Anchorpoints

Gene id
TC0009G35090
Organism
Theobroma cacao

Paralogs (intra-species colinear regions)

No paralogous anchorpoints available


Orthologs (inter-species colinear regions)

Arabidopsis lyrata

Gene id Description Chromosome Strand Multiplicon
AL8G24350No description available.scaffold_8-View
AL6G06830No description available.scaffold_6-View

Arabidopsis thaliana

Gene id Description Chromosome Strand Multiplicon
AT5G07120sorting nexin 2B sorting nexin 2B (SNX2b); FUNCTIONS IN: phospholipid binding; INVOLVED IN: vesicle-mediated transport, intracellular signaling pathway; LOCATED IN: membrane; EXPRESSED IN: cultured cell; CONTAINS InterPro DOMAIN/s: Vps5 C-terminal (InterPro:IPR015404), Phox-like (InterPro:IPR001683); BEST Arabidopsis thaliana protein match is: sorting nexin 2A (TAIR:AT5G58440.1); Has 2399 Blast hits to 2386 proteins in 279 species: Archae - 13; Bacteria - 100; Metazoa - 1366; Fungi - 555; Plants - 146; Viruses - 0; Other Eukaryotes - 219 (source: NCBI BLink). Encodes sorting nexin SNX2b. SNX2b is peripherally associated with membranes. Involved in vesicular trafficking from endosomes to the vacuole.5-View
AT5G58440sorting nexin 2A (SNX2a); FUNCTIONS IN: phosphoinositide binding; INVOLVED IN: signal transduction, intracellular signaling pathway; LOCATED IN: cellular_component unknown; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Vps5 C-terminal (InterPro:IPR015404), Phox-like (InterPro:IPR001683); BEST Arabidopsis thaliana protein match is: sorting nexin 2B (TAIR:AT5G07120.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). sorting nexin 2A5-View

Amborella trichopoda

Gene id Description Chromosome Strand Multiplicon
ATR_00023G00270No description available.scaffold00023-View

Brassica rapa

Gene id Description Chromosome Strand Multiplicon
BR10G11320No description available.A10-View

Beta vulgaris

Gene id Description Chromosome Strand Multiplicon
BV0G59730No description available.Bvchr2_un.sca001-View
BV7G07510No description available.Bvchr7.sca021-View

Citrullus lanatus

Gene id Description Chromosome Strand Multiplicon
CL07G04600No description available.Chr7+View
CL03G00460No description available.Chr3+View

Cucumis melo

Gene id Description Chromosome Strand Multiplicon
CM00044G00470No description available.CM3.5_scaffold00044+View
CM00041G00650No description available.CM3.5_scaffold00041+View

Carica papaya

Gene id Description Chromosome Strand Multiplicon
CP00002G03290No description available.supercontig_2-View

Capsella rubella

Gene id Description Chromosome Strand Multiplicon
CRU_008G18560No description available.scaffold_8-View
CRU_006G05940No description available.scaffold_6-View

Citrus sinensis

Gene id Description Chromosome Strand Multiplicon
CS00026G01770No description available.scaffold00026+View

Eucalyptus grandis

Gene id Description Chromosome Strand Multiplicon
EG0002G33790No description available.scaffold_2+View

Fragaria vesca

Gene id Description Chromosome Strand Multiplicon
FV3G32130Sorting nexin-2 (probable)LG3-View
FV7G30420Sorting nexin-2 (probable)LG7+View

Glycine max

Gene id Description Chromosome Strand Multiplicon
GM14G06061No description available.Gm14-View
GM02G39760No description available.Gm02+View
GM14G37820No description available.Gm14+View
GM02G42930No description available.Gm02-View

Gossypium raimondii

Gene id Description Chromosome Strand Multiplicon
GR03G15030No description available.Chr03+View

Lotus japonicus

Gene id Description Chromosome Strand Multiplicon
LJ2G042770No description available.chr2+View

Malus domestica

Gene id Description Chromosome Strand Multiplicon
MD03G004300No description available.3+View

Medicago truncatula

Gene id Description Chromosome Strand Multiplicon
MT5G073280sorting nexin 2Bchr5-View

Oryza sativa ssp. japonica

Gene id Description Chromosome Strand Multiplicon
OS05G27920phox domain-containing protein, putative, expressed5+View
OS05G39680PX domain containing protein, expressed5+View
OS01G61150phox domain-containing protein, putative, expressed1-View

Prunus persica

Gene id Description Chromosome Strand Multiplicon
PPE_006G02580No description available.scaffold_6+View
PPE_002G24720No description available.scaffold_2+View

Populus trichocarpa

Gene id Description Chromosome Strand Multiplicon
PT19G12160No description available.Chr19-View

Solanum lycopersicum

Gene id Description Chromosome Strand Multiplicon
SL06G050550Sorting nexin 1 (AHRD V1 ***- Q70YZ8_BRAOL)%3B contains Interpro domain(s) IPR001683 Phox-likech06+View

Solanum tuberosum

Gene id Description Chromosome Strand Multiplicon
ST06G011150Sorting nexin 1 (AHRD V1 ***- Q70YZ8_BRAOL); contains Interpro domain(s) IPR001683 Phox-likechr06-View

Thellungiella parvula

Gene id Description Chromosome Strand Multiplicon
TP6G20130similar to AT5G58440|SNX2a (SORTING NEXIN 2a)ch6-6-View

Vitis vinifera

Gene id Description Chromosome Strand Multiplicon
VV13G09830name=GSVIVG01032741001;chr13+View
VV06G00970name=GSVIVG01024632001;chr6+View

Zea mays

Gene id Description Chromosome Strand Multiplicon
ZM06G22840No description available.6+View
ZM03G28100No description available.3+View
ZM08G32660No description available.8+View
ZM06G26430No description available.6+View


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Gene id
Species
Description
Chromosome
Strand