Anchorpoints

Gene id
PT07G13830
Organism
Populus trichocarpa

Paralogs (intra-species colinear regions)

Gene id Description Chromosome Strand Multiplicon
PT17G01340No description available.Chr17+View


Orthologs (inter-species colinear regions)

Arabidopsis lyrata

Gene id Description Chromosome Strand Multiplicon
AL1G03110No description available.scaffold_1+View
AL8G05640No description available.scaffold_8+View

Arabidopsis thaliana

Gene id Description Chromosome Strand Multiplicon
AT1G03790Zinc finger C-x8-C-x5-C-x3-H type family protein Encodes SOMNUS (SOM), a nucleus-localized CCCH-type zinc finger protein. SOM negatively regulates light-dependent seed germination downstream of PIL5 (AT2G20180). SOMNUS (SOM); CONTAINS InterPro DOMAIN/s: Zinc finger, CCCH-type (InterPro:IPR000571); BEST Arabidopsis thaliana protein match is: Zinc finger C-x8-C-x5-C-x3-H type family protein (TAIR:AT5G44260.1); Has 3270 Blast hits to 1059 proteins in 150 species: Archae - 0; Bacteria - 0; Metazoa - 444; Fungi - 30; Plants - 421; Viruses - 3; Other Eukaryotes - 2372 (source: NCBI BLink).1+View
AT5G44260Zinc finger C-x8-C-x5-C-x3-H type family protein Zinc finger C-x8-C-x5-C-x3-H type family protein; CONTAINS InterPro DOMAIN/s: Zinc finger, CCCH-type (InterPro:IPR000571); BEST Arabidopsis thaliana protein match is: Zinc finger C-x8-C-x5-C-x3-H type family protein (TAIR:AT1G03790.1); Has 1182 Blast hits to 968 proteins in 143 species: Archae - 0; Bacteria - 0; Metazoa - 415; Fungi - 15; Plants - 396; Viruses - 3; Other Eukaryotes - 353 (source: NCBI BLink).5-View

Brassica rapa

Gene id Description Chromosome Strand Multiplicon
BR06G38180No description available.A06+View
BR08G31630No description available.A08-View
BR10G03860No description available.A10-View

Citrullus lanatus

Gene id Description Chromosome Strand Multiplicon
CL07G00940No description available.Chr7+View

Cucumis melo

Gene id Description Chromosome Strand Multiplicon
CM00034G03340No description available.CM3.5_scaffold00034+View

Capsella rubella

Gene id Description Chromosome Strand Multiplicon
CRU_008G04170No description available.scaffold_8+View
CRU_001G02700No description available.scaffold_1+View

Citrus sinensis

Gene id Description Chromosome Strand Multiplicon
CS00643G00010No description available.scaffold00643-View

Eucalyptus grandis

Gene id Description Chromosome Strand Multiplicon
EG0001G15200No description available.scaffold_1+View

Glycine max

Gene id Description Chromosome Strand Multiplicon
GM12G13300No description available.Gm12+View
GM13G37101No description available.Gm13-View
GM06G44440No description available.Gm06-View
GM12G33320No description available.Gm12+View

Gossypium raimondii

Gene id Description Chromosome Strand Multiplicon
GR02G02010No description available.Chr02+View

Malus domestica

Gene id Description Chromosome Strand Multiplicon
MD09G027940No description available.9-View
MD17G017710No description available.17-View

Manihot esculenta

Gene id Description Chromosome Strand Multiplicon
ME02307G00340No description available.scaffold02307-View

Medicago truncatula

Gene id Description Chromosome Strand Multiplicon
MT2G090605zinc finger CCCH domain proteinchr2-View
MT4G078660zinc finger C-x8-C-x5-C-x3-H type family proteinchr4+View

Prunus persica

Gene id Description Chromosome Strand Multiplicon
PPE_009G01200No description available.scaffold_9+View

Ricinus communis

Gene id Description Chromosome Strand Multiplicon
RC29983G00490No description available.29983-View

Solanum lycopersicum

Gene id Description Chromosome Strand Multiplicon
SL07G053750Zinc finger CCCH domain-containing protein 2 (AHRD V1 *-*- C3H2_ARATH)%3B contains Interpro domain(s) IPR000571 Zinc finger%2C CCCH-typech07-View

Theobroma cacao

Gene id Description Chromosome Strand Multiplicon
TC0002G17840No description available.scaffold_2+View

Thellungiella parvula

Gene id Description Chromosome Strand Multiplicon
TP2G09070similar to AT5G44260|zinc finger (CCCH-type) family proteinch2-4-View
TP1G02650similar to AT1G03790|SOM (SOMNUS)ch1-1+View


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Gene id
Species
Description
Chromosome
Strand