Gene: BD3G59330 (Brachypodium distachyon)

Overview top

Gene Identifier
BD3G59330
Transcript Identifier
BD3G59330.1
Gene Type
Coding gene
Location
Bd3 : 58554542-58557283 : positive

Family

Gene family
HOM03M000391
(156 genes in 16 species)
specific family
Duplication type
Block duplicate

Loading...please wait

Descriptions

Description (AnnoMine)
Cullin-3
Only text-mined description found ...
Description of best ortholog(s):

Identifiers

Identifier Name
GeneNameBradi3g59330
RNAnameBradi3g59330.1

Toolbox

Explore

View

 

Biological Process

GO termEvidence(s)ProviderDescriptionSource
GO:0006511IEAInterProubiquitin-dependent protein catabolic process
GO:0009960ISOPLAZA Integrative Orthologyendosperm developmentAT1G69670 AT1G26830
GO:0009793ISOPLAZA Integrative Orthologyembryo development ending in seed dormancyAT1G69670 AT1G26830
GO:0009911ISOPLAZA Integrative Orthologypositive regulation of flower developmentAT1G26830
GO:0009639ISOPLAZA Integrative Orthologyresponse to red or far red lightAT1G26830
GO:0044265IEAPLAZA Homologycellular macromolecule catabolic processHOM03M000391
GO:0030163IEAPLAZA Homologyprotein catabolic processHOM03M000391
GO:0051603IEAPLAZA Homologyproteolysis involved in cellular protein catabolic processHOM03M000391
GO:0019941IEAPLAZA Homologymodification-dependent protein catabolic processHOM03M000391
GO:0044257IEAPLAZA Homologycellular protein catabolic processHOM03M000391
GO:0043632IEAPLAZA Homologymodification-dependent macromolecule catabolic processHOM03M000391

Molecular Function

GO termEvidence(s)ProviderDescriptionSource
GO:0031625IEAInterProubiquitin protein ligase binding
GO:0005515ISOPLAZA Integrative Orthologyprotein bindingAT1G69670 AT1G26830
GO:0044389IEAPLAZA Homologysmall conjugating protein ligase bindingHOM03M000391
GO:0019899IEAPLAZA Homologyenzyme bindingHOM03M000391

Cellular Component

GO termEvidence(s)ProviderDescriptionSource
GO:0031461IEAInterProcullin-RING ubiquitin ligase complex
GO:0019005ISOPLAZA Integrative OrthologySCF ubiquitin ligase complexAT1G69670 AT1G26830
GO:0000151ISOPLAZA Integrative Orthologyubiquitin ligase complexAT1G69670 AT1G26830
GO:0005829ISOPLAZA Integrative OrthologycytosolAT1G26830

Color Legend

Experimental Evidence
Electronic Evidence
Computational Reviewed Evidence
GO Sources:   Primary     Orthology     Homology  
Show redundant parents:  
 
InterPro Description
IPR016158Cullin homology
IPR001373Cullin, N-terminal
IPR019559Cullin protein, neddylation domain
IPR011991Winged helix-turn-helix DNA-binding domain
IPR016159Cullin repeat-like-containing domain

Mapman id Description
29.5.11.4.3.3protein.degradation.ubiquitin.E3.SCF.cullin
No SignalP domains detected for this gene.