Functional clusters
Information
- Type
- InterPro domain
- Identifier
- IPR000772
- Description
- Ricin B lectin domain
Cluster overview
Species | Chromosome | Experiment | Cluster id | Cluster size | Number of genes | E-value |
---|---|---|---|---|---|---|
Brachypodium distachyon | Bd1 | 13 | CH_bdi_191 | 3 | 3 | 0.00000139409 |
Carica papaya | supercontig_33 | 13 | CH_cpa_80 | 4 | 19 | 0.0000000531366 |
Oryza sativa ssp. indica | Chr07 | 13 | CH_osaindica_633 | 3 | 10 | 0.0000513695 |
Oryza sativa ssp. japonica | 3 | 13 | CH_osa_599 | 3 | 12 | 0.0000923203 |
Oryza sativa ssp. japonica | 4 | 13 | CH_osa_348 | 3 | 3 | 0.00000042016 |
Oryza sativa ssp. japonica | 7 | 13 | CH_osa_433 | 3 | 5 | 0.00000420044 |
Populus trichocarpa | Chr06 | 13 | CH_ptr_162 | 6 | 26 | 0.0000000000126515 |
Setaria italica | scaffold_2 | 13 | CH_sit_333 | 3 | 3 | 0.0000010488 |
Vitis vinifera | chr19 | 13 | CH_vvi_367 | 3 | 5 | 0.00000475005 |
Vitis vinifera | chr2 | 13 | CH_vvi_346 | 3 | 4 | 0.00000190036 |
Zea mays | 7 | 13 | CH_zma_179 | 3 | 3 | 0.000000834675 |
Functional clusters experiments
Exp id | Data type | Data filter | Min genes cluster | Max genes cluster | Max cluster size | E-value | Tandems removal |
---|---|---|---|---|---|---|---|
1 | GO | Primary GO data only. | 2 | 30 | 80 | 0.001 | X |
2 | GO | Primary and orthology projected GO data. | 2 | 30 | 80 | 0.001 | X |
3 | GO | All GO data. | 2 | 30 | 80 | 0.001 | X |
4 | GO | Primary GO data only. | 10 | 150 | 300 | 0.001 | X |
5 | GO | Primary and orthology projected GO data. | 10 | 150 | 300 | 0.001 | X |
6 | GO | All GO data. | 10 | 150 | 300 | 0.001 | X |
7 | GO | Primary GO data only. | 2 | 30 | 80 | 0.001 | V |
8 | GO | Primary and orthology projected GO data. | 2 | 30 | 80 | 0.001 | V |
9 | GO | All GO data. | 2 | 30 | 80 | 0.001 | V |
10 | GO | Primary GO data only. | 10 | 150 | 300 | 0.001 | V |
11 | GO | Primary and orthology projected GO data. | 10 | 150 | 300 | 0.001 | V |
12 | GO | All GO data. | 10 | 150 | 300 | 0.001 | V |
13 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 | X |
14 | InterPro | No filter applied. | 10 | 150 | 300 | 0.001 | X |
15 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 | V |
16 | InterPro | No filter applied. | 10 | 150 | 300 | 0.001 | V |
17 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | X |
18 | MapMan | No filter applied. | 10 | 150 | 300 | 0.001 | X |
19 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | V |
20 | MapMan | No filter applied. | 10 | 150 | 300 | 0.001 | V |