Anchorpoints

Gene id
AT1G69670
Organism
Arabidopsis thaliana

Paralogs (intra-species colinear regions)

Gene id Description Chromosome Strand Multiplicon
AT1G26830Cullin, putative, similar to Cullin homolog 3 (CUL-3) SP:Q13618, GI:3639052 from (Homo sapiens); contains Pfam profile PF00888: Cullin family. Interacts with other components of E3 ligase complex suggesting it functions in RUB-modification. Forms complexes with BTB domain proteins forming a novel class of E3-based ubiquitin protein-ligase complexes. Mutant is early flowering and has a reduced sensitivity to far-red light. cul3a/cul3b homozygous/heterozygous plants are embryo lethal. cullin 3 cullin 3 (CUL3); CONTAINS InterPro DOMAIN/s: Winged helix-turn-helix transcription repressor DNA-binding (InterPro:IPR011991), Cullin homology (InterPro:IPR016158), Cullin protein, neddylation domain (InterPro:IPR019559), Cullin, N-terminal (InterPro:IPR001373), Cullin repeat-like-containing domain (InterPro:IPR016159); BEST Arabidopsis thaliana protein match is: cullin 3B (TAIR:AT1G69670.1); Has 2310 Blast hits to 2269 proteins in 235 species: Archae - 0; Bacteria - 9; Metazoa - 1034; Fungi - 455; Plants - 372; Viruses - 0; Other Eukaryotes - 440 (source: NCBI BLink).1+View


Orthologs (inter-species colinear regions)

Brachypodium distachyon

Gene id Description Chromosome Strand Multiplicon
BD3G59330No description available.Bd3+View

Carica papaya

Gene id Description Chromosome Strand Multiplicon
CP00128G00090No description available.supercontig_128+View

Musa acuminata

Gene id Description Chromosome Strand Multiplicon
MA07G18430CC_gene:cul3b,CC_gene:cul3a,CC_gene:CUL3,CC_gene:Cul3,CC_gene:culC,CC_gene:CUL3A,CC_gene:CUL3B,CC_functional_completeness:complete,PRODUCT:Cullin-3B,GO:0031625,GO:0031461,GO:0006511,CC_evidence_code:ISS,CC_status:in_progress,CC_evidence:automatic,CC_EC_number:no_EC_numberchr7+View

Oryza sativa ssp. japonica

Gene id Description Chromosome Strand Multiplicon
OS02G51180cullin, putative, expressed2-View

Sorghum bicolor

Gene id Description Chromosome Strand Multiplicon
SB04G027970No description available.chr_4+View

Setaria italica

Gene id Description Chromosome Strand Multiplicon
SI001G33230No description available.scaffold_1-View

Solanum lycopersicum

Gene id Description Chromosome Strand Multiplicon
SL01G010820Cullin C (AHRD V1 ***- D3BHJ6_POLPA)%3B contains Interpro domain(s) IPR001373 Cullin%2C N-terminalch01+View
SL02G087900Cullin C (AHRD V1 ***- D3BHJ6_POLPA)%3B contains Interpro domain(s) IPR001373 Cullin%2C N-terminalch02+View

Vitis vinifera

Gene id Description Chromosome Strand Multiplicon
VV14G01960name=GSVIVG01011387001;chr14+View
VV01G12250name=GSVIVG01020008001;chr1+View

Zea mays

Gene id Description Chromosome Strand Multiplicon
ZM05G40320No description available.5-View


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Gene id
Species
Description
Chromosome
Strand