Anchorpoints

Gene id
GR06G02740
Organism
Gossypium raimondii

Paralogs (intra-species colinear regions)

No paralogous anchorpoints available


Orthologs (inter-species colinear regions)

Arabidopsis thaliana

Gene id Description Chromosome Strand Multiplicon
AT5G14960DP-E2F-like 2 (DEL2); FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription, DNA-dependent; LOCATED IN: nucleus; EXPRESSED IN: 13 plant structures; EXPRESSED DURING: 7 growth stages; CONTAINS InterPro DOMAIN/s: Winged helix-turn-helix transcription repressor DNA-binding (InterPro:IPR011991), Transcription factor E2F/dimerisation partner (TDP) (InterPro:IPR003316), E2F Family (InterPro:IPR015633); BEST Arabidopsis thaliana protein match is: DP-E2F-like protein 3 (TAIR:AT3G01330.1); Has 936 Blast hits to 860 proteins in 115 species: Archae - 0; Bacteria - 0; Metazoa - 583; Fungi - 5; Plants - 220; Viruses - 0; Other Eukaryotes - 128 (source: NCBI BLink). DP-E2F-like 25+View
AT3G01330Member of the E2F transcription factors, (cell cycle genes), key components of the cyclin D/retinoblastoma/E2F pathway. DP-E2F-like protein 3 DP-E2F-like protein 3 (DEL3); FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription, DNA-dependent; LOCATED IN: nucleus, cytoplasm; EXPRESSED IN: 15 plant structures; EXPRESSED DURING: 9 growth stages; CONTAINS InterPro DOMAIN/s: Winged helix-turn-helix transcription repressor DNA-binding (InterPro:IPR011991), Transcription factor E2F/dimerisation partner (TDP) (InterPro:IPR003316), E2F Family (InterPro:IPR015633); BEST Arabidopsis thaliana protein match is: DP-E2F-like 2 (TAIR:AT5G14960.1); Has 1046 Blast hits to 870 proteins in 117 species: Archae - 0; Bacteria - 4; Metazoa - 638; Fungi - 7; Plants - 262; Viruses - 0; Other Eukaryotes - 135 (source: NCBI BLink).3-View

Cucumis melo

Gene id Description Chromosome Strand Multiplicon
CM00001G03350No description available.CM3.5_scaffold00001+View

Carica papaya

Gene id Description Chromosome Strand Multiplicon
CP00014G00750No description available.supercontig_14-View

Capsella rubella

Gene id Description Chromosome Strand Multiplicon
CRU_003G00720No description available.scaffold_3+View

Citrus sinensis

Gene id Description Chromosome Strand Multiplicon
CS00028G00750No description available.scaffold00028-View

Glycine max

Gene id Description Chromosome Strand Multiplicon
GM17G10130No description available.Gm17-View

Ricinus communis

Gene id Description Chromosome Strand Multiplicon
RC29822G00960No description available.29822+View

Solanum lycopersicum

Gene id Description Chromosome Strand Multiplicon
SL02G087310E2F transcription factor-like protein (AHRD V1 ***- Q9LFQ9_ARATH)%3B contains Interpro domain(s) IPR015633 E2F Familych02+View

Solanum tuberosum

Gene id Description Chromosome Strand Multiplicon
ST02G035540Transcription factor Dp-1 (AHRD V1 *-** Q22FZ6_TETTH); contains Interpro domain(s) IPR015633 E2F Familychr02-View

Thellungiella parvula

Gene id Description Chromosome Strand Multiplicon
TP3G00740similar to AT3G01330|DEL3 (DP-E2F-LIKE PROTEIN 3)ch3-1+View
TP6G29080similar to AT5G14960|DEL2 (DP-E2F-LIKE 2)ch6-6-View

Vitis vinifera

Gene id Description Chromosome Strand Multiplicon
VV14G12590name=GSVIVG01032583001;chr14-View


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Gene id
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Description
Chromosome
Strand