PLAZA 3.0 Monocots gene overview : CP00002G03640

Gene: CP00002G03640 (Carica papaya)

Overview

Gene Identifier: CP00002G03640
Transcript Identifier: CP00002G03640.1
Gene Type: Coding gene
Location: supercontig_2 : 4307079-4312638 : positive

Family

Gene family: HOM03M001356
(55 genes in 16 species)
specific family

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Descriptions

Description (AnnoMine): Ubiquitin-activating enzyme E1 1

Only text-mined description found ...
Description of best ortholog(s):

Identifiers

Identifier	Name
pid	evm.TU.supercontig_2.364

Toolbox

Explore

...the colinearity of this gene with other genomes.
...the local gene organization for homologous genes.
...the phylogenetic tree of the homologous gene family.
...the orthologs using the Integrative Orthology Viewer.
...the conserved binding sites (upstream/downstream,intron)

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Biological Process

GO term	Evidence(s)	Provider	Description	Source
GO:0008152	IEA	Genome Project	metabolic process
GO:0006464	IEA	Genome Project	cellular protein modification process
GO:0016567	ISO	PLAZA Integrative Orthology	protein ubiquitination	AT5G06460 AT2G30110
GO:0006511	ISO	PLAZA Integrative Orthology	ubiquitin-dependent protein catabolic process	AT5G06460 AT2G30110
GO:0051707	ISO	PLAZA Integrative Orthology	response to other organism	AT2G30110
GO:0046686	ISO	PLAZA Integrative Orthology	response to cadmium ion	AT2G30110
GO:0036211	IEA	PLAZA Homology	protein modification process	HOM03M001356

Molecular Function

GO term	Evidence(s)	Provider	Description	Source
GO:0008641	IEA	Genome Project	small protein activating enzyme activity
GO:0005524	IEA	Genome Project	ATP binding
GO:0003824	IEA	Genome Project	catalytic activity
GO:0005488	IEA	Genome Project	binding
GO:0004842	ISO	PLAZA Integrative Orthology	ubiquitin-protein ligase activity	AT5G06460 AT2G30110
GO:0004839	ISO	PLAZA Integrative Orthology	ubiquitin activating enzyme activity	AT5G06460 AT2G30110

Cellular Component

GO term	Evidence(s)	Provider	Description	Source
GO:0005634	ISO	PLAZA Integrative Orthology	nucleus	AT5G06460
GO:0005829	ISO	PLAZA Integrative Orthology	cytosol	AT5G06460 AT2G30110
GO:0009506	ISO	PLAZA Integrative Orthology	plasmodesma	AT2G30110
GO:0005886	ISO	PLAZA Integrative Orthology	plasma membrane	AT2G30110

Color Legend

Experimental Evidence

Electronic Evidence

Computational Reviewed Evidence

InterPro	Description
IPR000011	Ubiquitin/SUMO-activating enzyme E1
IPR000127	Ubiquitin-activating enzyme repeat
IPR018075	Ubiquitin-activating enzyme, E1
IPR018965	Ubiquitin-activating enzyme e1, C-terminal
IPR009036	Molybdenum cofactor biosynthesis, MoeB
IPR016040	NAD(P)-binding domain
IPR023280	Ubiquitin-like 1 activating enzyme, catalytic cysteine domain
IPR000594	UBA/THIF-type NAD/FAD binding fold
IPR018074	Ubiquitin-activating enzyme, E1, active site
IPR019572	Ubiquitin-activating enzyme

No MapMan annotations defined for this gene.

No SignalP domains detected for this gene.