Anchorpoints
- Gene id
- SL03G119040
- Organism
- Solanum lycopersicum
Paralogs (intra-species colinear regions)
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
SL06G069010 | Guanine nucleotide-binding protein beta subunit-like protein (AHRD V1 **-* B6SJ21_MAIZE)%3B contains Interpro domain(s) IPR020472 G-protein beta WD-40 repeat%2C region | ch06 | + | View |
Orthologs (inter-species colinear regions)
Arabidopsis lyrata
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
AL3G19570 | No description available. | scaffold_3 | - | View |
Arabidopsis thaliana
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
AT1G18080 | Transducin/WD40 repeat-like superfamily protein Encodes the Arabidopsis thaliana homolog of the tobacco WD-40 repeat ArcA gene. Knockout mutants show insensitivity to gibberellin in GA-induced seed germination. ATARCA; FUNCTIONS IN: nucleotide binding; INVOLVED IN: response to cadmium ion; LOCATED IN: cytosolic ribosome, chloroplast, heterotrimeric G-protein complex; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: WD40 repeat 2 (InterPro:IPR019782), WD40 repeat, conserved site (InterPro:IPR019775), WD40 repeat (InterPro:IPR001680), G-protein beta WD-40 repeat, region (InterPro:IPR020472), WD40 repeat-like-containing domain (InterPro:IPR011046), WD40-repeat-containing domain (InterPro:IPR017986), WD40/YVTN repeat-like-containing domain (InterPro:IPR015943), WD40 repeat, subgroup (InterPro:IPR019781); BEST Arabidopsis thaliana protein match is: receptor for activated C kinase 1B (TAIR:AT1G48630.1); Has 86693 Blast hits to 36128 proteins in 955 species: Archae - 98; Bacteria - 10140; Metazoa - 33986; Fungi - 19643; Plants - 11429; Viruses - 3; Other Eukaryotes - 11394 (source: NCBI BLink). | 1 | + | View |
AT1G48630 | receptor for activated C kinase 1B (RACK1B_AT); FUNCTIONS IN: nucleotide binding; INVOLVED IN: shoot development, root development; LOCATED IN: cytosolic ribosome; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: WD40 repeat 2 (InterPro:IPR019782), WD40 repeat, conserved site (InterPro:IPR019775), WD40 repeat (InterPro:IPR001680), G-protein beta WD-40 repeat, region (InterPro:IPR020472), WD40 repeat-like-containing domain (InterPro:IPR011046), WD40-repeat-containing domain (InterPro:IPR017986), WD40/YVTN repeat-like-containing domain (InterPro:IPR015943), WD40 repeat, subgroup (InterPro:IPR019781); BEST Arabidopsis thaliana protein match is: receptor for activated C kinase 1C (TAIR:AT3G18130.1); Has 89864 Blast hits to 37441 proteins in 950 species: Archae - 80; Bacteria - 10219; Metazoa - 35696; Fungi - 20361; Plants - 11462; Viruses - 9; Other Eukaryotes - 12037 (source: NCBI BLink). Encodes a protein with similarity to mammalian RACKs. RACKs function to shuttle activated protein kinase C to different subcellular sites and may also function as a scaffold through physical interactions with other proteins. RACK1B has no phenotype on its own and probably acts redundantly with RACK1A and RACK1C. receptor for activated C kinase 1B | 1 | - | View |
Brassica rapa
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
BR01G31500 | No description available. | A01 | + | View |
BR09G46310 | No description available. | A09 | - | View |
BR06G12850 | No description available. | A06 | + | View |
BR05G25580 | No description available. | A05 | + | View |
BR05G18650 | No description available. | A05 | + | View |
BR06G04040 | No description available. | A06 | + | View |
Citrullus lanatus
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
CL06G15020 | No description available. | Chr6 | - | View |
Cucumis melo
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
CM00030G02690 | No description available. | CM3.5_scaffold00030 | - | View |
Carica papaya
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
CP00003G04250 | No description available. | supercontig_3 | + | View |
Capsella rubella
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
CRU_003G17070 | No description available. | scaffold_3 | - | View |
CRU_001G35810 | No description available. | scaffold_1 | - | View |
CRU_001G16980 | No description available. | scaffold_1 | + | View |
Citrus sinensis
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
CS00044G00240 | No description available. | scaffold00044 | + | View |
Eucalyptus grandis
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
EG0011G18760 | No description available. | scaffold_11 | + | View |
EG0002G07120 | No description available. | scaffold_2 | + | View |
Fragaria vesca
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
FV5G16990 | Guanine nucleotide-binding protein subunit beta-like protein (similar to) | LG5 | - | View |
Glycine max
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
GM05G34070 | No description available. | Gm05 | - | View |
GM08G05610 | No description available. | Gm08 | + | View |
GM07G11340 | No description available. | Gm07 | - | View |
Gossypium raimondii
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
GR06G19260 | No description available. | Chr06 | - | View |
Lotus japonicus
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
LJ4G050990 | No description available. | chr4 | + | View |
Malus domestica
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
MD06G018870 | No description available. | 6 | + | View |
MD14G021690 | No description available. | 14 | + | View |
Medicago truncatula
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
MT8G106790 | guanine nucleotide-binding protein beta subunit-like protein | chr8 | + | View |
Prunus persica
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
PPE_005G23120 | No description available. | scaffold_5 | + | View |
Populus trichocarpa
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
PT15G04160 | No description available. | Chr15 | - | View |
PT12G04960 | No description available. | Chr12 | - | View |
Ricinus communis
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
RC29654G00070 | No description available. | 29654 | + | View |
Solanum tuberosum
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
ST12G018630 | Guanine nucleotide-binding protein beta subunit-like protein (AHRD V1 **-* B6SJ21_MAIZE); contains Interpro domain(s) IPR017986 WD40 repeat, region | chr12 | + | View |
ST03G032510 | Guanine nucleotide-binding protein beta subunit-like protein (AHRD V1 **-* B6SJ21_MAIZE); contains Interpro domain(s) IPR017986 WD40 repeat, region | chr03 | - | View |
ST06G025890 | Guanine nucleotide-binding protein beta subunit-like protein (AHRD V1 **-* B6SJ21_MAIZE); contains Interpro domain(s) IPR017986 WD40 repeat, region | chr06 | - | View |
Thellungiella parvula
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
TP1G35600 | similar to AT1G48630|RACK1B_AT (RECEPTOR FOR ACTIVATED C KINASE 1 B) | ch1-2 | - | View |
TP3G16240 | similar to AT3G18130|RACK1C_AT (RECEPTOR FOR ACTIVATED C KINASE 1 C) | ch3-1 | - | View |
TP1G16100 | similar to AT1G18080|ATARCA | ch1-1 | + | View |