECA238G2228 Erigeron canadensis HOM05D006521 ORTHO05D008087 3.4e-09 66.6 66 53.0
CDE10G1372 Ceratophyllum demersum HOM05D006521 ORTHO05D008087 1.3e-08 64.7 67 52.2
Atru.chr1.3698 Acer truncatum HOM05D006521 ORTHO05D008087 2.2e-08 63.9 52 57.7
Atru.chr1.3697 Acer truncatum HOM05D006521 ORTHO05D008087 1.6e-06 57.8 56 51.8
BcaNung00904 Brassica carinata HOM05D006521 ORTHO05D008087 4.6e-06 56.2 33 78.8


User provided reference genes

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