Anchorpoints
- Gene id
- TP1G36490
- Organism
- Thellungiella parvula
Paralogs (intra-species colinear regions)
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
TP3G17220 | similar to AT3G19150|KRP6 (KIP-RELATED PROTEIN 6) | ch3-1 | - | View |
Orthologs (inter-species colinear regions)
Arabidopsis lyrata
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
AL3G20680 | No description available. | scaffold_3 | - | View |
AL1G43900 | No description available. | scaffold_1 | - | View |
Arabidopsis thaliana
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
AT1G49620 | ICK5; FUNCTIONS IN: cyclin binding, cyclin-dependent protein kinase inhibitor activity; INVOLVED IN: negative regulation of cyclin-dependent protein kinase activity; LOCATED IN: nucleus; EXPRESSED IN: 18 plant structures; EXPRESSED DURING: 6 growth stages; CONTAINS InterPro DOMAIN/s: Cyclin-dependent kinase inhibitor (InterPro:IPR003175), Cyclin-dependent kinase inhibitor, plant (InterPro:IPR016701); BEST Arabidopsis thaliana protein match is: KIP-related protein 6 (TAIR:AT3G19150.1); Has 254 Blast hits to 244 proteins in 41 species: Archae - 0; Bacteria - 7; Metazoa - 4; Fungi - 18; Plants - 204; Viruses - 0; Other Eukaryotes - 21 (source: NCBI BLink). Cyclin-dependent kinase inhibitor family protein Kip-related protein (KRP) gene, encodes CDK (cyclin-dependent kinase) inhibitor (CKI), negative regulator of cell division. A member of seven KRP genes found in Arabidopsis thaliana. Differential expression patterns for distinct KRPs were revealed by in situ hybridization. Binds to D type cyclins and may inhibit cell cycle. | 1 | - | View |
AT3G19150 | KIP-related protein 6 KIP-related protein 6 (KRP6); FUNCTIONS IN: cyclin binding, cyclin-dependent protein kinase inhibitor activity; INVOLVED IN: negative regulation of cyclin-dependent protein kinase activity, DNA endoreduplication; LOCATED IN: nucleus; EXPRESSED IN: 8 plant structures; EXPRESSED DURING: D pollen mother cell meiosis stage, C tetrad of megaspores, B meiosis of megaspore mother cell; CONTAINS InterPro DOMAIN/s: Cyclin-dependent kinase inhibitor, plant (InterPro:IPR016701), Cyclin-dependent kinase inhibitor (InterPro:IPR003175); BEST Arabidopsis thaliana protein match is: Cyclin-dependent kinase inhibitor family protein (TAIR:AT1G49620.1); Has 1712 Blast hits to 484 proteins in 111 species: Archae - 0; Bacteria - 136; Metazoa - 266; Fungi - 200; Plants - 207; Viruses - 3; Other Eukaryotes - 900 (source: NCBI BLink). Kip-related protein (KRP) gene, encodes CDK (cyclin-dependent kinase) inhibitor (CKI), negative regulator of cell division. Binds to D type cyclins. A member of seven KRP genes found in Arabidopsis thaliana. Differential expression patterns for distinct KRPs were revealed by in situ hybridization. KRP6 appears to be targeted for degradation by RHF1a and RHF2a to allow mitotic divisions during gametogenesis. In addition, KRP6 transcript levels rise prior to and drop following the meitotic divisions of gametogenesis. Elevated levels of KRP6 negatively affect plant development and fertility. | 3 | - | View |
Brassica rapa
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
BR03G35810 | No description available. | A03 | - | View |
BR06G03370 | No description available. | A06 | - | View |
Cucumis melo
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
CM00034G00450 | No description available. | CM3.5_scaffold00034 | + | View |
Carica papaya
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
CP00062G00280 | No description available. | supercontig_62 | - | View |
Capsella rubella
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
CRU_003G18100 | No description available. | scaffold_3 | - | View |
CRU_001G36910 | No description available. | scaffold_1 | - | View |
Fragaria vesca
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
FV3G33420 | Cyclin-dependent kinase inhibitor 7 (probable) | LG3 | - | View |
FV1G18530 | Cyclin-dependent kinase inhibitor 6 (probable) | LG1 | - | View |
Glycine max
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
GM07G33360 | No description available. | Gm07 | + | View |
Gossypium raimondii
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
GR02G00740 | No description available. | Chr02 | + | View |
GR13G04260 | No description available. | Chr13 | + | View |
Lotus japonicus
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
LJ4G012370 | No description available. | chr4 | + | View |
Malus domestica
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
MD15G021790 | No description available. | 15 | + | View |
MD02G015110 | No description available. | 2 | + | View |
Medicago truncatula
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
MT4G086450 | cyclin-dependent kinase inhibitor family protein | chr4 | - | View |
Populus trichocarpa
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
PT04G14210 | No description available. | Chr04 | - | View |
PT05G13750 | No description available. | Chr05 | + | View |
PT09G10360 | No description available. | Chr09 | - | View |
Ricinus communis
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
RC29801G01480 | No description available. | 29801 | - | View |
Solanum lycopersicum
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
SL01G108610 | Cyclin-dependent kinase inhibitor 12 (AHRD V1 ***- Q6T2Z2_SOYBN)%3B contains Interpro domain(s) IPR016701 Cyclin-dependent kinase inhibitor%2C plant | ch01 | + | View |
Solanum tuberosum
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
ST01G045850 | Cyclin-dependent kinase inhibitor 12 (AHRD V1 ***- Q6T2Z2_SOYBN); contains Interpro domain(s) IPR016701 Cyclin-dependent kinase inhibitor, plant | chr01 | + | View |
Theobroma cacao
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
TC0002G09450 | No description available. | scaffold_2 | + | View |
Vitis vinifera
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
VV03G06910 | name=GSVIVG01031765001; | chr3 | - | View |