Anchorpoints
- Gene id
- SL08G082310
- Organism
- Solanum lycopersicum
Paralogs (intra-species colinear regions)
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
SL01G095810 | Ring H2 finger protein (AHRD V1 *-*- D9ZHD8_HYPPE)%3B contains Interpro domain(s) IPR001841 Zinc finger%2C RING-type | ch01 | - | View |
SL03G083460 | RING finger protein (AHRD V1 *-*- C6EUD3_SOYBN)%3B contains Interpro domain(s) IPR018957 Zinc finger%2C C3HC4 RING-type | ch03 | + | View |
Orthologs (inter-species colinear regions)
Arabidopsis lyrata
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
AL4G34610 | No description available. | scaffold_4 | - | View |
AL8G17700 | No description available. | scaffold_8 | + | View |
Arabidopsis thaliana
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
AT2G46493 | RING/U-box superfamily protein RING/U-box superfamily protein; FUNCTIONS IN: zinc ion binding; CONTAINS InterPro DOMAIN/s: Zinc finger, RING-type (InterPro:IPR001841), Zinc finger, C3HC4 RING-type (InterPro:IPR018957); BEST Arabidopsis thaliana protein match is: RING/U-box superfamily protein (TAIR:AT2G46494.1). | 2 | - | View |
AT5G53110 | RING/U-box superfamily protein RING/U-box superfamily protein; FUNCTIONS IN: zinc ion binding; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 8 plant structures; EXPRESSED DURING: 4 anthesis, C globular stage, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Zinc finger, RING-type (InterPro:IPR001841), Zinc finger, C3HC4 RING-type (InterPro:IPR018957); BEST Arabidopsis thaliana protein match is: RING/U-box superfamily protein (TAIR:AT2G46495.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). | 5 | + | View |
Brassica rapa
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
BR10G07060 | No description available. | A10 | + | View |
Beta vulgaris
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
BV5G05990 | No description available. | Bvchr5.sca002 | + | View |
BV3G02310 | No description available. | Bvchr3.sca003 | + | View |
Citrullus lanatus
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
CL07G18270 | No description available. | Chr7 | + | View |
CL05G01040 | No description available. | Chr5 | + | View |
Cucumis melo
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
CM00027G02370 | No description available. | CM3.5_scaffold00027 | - | View |
Carica papaya
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
CP00096G00080 | No description available. | supercontig_96 | - | View |
CP00003G00660 | No description available. | supercontig_3 | - | View |
Capsella rubella
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
CRU_008G13010 | No description available. | scaffold_8 | + | View |
Citrus sinensis
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
CS00001G04270 | No description available. | scaffold00001 | - | View |
Eucalyptus grandis
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
EG0004G13920 | No description available. | scaffold_4 | - | View |
EG0005G07330 | No description available. | scaffold_5 | - | View |
EG0005G00500 | No description available. | scaffold_5 | + | View |
Fragaria vesca
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
FV7G05900 | RING-H2 finger protein ATL1E (probable) | LG7 | + | View |
FV5G05180 | RING-H2 finger protein ATL1E (probable) | LG5 | - | View |
Glycine max
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
GM07G06201 | No description available. | Gm07 | + | View |
GM06G13270 | No description available. | Gm06 | - | View |
GM05G36870 | No description available. | Gm05 | - | View |
GM16G02821 | No description available. | Gm16 | + | View |
Gossypium raimondii
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
GR04G13340 | No description available. | Chr04 | + | View |
GR08G25430 | No description available. | Chr08 | - | View |
GR03G07930 | No description available. | Chr03 | + | View |
Lotus japonicus
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
LJ3G034570 | No description available. | chr3 | - | View |
LJ4G046850 | No description available. | chr4 | + | View |
Malus domestica
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
MD06G010100 | No description available. | 6 | + | View |
MD01G021740 | No description available. | 1 | - | View |
MD02G016970 | No description available. | 2 | - | View |
Manihot esculenta
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
ME06089G00100 | No description available. | scaffold06089 | + | View |
ME03175G00260 | No description available. | scaffold03175 | - | View |
Medicago truncatula
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
MT5G009190 | RING-H2 finger ATL21A-like protein | chr5 | - | View |
MT8G027745 | RING-H2 finger protein ATL21A C putative | chr8 | + | View |
MT8G099495 | RING-H2 finger ATL21A-like protein | chr8 | + | View |
Prunus persica
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
PPE_002G18080 | No description available. | scaffold_2 | - | View |
PPE_005G12700 | No description available. | scaffold_5 | - | View |
Populus trichocarpa
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
PT03G13990 | No description available. | Chr03 | - | View |
PT02G17030 | No description available. | Chr02 | - | View |
PT14G09820 | No description available. | Chr14 | - | View |
PT01G09170 | No description available. | Chr01 | + | View |
PT15G01780 | No description available. | Chr15 | + | View |
PT12G01140 | No description available. | Chr12 | + | View |
Ricinus communis
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
RC30169G02740 | No description available. | 30169 | + | View |
RC30190G05430 | No description available. | 30190 | - | View |
Solanum tuberosum
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
ST03G013410 | RING finger protein 44 (AHRD V1 *-*- RNF44_DANRE); contains Interpro domain(s) IPR018957 Zinc finger, C3HC4 RING-type | chr03 | + | View |
ST08G028060 | RING finger protein (AHRD V1 *-*- C6EUD3_SOYBN); contains Interpro domain(s) IPR018957 Zinc finger, C3HC4 RING-type | chr08 | + | View |
ST01G033250 | RING finger protein 44 (AHRD V1 *-*- RNF44_HUMAN); contains Interpro domain(s) IPR001841 Zinc finger, RING-type | chr01 | - | View |
Theobroma cacao
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
TC0001G34090 | No description available. | scaffold_1 | + | View |
TC0003G19600 | No description available. | scaffold_3 | - | View |
TC0003G29270 | No description available. | scaffold_3 | - | View |
Thellungiella parvula
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
TP6G15280 | No description available. | ch6-6 | + | View |
TP5G01650 | similar to AT2G25410|protein binding / zinc ion binding | ch5-1 | + | View |
Vitis vinifera
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
VV02G04580 | name=GSVIVG01019530001; | chr2 | - | View |
VV15G06320 | name=GSVIVG01027094001; | chr15 | + | View |
VV16G00040 | name=GSVIVG01001021001; | chr16 | + | View |