Gene: AT3G10390 (Arabidopsis thaliana)

Overview top

Gene Identifier
AT3G10390
Transcript Identifier
AT3G10390.1
Gene Type
Coding gene
Location
3 : 3229293-3232345 : positive

Family

Gene family
HOM03M000331
(175 genes in 16 species)
specific family
Subfamily
ORTHO03M000686
(12 genes in 8 species)
specific family
Duplication type
Block duplicate

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Descriptions

Description
Flavin containing amine oxidoreductase family protein
Curated Summary
Encodes a plant homolog of a SWIRM domain containing protein found in histone deacetylase complexes in mammals. Lesions in FLD result in hyperacetylation of histones in FLC chromatin, up-regulation of FLC expression and extremely delayed flowering. FLD plays a key role in regulating the reproductive competence of the shoot and results in different developmental phase transitions in Arabidopsis.
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Identifiers

Identifier Name
aliasFLOWERING LOCUS D
aliasFLD
uniprotQ9CAE3

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Biological Process

GO termEvidence(s)ProviderDescriptionSource
GO:0009911IMPGene Ontologypositive regulation of flower development1
GO:0016575IMPGene Ontologyhistone deacetylation1
GO:0010228IMPGene Ontologyvegetative to reproductive phase transition of meristem1
GO:0009851RCAGene Ontologyauxin biosynthetic process1
GO:0010229RCAGene Ontologyinflorescence development1
GO:0048825RCAGene Ontologycotyledon development1
GO:0016568IEAUniProtchromatin modification1 2 3 4 5 6
GO:0006355IEAUniProtregulation of transcription, DNA-dependent1 2 3 4 5 6
GO:0006351IEAUniProttranscription, DNA-templated1 2 3 4 5 6
GO:0055114IEAInterProoxidation-reduction process

Molecular Function

GO termEvidence(s)ProviderDescriptionSource
GO:0008131ISSGene Ontologyprimary amine oxidase activity1
GO:0003677IEAUniProtDNA binding1 2 3 4 5 6
GO:0016491IEAUniProtoxidoreductase activity1 2 3 4 5 6
GO:0005515IEAInterProprotein binding

Cellular Component

GO termEvidence(s)ProviderDescriptionSource
GO:0005739ISMGene Ontologymitochondrion1

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Experimental Evidence
Electronic Evidence
Computational Reviewed Evidence
GO Sources:   Primary     Orthology     Homology  
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InterPro Description
IPR011991Winged helix-turn-helix DNA-binding domain
IPR007526SWIRM domain
IPR002937Amine oxidase
IPR009057Homeodomain-like

Mapman id Description
26.7misc.oxidases - copper, flavone etc
No SignalP domains detected for this gene.
DatabaseType
PlnTFDBSWI/SNF-SWI3