Gene: PT01G04440 (Populus trichocarpa)

Overview top

Gene Identifier
PT01G04440
Transcript Identifier
PT01G04440.1
Gene Type
Coding gene
Location
Chr01 : 3203354-3206490 : positive

Family

Gene family
HOM03D000743
(188 genes in 29 species)
specific family
Duplication type
Block duplicate

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Descriptions

No default description found ...
Description of best ortholog(s):

Identifiers

Identifier Name
pidPotri.001G044400.1
idPAC:27047007

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Biological Process

GO termEvidence(s)ProviderDescriptionSource
GO:0006284IEAGenome Projectbase-excision repair
GO:0006281IEAInterProDNA repair
GO:0033554IEAPLAZA Homologycellular response to stressHOM03D000743
GO:0006259IEAPLAZA HomologyDNA metabolic processHOM03D000743
GO:0006974IEAPLAZA Homologycellular response to DNA damage stimulusHOM03D000743

Molecular Function

GO termEvidence(s)ProviderDescriptionSource
GO:0008725IEAGenome ProjectDNA-3-methyladenine glycosylase activity
GO:0003824IEAInterProcatalytic activity
GO:0003905IEAPLAZA Homologyalkylbase DNA N-glycosylase activityHOM03D000743
GO:0016798IEAPLAZA Homologyhydrolase activity, acting on glycosyl bondsHOM03D000743
GO:0043733IEAPLAZA HomologyDNA-3-methylbase glycosylase activityHOM03D000743
GO:0016799IEAPLAZA Homologyhydrolase activity, hydrolyzing N-glycosyl compoundsHOM03D000743
GO:0019104IEAPLAZA HomologyDNA N-glycosylase activityHOM03D000743

Color Legend

Experimental Evidence
Electronic Evidence
Computational Reviewed Evidence
GO Sources:   Primary     Orthology     Homology  
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InterPro Description
IPR011257DNA glycosylase
IPR005019Methyladenine glycosylase

Mapman id Description
28.2DNA.repair
No SignalP domains detected for this gene.