Anchorpoints
- Gene id
- PT01G04440
- Organism
- Populus trichocarpa
Paralogs (intra-species colinear regions)
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
PT18G10690 | No description available. | Chr18 | + | View |
PT03G18230 | No description available. | Chr03 | - | View |
PT06G18470 | No description available. | Chr06 | + | View |
Orthologs (inter-species colinear regions)
Arabidopsis lyrata
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
AL8G23780 | No description available. | scaffold_8 | + | View |
AL1G16860 | No description available. | scaffold_1 | - | View |
AL2G28940 | No description available. | scaffold_2 | + | View |
Arabidopsis thaliana
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
AT1G80850 | DNA glycosylase superfamily protein; FUNCTIONS IN: DNA-3-methyladenine glycosylase I activity, catalytic activity; INVOLVED IN: DNA repair, base-excision repair; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: DNA glycosylase (InterPro:IPR011257), Methyladenine glycosylase (InterPro:IPR005019); BEST Arabidopsis thaliana protein match is: DNA glycosylase superfamily protein (TAIR:AT1G15970.1); Has 3667 Blast hits to 3667 proteins in 1573 species: Archae - 10; Bacteria - 3168; Metazoa - 4; Fungi - 0; Plants - 164; Viruses - 0; Other Eukaryotes - 321 (source: NCBI BLink). DNA glycosylase superfamily protein | 1 | - | View |
AT5G57970 | DNA glycosylase superfamily protein DNA glycosylase superfamily protein; FUNCTIONS IN: DNA-3-methyladenine glycosylase I activity, catalytic activity; INVOLVED IN: DNA repair, base-excision repair; EXPRESSED IN: 10 plant structures; EXPRESSED DURING: 6 growth stages; CONTAINS InterPro DOMAIN/s: DNA glycosylase (InterPro:IPR011257), Methyladenine glycosylase (InterPro:IPR005019); BEST Arabidopsis thaliana protein match is: DNA glycosylase superfamily protein (TAIR:AT1G80850.1); Has 3809 Blast hits to 3727 proteins in 1589 species: Archae - 10; Bacteria - 3189; Metazoa - 57; Fungi - 9; Plants - 164; Viruses - 0; Other Eukaryotes - 380 (source: NCBI BLink). | 5 | + | View |
AT1G15970 | DNA glycosylase superfamily protein; FUNCTIONS IN: DNA-3-methyladenine glycosylase I activity, catalytic activity; INVOLVED IN: DNA repair, base-excision repair; LOCATED IN: cellular_component unknown; CONTAINS InterPro DOMAIN/s: DNA glycosylase (InterPro:IPR011257), Methyladenine glycosylase (InterPro:IPR005019); BEST Arabidopsis thaliana protein match is: DNA glycosylase superfamily protein (TAIR:AT1G80850.1); Has 3684 Blast hits to 3684 proteins in 1581 species: Archae - 10; Bacteria - 3170; Metazoa - 10; Fungi - 2; Plants - 164; Viruses - 0; Other Eukaryotes - 328 (source: NCBI BLink). DNA glycosylase superfamily protein | 1 | - | View |
Amborella trichopoda
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
ATR_00065G01980 | No description available. | scaffold00065 | - | View |
Brassica rapa
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
BR09G47290 | No description available. | A09 | + | View |
BR07G34290 | No description available. | A07 | + | View |
BR08G26930 | No description available. | A08 | + | View |
BR07G18300 | No description available. | A07 | - | View |
Beta vulgaris
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
BV9G18900 | No description available. | Bvchr9.sca026 | + | View |
Citrullus lanatus
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
CL09G02930 | No description available. | Chr9 | - | View |
Cucumis melo
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
CM00060G01130 | No description available. | CM3.5_scaffold00060 | - | View |
Carica papaya
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
CP00010G00640 | No description available. | supercontig_10 | - | View |
CP00046G01590 | No description available. | supercontig_46 | - | View |
Capsella rubella
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
CRU_008G18030 | No description available. | scaffold_8 | + | View |
CRU_001G15070 | No description available. | scaffold_1 | - | View |
CRU_002G25240 | No description available. | scaffold_2 | + | View |
Citrus sinensis
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
CS00068G00720 | No description available. | scaffold00068 | - | View |
Eucalyptus grandis
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
EG0003G02780 | No description available. | scaffold_3 | + | View |
EG0006G33750 | No description available. | scaffold_6 | - | View |
Fragaria vesca
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
FV1G01680 | Probable GMP synthase [glutamine-hydrolyzing] | LG1 | - | View |
Glycine max
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
GM02G36520 | No description available. | Gm02 | + | View |
GM17G08160 | No description available. | Gm17 | - | View |
GM08G23391 | No description available. | Gm08 | - | View |
GM07G02620 | No description available. | Gm07 | + | View |
Gossypium raimondii
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
GR09G12390 | No description available. | Chr09 | + | View |
GR09G05710 | No description available. | Chr09 | + | View |
GR10G11310 | No description available. | Chr10 | - | View |
Lotus japonicus
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
LJ6G013520 | No description available. | chr6 | - | View |
Malus domestica
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
MD02G001450 | No description available. | 2 | + | View |
Manihot esculenta
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
ME02915G00210 | No description available. | scaffold02915 | + | View |
Medicago truncatula
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
MT4G007070 | DNA-3-methyladenine glycosylase I | chr4 | - | View |
MT4G130880 | DNA-3-methyladenine glycosylase I | chr4 | - | View |
Oryza sativa ssp. japonica
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
OS09G25290 | methyladenine glycosylase, putative, expressed | 9 | - | View |
OS06G44050 | methyladenine glycosylase, putative, expressed | 6 | - | View |
Prunus persica
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
PPE_007G27890 | No description available. | scaffold_7 | - | View |
Solanum lycopersicum
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
SL03G116880 | DNA-3-methyladenine glycosylase I (AHRD V1 ***- B6U9I4_MAIZE)%3B contains Interpro domain(s) IPR005019 Methyladenine glycosylase | ch03 | + | View |
SL12G010050 | DNA-3-methyladenine glycosylase I (AHRD V1 ***- B6U9I4_MAIZE)%3B contains Interpro domain(s) IPR005019 Methyladenine glycosylase | ch12 | + | View |
Solanum tuberosum
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
ST12G007830 | DNA-3-methyladenine glycosylase I (AHRD V1 ***- B6U9I4_MAIZE); contains Interpro domain(s) IPR005019 Methyladenine glycosylase | chr12 | - | View |
ST07G006390 | DNA-3-methyladenine glycosylase I (AHRD V1 ***- B6U9I4_MAIZE); contains Interpro domain(s) IPR011257 DNA glycosylase | chr07 | - | View |
ST03G030330 | DNA-3-methyladenine glycosylase I (AHRD V1 ***- B6U9I4_MAIZE); contains Interpro domain(s) IPR005019 Methyladenine glycosylase | chr03 | + | View |
Theobroma cacao
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
TC0009G02940 | No description available. | scaffold_9 | + | View |
TC0006G04040 | No description available. | scaffold_6 | - | View |
Thellungiella parvula
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
TP1G14280 | similar to AT1G15970|methyladenine glycosylase family protein | ch1-1 | - | View |
TP5G34910 | similar to AT1G80850|methyladenine glycosylase family protein | ch5-7 | + | View |
Vitis vinifera
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
VV11G07180 | name=GSVIVG01023602001; | chr11 | - | View |
VV09G00140 | name=GSVIVG01015953001; | chr9 | - | View |
Zea mays
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
ZM07G14350 | No description available. | 7 | - | View |
ZM02G10860 | No description available. | 2 | - | View |