Anchorpoints

Gene id
LJ6G023820
Organism
Lotus japonicus

Paralogs (intra-species colinear regions)

No paralogous anchorpoints available


Orthologs (inter-species colinear regions)

Arabidopsis lyrata

Gene id Description Chromosome Strand Multiplicon
AL7G27070No description available.scaffold_7+View

Arabidopsis thaliana

Gene id Description Chromosome Strand Multiplicon
AT4G16250phytochrome D (PHYD); CONTAINS InterPro DOMAIN/s: Phytochrome, central region (InterPro:IPR013515), Signal transduction histidine kinase, core (InterPro:IPR005467), PAS fold (InterPro:IPR013767), PAS (InterPro:IPR000014), Phytochrome chromophore attachment domain (InterPro:IPR016132), ATPase-like, ATP-binding domain (InterPro:IPR003594), PAS fold-2 (InterPro:IPR013654), Phytochrome A/B/C/D/E (InterPro:IPR012129), Phytochrome (InterPro:IPR001294), Phytochrome chromophore binding site (InterPro:IPR013516), Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor domain (InterPro:IPR003661), GAF (InterPro:IPR003018); BEST Arabidopsis thaliana protein match is: phytochrome B (TAIR:AT2G18790.1); Has 26426 Blast hits to 26152 proteins in 3833 species: Archae - 221; Bacteria - 20797; Metazoa - 4; Fungi - 482; Plants - 3855; Viruses - 5; Other Eukaryotes - 1062 (source: NCBI BLink). Encodes a phytochrome photoreceptor with a function similar to that of phyB that absorbs the red/far-red part of the light spectrum and is involved in light responses. It cannot compensate for phyB loss in Arabidopsis but can substitute for tobacco phyB in vivo. phytochrome D4-View

Amborella trichopoda

Gene id Description Chromosome Strand Multiplicon
ATR_00003G00440No description available.scaffold00003+View

Beta vulgaris

Gene id Description Chromosome Strand Multiplicon
BV3G04210No description available.Bvchr3.sca003+View

Carica papaya

Gene id Description Chromosome Strand Multiplicon
CP00009G00510No description available.supercontig_9-View

Capsella rubella

Gene id Description Chromosome Strand Multiplicon
CRU_007G24180No description available.scaffold_7+View

Citrus sinensis

Gene id Description Chromosome Strand Multiplicon
CS00016G01390No description available.scaffold00016+View

Glycine max

Gene id Description Chromosome Strand Multiplicon
GM09G03990No description available.Gm09-View
GM15G14980No description available.Gm15-View

Gossypium raimondii

Gene id Description Chromosome Strand Multiplicon
GR11G20020No description available.Chr11+View

Manihot esculenta

Gene id Description Chromosome Strand Multiplicon
ME00708G00460No description available.scaffold00708-View

Medicago truncatula

Gene id Description Chromosome Strand Multiplicon
MT2G034040phytochrome protein Bchr2-View

Prunus persica

Gene id Description Chromosome Strand Multiplicon
PPE_001G11060No description available.scaffold_1-View

Populus trichocarpa

Gene id Description Chromosome Strand Multiplicon
PT10G14590No description available.Chr10+View
PT08G10520No description available.Chr08-View

Ricinus communis

Gene id Description Chromosome Strand Multiplicon
RC29889G00660No description available.29889+View

Theobroma cacao

Gene id Description Chromosome Strand Multiplicon
TC0004G30140No description available.scaffold_4+View

Vitis vinifera

Gene id Description Chromosome Strand Multiplicon
VV05G11540name=GSVIVG01034989001;chr5-View


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Gene id
Species
Description
Chromosome
Strand