Gene: AT1G03790 (Arabidopsis thaliana)

Overview top

Gene Identifier
AT1G03790
Transcript Identifier
AT1G03790.1
Gene Type
Coding gene
Location
1 : 954589-955770 : positive

Family

Gene family
HOM03D000286
(398 genes in 31 species)
specific family
Subfamily
ORTHO03D007854
(30 genes in 23 species)
specific family
Duplication type
Block duplicate

Loading...please wait

Descriptions

Description
Zinc finger C-x8-C-x5-C-x3-H type family protein
Curated Summary
Encodes SOMNUS (SOM), a nucleus-localized CCCH-type zinc finger protein. SOM negatively regulates light-dependent seed germination downstream of PIL5 (AT2G20180).
Show more...

Identifiers

Identifier Name
aliasSOMNUS
aliasSOM
aliasTandem CCCH Zinc Finger protein 4
aliasAtTZF4
aliasTZF4
uniprotQ9ZWA1

Toolbox

Explore

View

 

Biological Process

GO termEvidence(s)ProviderDescriptionSource
GO:0006355RCA, TASGene Ontologyregulation of transcription, DNA-dependent1 2
GO:0010187IMPUniProtnegative regulation of seed germination1 2 3 4 5 6
GO:0006351IEAUniProttranscription, DNA-templated1 2 3 4 5

Molecular Function

GO termEvidence(s)ProviderDescriptionSource
GO:0003676ISSGene Ontologynucleic acid binding1
GO:0003700ISSUniProtsequence-specific DNA binding transcription factor activity1 2 3 4 5 6
GO:0046872IEAUniProtmetal ion binding1 2 3 4 5
GO:0003677IEAUniProtDNA binding1 2 3 4 5
GO:0005515IEAPLAZA Homologyprotein bindingHOM03D000286

Cellular Component

GO termEvidence(s)ProviderDescriptionSource
GO:0005634IDA, ISM, UniProtnucleus1 2 3 4 5 6 7

Color Legend

Experimental Evidence
Electronic Evidence
Computational Reviewed Evidence
GO Sources:   Primary     Orthology     Homology  
Show redundant parents:  
 
InterPro Description
IPR000571Zinc finger, CCCH-type

Mapman id Description
27.3.12RNA.regulation of transcription.C3H zinc finger family
No SignalP domains detected for this gene.
DatabaseType
PlnTFDBC3H
PlantTFDBC3H