Anchorpoints

Gene id
VV06G12450
Organism
Vitis vinifera

Paralogs (intra-species colinear regions)

No paralogous anchorpoints available


Orthologs (inter-species colinear regions)

Arabidopsis lyrata

Gene id Description Chromosome Strand Multiplicon
AL6G21610No description available.scaffold_6+View

Arabidopsis thaliana

Gene id Description Chromosome Strand Multiplicon
AT5G22000RING-H2 group F2A RING-H2 group F2A (RHF2A); FUNCTIONS IN: zinc ion binding; INVOLVED IN: regulation of cell cycle, proteolysis involved in cellular protein catabolic process, megagametogenesis, microgametogenesis; LOCATED IN: plasma membrane; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, RING-type (InterPro:IPR001841), Zinc finger, C3HC4 RING-type (InterPro:IPR018957); BEST Arabidopsis thaliana protein match is: RING-H2 group F1A (TAIR:AT4G14220.1); Has 8047 Blast hits to 5903 proteins in 316 species: Archae - 0; Bacteria - 141; Metazoa - 1863; Fungi - 401; Plants - 2610; Viruses - 42; Other Eukaryotes - 2990 (source: NCBI BLink). encodes a RING-type E3 ubiquitin ligase implicated in gametogenesis. Double mutant analyses with RHF1a suggests that RHF2a may be involved in targetting ICK4KRP6 for degradation following meiosis in order to allow the mitoses associated with megagametogenesis and microgametogenesis to occur. RHF2a is expressed in all four floral whorls and is present at ~8-fold higher levels than RHF1a in inflorescences by RT-PCR analyses.5+View

Brassica rapa

Gene id Description Chromosome Strand Multiplicon
BR03G09390No description available.A03+View
BR02G10800No description available.A02+View

Beta vulgaris

Gene id Description Chromosome Strand Multiplicon
BV7G04250No description available.Bvchr7.sca021-View

Carica papaya

Gene id Description Chromosome Strand Multiplicon
CP00103G00460No description available.supercontig_103+View

Capsella rubella

Gene id Description Chromosome Strand Multiplicon
CRU_006G19120No description available.scaffold_6+View

Eucalyptus grandis

Gene id Description Chromosome Strand Multiplicon
EG0010G05180No description available.scaffold_10-View

Fragaria vesca

Gene id Description Chromosome Strand Multiplicon
FV3G40710E3 ubiquitin-protein ligase At3g02290 (probable)LG3+View

Gossypium raimondii

Gene id Description Chromosome Strand Multiplicon
GR09G08160No description available.Chr09-View

Medicago truncatula

Gene id Description Chromosome Strand Multiplicon
MT7G106770E3 ubiquitin-protein ligase RHF2A-like proteinchr7-View

Solanum lycopersicum

Gene id Description Chromosome Strand Multiplicon
SL06G073860RING-H2 zinc finger protein (Fragment) (AHRD V1 *-*- A1IW10_9LAMI)ch06+View

Solanum tuberosum

Gene id Description Chromosome Strand Multiplicon
ST06G030260Zinc finger RING-type (AHRD V1 **-- Q2HT04_MEDTR)chr06-View

Theobroma cacao

Gene id Description Chromosome Strand Multiplicon
TC0009G26370No description available.scaffold_9-View

Thellungiella parvula

Gene id Description Chromosome Strand Multiplicon
TP6G23190similar to AT5G22000|RHF2A (RING-H2 GROUP F2A)ch6-6-View


Download

Gene id
Species
Description
Chromosome
Strand