Paralogs (intra-species colinear regions)
No paralogous anchorpoints available
Orthologs (inter-species colinear regions)
Arabidopsis lyrata
Gene id |
Description |
Chromosome |
Strand |
Multiplicon |
AL7G02210 | No description available. | scaffold_7 | + | View |
AL8G08870 | No description available. | scaffold_8 | - | View |
Arabidopsis thaliana
Gene id |
Description |
Chromosome |
Strand |
Multiplicon |
AT1G43980 | Tetratricopeptide repeat (TPR)-like superfamily protein Tetratricopeptide repeat (TPR)-like superfamily protein; CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat (InterPro:IPR002885); BEST Arabidopsis thaliana protein match is: Pentatricopeptide repeat (PPR) superfamily protein (TAIR:AT4G13650.1); Has 35490 Blast hits to 12305 proteins in 148 species: Archae - 0; Bacteria - 0; Metazoa - 8; Fungi - 8; Plants - 35171; Viruses - 0; Other Eukaryotes - 303 (source: NCBI BLink). | 1 | - | View |
AT4G39952 | Pentatricopeptide repeat (PPR) superfamily protein; FUNCTIONS IN: binding; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat (InterPro:IPR002885), Tetratricopeptide-like helical (InterPro:IPR011990); BEST Arabidopsis thaliana protein match is: Tetratricopeptide repeat (TPR)-like superfamily protein (TAIR:AT3G03580.1); Has 47712 Blast hits to 13890 proteins in 262 species: Archae - 2; Bacteria - 17; Metazoa - 157; Fungi - 156; Plants - 46708; Viruses - 0; Other Eukaryotes - 672 (source: NCBI BLink). Pentatricopeptide repeat (PPR) superfamily protein | 4 | + | View |
Brassica rapa
Gene id |
Description |
Chromosome |
Strand |
Multiplicon |
BR03G56590 | No description available. | A03 | + | View |
Capsella rubella
Eucalyptus grandis
Gene id |
Description |
Chromosome |
Strand |
Multiplicon |
EG0008G38650 | No description available. | scaffold_8 | - | View |
Fragaria vesca
Gene id |
Description |
Chromosome |
Strand |
Multiplicon |
FV0G22550 | Pentatricopeptide repeat-containing protein At4g39952, mitochondrial, Precursor (probable) | scf0513168 | - | View |
Populus trichocarpa
Gene id |
Description |
Chromosome |
Strand |
Multiplicon |
PT05G07400 | No description available. | Chr05 | - | View |
Solanum lycopersicum
Gene id |
Description |
Chromosome |
Strand |
Multiplicon |
SL04G012080 | Pentatricopeptide repeat-containing protein (AHRD V1 *-*- D7KGE6_ARALY) | ch04 | + | View |
SL11G008940 | Pentatricopeptide repeat-containing protein (AHRD V1 ***- D7KMD0_ARALY)%3B contains Interpro domain(s) IPR002885 Pentatricopeptide repeat | ch11 | + | View |
Vitis vinifera
Gene id |
Description |
Chromosome |
Strand |
Multiplicon |
VV18G03670 | name=GSVIVG01009047001; | chr18 | + | View |