Anchorpoints

Gene id
VV13G02740
Organism
Vitis vinifera

Paralogs (intra-species colinear regions)

No paralogous anchorpoints available


Orthologs (inter-species colinear regions)

Arabidopsis thaliana

Gene id Description Chromosome Strand Multiplicon
AT3G10390Flavin containing amine oxidoreductase family protein FLOWERING LOCUS D (FLD); FUNCTIONS IN: primary amine oxidase activity; INVOLVED IN: vegetative to reproductive phase transition of meristem, positive regulation of flower development, histone deacetylation; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 11 growth stages; CONTAINS InterPro DOMAIN/s: Amine oxidase (InterPro:IPR002937), SWIRM (InterPro:IPR007526); BEST Arabidopsis thaliana protein match is: LSD1-like 1 (TAIR:AT1G62830.1); Has 6633 Blast hits to 6189 proteins in 1142 species: Archae - 35; Bacteria - 2778; Metazoa - 1469; Fungi - 560; Plants - 667; Viruses - 0; Other Eukaryotes - 1124 (source: NCBI BLink). Encodes a plant homolog of a SWIRM domain containing protein found in histone deacetylase complexes in mammals. Lesions in FLD result in hyperacetylation of histones in FLC chromatin, up-regulation of FLC expression and extremely delayed flowering. FLD plays a key role in regulating the reproductive competence of the shoot and results in different developmental phase transitions in Arabidopsis.3+View

Populus trichocarpa

Gene id Description Chromosome Strand Multiplicon
PT10G22720No description available.Chr10+View
PT08G03520No description available.Chr08-View

Solanum lycopersicum

Gene id Description Chromosome Strand Multiplicon
SL11G008320Lysine-specific histone demethylase 1 (AHRD V1 *--- B2WC79_PYRTR)%3B contains Interpro domain(s) IPR002937 Amine oxidasech11-View
SL05G055580Lysine-specific histone demethylase 1 (AHRD V1 *--- B2WC79_PYRTR)%3B contains Interpro domain(s) IPR002937 Amine oxidasech05+View


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Gene id
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Description
Chromosome
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