Gene: AT5G07120 (Arabidopsis thaliana)

Overview top

Gene Identifier
AT5G07120
Transcript Identifier
AT5G07120.1
Gene Type
Coding gene
Location
5 : 2207065-2209355 : negative

Family

Gene family
HOM03D002611
(69 genes in 31 species)
specific family
Subfamily
ORTHO03D001394
(51 genes in 28 species)
specific family
Duplication type
Block duplicate

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Descriptions

Description
sorting nexin 2B
Curated Summary
Encodes sorting nexin SNX2b. SNX2b is peripherally associated with membranes. Involved in vesicular trafficking from endosomes to the vacuole.
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Identifiers

Identifier Name
aliasSNX2b
aliassorting nexin 2B
uniprotB9DFS6

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Biological Process

GO termEvidence(s)ProviderDescriptionSource
GO:0035556ISSGene Ontologyintracellular signal transduction1
GO:0016192IMPUniProtvesicle-mediated transport1 2 3 4 5 6 7
GO:0045324IMPUniProtlate endosome to vacuole transport1 2 3 4 5 6 7
GO:0032502IGIGene Ontologydevelopmental process1
GO:0051604IMPUniProtprotein maturation1 2 3 4 5 6 7
GO:0090351IGIUniProtseedling development1 2 3 4 5 6 7
GO:0007154IEAUniProtcell communication1 2 3 4 5 6
GO:0015031IEAUniProtprotein transport1 2 3 4 5 6

Molecular Function

GO termEvidence(s)ProviderDescriptionSource
GO:0005543IDAUniProtphospholipid binding1 2 3 4 5 6 7
GO:0005515IPI, IEAGene Ontologyprotein binding1
GO:0046982IPIGene Ontologyprotein heterodimerization activity1
GO:0035091IEAUniProtphosphatidylinositol binding1 2 3 4 5 6
GO:0043621ISOPLAZA Tree-based Orthologyprotein self-associationAT5G58440

Cellular Component

GO termEvidence(s)ProviderDescriptionSource
GO:0005634ISMGene Ontologynucleus1
GO:0030904TASUniProtretromer complex1 2 3 4 5 6 7
GO:0016020IDAGene Ontologymembrane1
GO:0005829IDAUniProtcytosol1 2 3 4 5 6 7
GO:0032585IDAUniProtmultivesicular body membrane1 2 3 4 5 6 7
GO:0005794IEAUniProtGolgi apparatus1 2 3 4 5 6

Color Legend

Experimental Evidence
Electronic Evidence
Computational Reviewed Evidence
GO Sources:   Primary     Orthology     Homology  
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InterPro Description
IPR015404Vps5 C-terminal
IPR001683Phox homologous domain

Mapman id Description
17.2.2hormone metabolism.auxin.signal transduction
No SignalP domains detected for this gene.