Anchorpoints

Gene id
SL09G011920
Organism
Solanum lycopersicum

Paralogs (intra-species colinear regions)

No paralogous anchorpoints available


Orthologs (inter-species colinear regions)

Arabidopsis lyrata

Gene id Description Chromosome Strand Multiplicon
AL5G24150No description available.scaffold_5+View

Arabidopsis thaliana

Gene id Description Chromosome Strand Multiplicon
AT3G54110Member of Uncoupling protein PUMP2 family. Encodes a mitochondrial uncoupling protein AtUCP1 involved in maintain the redox poise of the mitochondrial electron transport chain to facilitate photosynthetic metabolism. Disruption of UCP1 results in a photosynthetic phenotype. Specifically there is a restriction in photorespiration with a decrease in the rate of oxidation of photorespiratory glycine in the mitochondrion. This change leads to an associated reduced photosynthetic carbon assimilation rate. plant uncoupling mitochondrial protein 1 (PUMP1); FUNCTIONS IN: oxidative phosphorylation uncoupler activity, binding; INVOLVED IN: transport, photosynthesis, photorespiration; LOCATED IN: mitochondrion, mitochondrial inner membrane, plasma membrane, chloroplast; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Mitochondrial substrate carrier (InterPro:IPR001993), Mitochondrial brown fat uncoupling protein (InterPro:IPR002030), Mitochondrial substrate/solute carrier (InterPro:IPR018108); BEST Arabidopsis thaliana protein match is: uncoupling protein 2 (TAIR:AT5G58970.1); Has 26567 Blast hits to 13376 proteins in 459 species: Archae - 0; Bacteria - 2; Metazoa - 11203; Fungi - 7876; Plants - 4909; Viruses - 3; Other Eukaryotes - 2574 (source: NCBI BLink). plant uncoupling mitochondrial protein 13+View
AT5G01340Mitochondrial substrate carrier family protein Mitochondrial substrate carrier family protein; FUNCTIONS IN: transporter activity, binding; INVOLVED IN: transport, mitochondrial transport, transmembrane transport; LOCATED IN: mitochondrial inner membrane, membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Mitochondrial substrate carrier (InterPro:IPR001993), Mitochondrial substrate/solute carrier (InterPro:IPR018108), Adenine nucleotide translocator 1 (InterPro:IPR002113); BEST Arabidopsis thaliana protein match is: Mitochondrial substrate carrier family protein (TAIR:AT2G37890.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).5-View

Brassica rapa

Gene id Description Chromosome Strand Multiplicon
BR09G35140No description available.A09+View
BR07G14110No description available.A07+View

Beta vulgaris

Gene id Description Chromosome Strand Multiplicon
BV7G05620No description available.Bvchr7.sca021-View

Citrullus lanatus

Gene id Description Chromosome Strand Multiplicon
CL04G07270No description available.Chr4-View

Carica papaya

Gene id Description Chromosome Strand Multiplicon
CP00112G00780No description available.supercontig_112-View
CP00056G00840No description available.supercontig_56+View

Capsella rubella

Gene id Description Chromosome Strand Multiplicon
CRU_005G19460No description available.scaffold_5+View
CRU_006G00460No description available.scaffold_6+View

Citrus sinensis

Gene id Description Chromosome Strand Multiplicon
CS00026G00610No description available.scaffold00026+View
CS00083G00590No description available.scaffold00083+View

Eucalyptus grandis

Gene id Description Chromosome Strand Multiplicon
EG0011G25260No description available.scaffold_11-View

Fragaria vesca

Gene id Description Chromosome Strand Multiplicon
FV3G21550Mitochondrial uncoupling protein 3 (UCP 3) (probable)LG3+View
FV6G11360Mitochondrial uncoupling protein 3 (UCP 3) (probable)LG6-View

Glycine max

Gene id Description Chromosome Strand Multiplicon
GM07G17380No description available.Gm07+View
GM18G42217No description available.Gm18+View
GM01G27120No description available.Gm01+View
GM03G14780No description available.Gm03-View

Gossypium raimondii

Gene id Description Chromosome Strand Multiplicon
GR12G11100No description available.Chr12+View

Malus domestica

Gene id Description Chromosome Strand Multiplicon
MD03G005790No description available.3-View
MD11G006760No description available.11-View

Manihot esculenta

Gene id Description Chromosome Strand Multiplicon
ME03651G00230No description available.scaffold03651-View
ME06512G02770No description available.scaffold06512-View

Medicago truncatula

Gene id Description Chromosome Strand Multiplicon
MT7G066690uncoupling proteinchr7+View
MT3G462140uncoupling proteinchr3+View

Prunus persica

Gene id Description Chromosome Strand Multiplicon
PPE_006G27620No description available.scaffold_6+View

Populus trichocarpa

Gene id Description Chromosome Strand Multiplicon
PT01G24780No description available.Chr01+View
PT06G09550No description available.Chr06+View
PT16G11010No description available.Chr16+View

Ricinus communis

Gene id Description Chromosome Strand Multiplicon
RC27798G00130No description available.27798-View
RC29751G00180No description available.29751-View

Solanum tuberosum

Gene id Description Chromosome Strand Multiplicon
ST09G011960Mitochondrial uncoupling protein (AHRD V1 ***- O24391_SOLTU); contains Interpro domain(s) IPR018108 Mitochondrial substrate/solute carrier IPR001993 Mitochondrial substrate carrierchr09-View

Theobroma cacao

Gene id Description Chromosome Strand Multiplicon
TC0005G02310No description available.scaffold_5-View
TC0009G30250No description available.scaffold_9-View

Thellungiella parvula

Gene id Description Chromosome Strand Multiplicon
TP5G08280similar to AT3G54110|PUMP1 (PLANT UNCOUPLING MITOCHONDRIAL PROTEIN 1)ch5-1-View

Vitis vinifera

Gene id Description Chromosome Strand Multiplicon
VV08G13420name=GSVIVG01034022001;chr8+View
VV06G02410name=GSVIVG01024813001;chr6+View


Download

Gene id
Species
Description
Chromosome
Strand