Anchorpoints
- Gene id
- SL09G074120
- Organism
- Solanum lycopersicum
Paralogs (intra-species colinear regions)
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
SL06G008900 | Inhibitor of apoptosis protein (AGAP011326-PA) (AHRD V1 *--- Q7QHS1_ANOGA)%3B contains Interpro domain(s) IPR001841 Zinc finger%2C RING-type | ch06 | - | View |
SL01G080430 | Baculoviral IAP repeat-containing 2 (AHRD V1 *--- Q38JA8_CANFA)%3B contains Interpro domain(s) IPR001841 Zinc finger%2C RING-type | ch01 | + | View |
Orthologs (inter-species colinear regions)
Arabidopsis lyrata
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
AL6G38250 | No description available. | scaffold_6 | - | View |
Arabidopsis thaliana
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
AT1G03365 | RING/U-box superfamily protein; FUNCTIONS IN: zinc ion binding; CONTAINS InterPro DOMAIN/s: Zinc finger, RING-type (InterPro:IPR001841); BEST Arabidopsis thaliana protein match is: RING/U-box superfamily protein (TAIR:AT4G03000.2). RING/U-box superfamily protein | 1 | + | View |
AT4G03000 | RING/U-box superfamily protein RING/U-box superfamily protein; FUNCTIONS IN: zinc ion binding; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; CONTAINS InterPro DOMAIN/s: Zinc finger, RING-type (InterPro:IPR001841); BEST Arabidopsis thaliana protein match is: RING/U-box superfamily protein (TAIR:AT1G03365.1); Has 47741 Blast hits to 30371 proteins in 2147 species: Archae - 425; Bacteria - 7273; Metazoa - 21635; Fungi - 3461; Plants - 2162; Viruses - 230; Other Eukaryotes - 12555 (source: NCBI BLink). | 4 | + | View |
Brassica rapa
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
BR10G04840 | No description available. | A10 | - | View |
Carica papaya
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
CP00016G00740 | No description available. | supercontig_16 | + | View |
CP00009G01280 | No description available. | supercontig_9 | + | View |
Capsella rubella
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
CRU_006G32840 | No description available. | scaffold_6 | - | View |
CRU_001G02330 | No description available. | scaffold_1 | + | View |
Citrus sinensis
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
CS00001G08760 | No description available. | scaffold00001 | - | View |
Fragaria vesca
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
FV2G25910 | MND1-interacting protein 1 (AtMIP1) (probable) | LG2 | + | View |
Glycine max
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
GM13G28330 | No description available. | Gm13 | + | View |
GM02G16940 | No description available. | Gm02 | + | View |
Gossypium raimondii
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
GR08G00620 | No description available. | Chr08 | + | View |
GR05G05610 | No description available. | Chr05 | + | View |
Malus domestica
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
MD11G027030 | No description available. | 11 | + | View |
Manihot esculenta
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
ME05019G00400 | No description available. | scaffold05019 | + | View |
ME04457G01470 | No description available. | scaffold04457 | - | View |
ME01551G02890 | No description available. | scaffold01551 | + | View |
Medicago truncatula
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
MT2G020870 | E3 ubiquitin-protein ligase RF298-like protein C putative | chr2 | - | View |
MT1G089740 | E3 ubiquitin-protein ligase RF298-like protein C putative | chr1 | - | View |
Prunus persica
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
PPE_008G26120 | No description available. | scaffold_8 | + | View |
Populus trichocarpa
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
PT08G19830 | No description available. | Chr08 | - | View |
Ricinus communis
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
RC29703G00680 | No description available. | 29703 | - | View |
RC29726G00560 | No description available. | 29726 | + | View |
Solanum tuberosum
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
ST09G021660 | Baculoviral IAP repeat-containing 2 (AHRD V1 *--- Q6P6S1_RAT); contains Interpro domain(s) IPR001841 Zinc finger, RING-type | chr09 | + | View |
ST01G022590 | Baculoviral IAP repeat-containing 2 (AHRD V1 *--- Q38JA8_CANFA); contains Interpro domain(s) IPR001841 Zinc finger, RING-type | chr01 | - | View |
Theobroma cacao
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
TC0001G28490 | No description available. | scaffold_1 | + | View |
TC0004G27440 | No description available. | scaffold_4 | + | View |
Thellungiella parvula
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
TP6G03040 | similar to AT4G03000|protein binding / zinc ion binding | ch6-1 | + | View |
TP1G02370 | similar to AT4G03000|protein binding / zinc ion binding | ch1-1 | + | View |