Anchorpoints

Gene id
CP00002G03640
Organism
Carica papaya

Paralogs (intra-species colinear regions)

No paralogous anchorpoints available


Orthologs (inter-species colinear regions)

Arabidopsis thaliana

Gene id Description Chromosome Strand Multiplicon
AT2G30110Encodes a ubiquitin-activating enzyme (E1), involved in the first step in conjugating multiple ubiquitins to proteins targeted for degradation. Gene is expressed in most tissues examined. Mutant is able to revert the constitutive defense responses phenotype of snc1, which indicates the gene is involved in defense response. It also indicates that ubiquitination plays a role in plant defense signalling. ubiquitin-activating enzyme 1 (UBA1); FUNCTIONS IN: ubiquitin-protein ligase activity, ubiquitin activating enzyme activity; INVOLVED IN: response to cadmium ion, response to other organism, protein ubiquitination, ubiquitin-dependent protein catabolic process; LOCATED IN: plasma membrane; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Ubiquitin-activating enzyme, E1, active site (InterPro:IPR018074), Ubiquitin-activating enzyme, E1 (InterPro:IPR018075), Ubiquitin-activating enzyme e1, C-terminal (InterPro:IPR018965), Ubiquitin-activating enzyme repeat (InterPro:IPR000127), Ubiquitin-activating enzyme (InterPro:IPR019572), UBA/THIF-type NAD/FAD binding fold (InterPro:IPR000594), Molybdenum cofactor biosynthesis, MoeB (InterPro:IPR009036), NAD(P)-binding domain (InterPro:IPR016040), Ubiquitin-activating enzyme, E1-like (InterPro:IPR000011); BEST Arabidopsis thaliana protein match is: ubiquitin activating enzyme 2 (TAIR:AT5G06460.1); Has 19490 Blast hits to 12603 proteins in 2346 species: Archae - 393; Bacteria - 11015; Metazoa - 2131; Fungi - 1366; Plants - 791; Viruses - 0; Other Eukaryotes - 3794 (source: NCBI BLink). ubiquitin-activating enzyme 12-View

Brachypodium distachyon

Gene id Description Chromosome Strand Multiplicon
BD1G65320No description available.Bd1+View

Oryza sativa ssp. japonica

Gene id Description Chromosome Strand Multiplicon
OS03G18380ubiquitin-activating enzyme, putative, expressed3-View

Oryza sativa ssp. indica

Gene id Description Chromosome Strand Multiplicon
OSINDICA_03G17130No description available.Chr03-View

Populus trichocarpa

Gene id Description Chromosome Strand Multiplicon
PT01G28060No description available.Chr01-View
PT09G07570No description available.Chr09-View

Sorghum bicolor

Gene id Description Chromosome Strand Multiplicon
SB08G000540No description available.chr_8-View
SB01G038300No description available.chr_1+View

Setaria italica

Gene id Description Chromosome Strand Multiplicon
SI009G45220No description available.scaffold_9+View

Solanum lycopersicum

Gene id Description Chromosome Strand Multiplicon
SL06G007320Ubiquitin-activating enzyme E1 (AHRD V1 ***- B9SKU8_RICCO)%3B contains Interpro domain(s) IPR018075 Ubiquitin-activating enzyme%2C E1ch06-View

Vitis vinifera

Gene id Description Chromosome Strand Multiplicon
VV06G01330name=GSVIVG01024680001;chr6-View

Zea mays

Gene id Description Chromosome Strand Multiplicon
ZM01G12480No description available.1-View


Download

Gene id
Species
Description
Chromosome
Strand