Anchorpoints

Gene id
GM17G10760
Organism
Glycine max

Paralogs (intra-species colinear regions)

Gene id Description Chromosome Strand Multiplicon
GM05G01131No description available.Gm05+View
GM02G11781No description available.Gm02-View
GM01G05410No description available.Gm01-View
GM06G20660No description available.Gm06-View
GM18G15421No description available.Gm18+View
GM08G41070No description available.Gm08-View
GM04G33771No description available.Gm04+View


Orthologs (inter-species colinear regions)

Arabidopsis lyrata

Gene id Description Chromosome Strand Multiplicon
AL2G17950No description available.scaffold_2+View
AL5G16410No description available.scaffold_5+View

Arabidopsis thaliana

Gene id Description Chromosome Strand Multiplicon
AT1G69690AtTCP15 is involved in the regulation of endoreduplication. TCP family transcription factor TCP family transcription factor ; FUNCTIONS IN: sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Transcription factor, TCP (InterPro:IPR005333), Transcription factor TCP subgroup (InterPro:IPR017887); BEST Arabidopsis thaliana protein match is: TEOSINTE BRANCHED, cycloidea and PCF (TCP) 14 (TAIR:AT3G47620.1); Has 863 Blast hits to 861 proteins in 131 species: Archae - 0; Bacteria - 6; Metazoa - 120; Fungi - 15; Plants - 698; Viruses - 0; Other Eukaryotes - 24 (source: NCBI BLink).1+View
AT3G47620'TEOSINTE BRANCHED, cycloidea and PCF (TCP) 14' (TCP14); CONTAINS InterPro DOMAIN/s: Transcription factor, TCP (InterPro:IPR005333), Transcription factor TCP subgroup (InterPro:IPR017887); BEST Arabidopsis thaliana protein match is: TCP family transcription factor (TAIR:AT1G58100.1); Has 1158 Blast hits to 1082 proteins in 149 species: Archae - 2; Bacteria - 69; Metazoa - 397; Fungi - 50; Plants - 507; Viruses - 0; Other Eukaryotes - 133 (source: NCBI BLink). TEOSINTE BRANCHED, cycloidea and PCF (TCP) 14 Encodes a transcription factor AtTCP14 that regulates seed germination. AtTCP14 shows elevated expression level just prior to germination. AtTCP14 is predominantly expressed in the vascular tissue of the embryo, and affects gene expression in radicles in a non-cell-autonomous manner.3+View

Amborella trichopoda

Gene id Description Chromosome Strand Multiplicon
ATR_00010G04040No description available.scaffold00010-View

Brassica rapa

Gene id Description Chromosome Strand Multiplicon
BR07G26460No description available.A07+View

Beta vulgaris

Gene id Description Chromosome Strand Multiplicon
BV6G02940No description available.Bvchr6.sca028+View

Citrullus lanatus

Gene id Description Chromosome Strand Multiplicon
CL06G16810No description available.Chr6+View
CL04G12190No description available.Chr4+View
CL05G25340No description available.Chr5+View

Cucumis melo

Gene id Description Chromosome Strand Multiplicon
CM00030G00900No description available.CM3.5_scaffold00030-View
CM00016G04110No description available.CM3.5_scaffold00016-View
CM00001G00610No description available.CM3.5_scaffold00001-View

Capsella rubella

Gene id Description Chromosome Strand Multiplicon
CRU_002G15400No description available.scaffold_2+View
CRU_005G12890No description available.scaffold_5+View

Citrus sinensis

Gene id Description Chromosome Strand Multiplicon
CS00009G00560No description available.scaffold00009-View
CS00003G04150No description available.scaffold00003-View

Eucalyptus grandis

Gene id Description Chromosome Strand Multiplicon
EG0002G28410No description available.scaffold_2-View
EG0002G04020No description available.scaffold_2-View

Fragaria vesca

Gene id Description Chromosome Strand Multiplicon
FV5G13540Transcription factor TCP14 (probable)LG5+View

Gossypium raimondii

Gene id Description Chromosome Strand Multiplicon
GR08G19240No description available.Chr08-View
GR01G07220No description available.Chr01+View
GR07G03680No description available.Chr07-View
GR13G08450No description available.Chr13-View
GR08G18160No description available.Chr08+View

Malus domestica

Gene id Description Chromosome Strand Multiplicon
MD06G015650No description available.6-View
MD16G003950No description available.16+View
MD13G004870No description available.13+View

Manihot esculenta

Gene id Description Chromosome Strand Multiplicon
ME08359G02430No description available.scaffold08359+View
ME12794G02020No description available.scaffold12794-View

Medicago truncatula

Gene id Description Chromosome Strand Multiplicon
MT5G039600TCP family transcription factorchr5-View
MT4G108370TCP family transcription factorchr4-View

Oryza sativa ssp. japonica

Gene id Description Chromosome Strand Multiplicon
OS02G51280TCP-domain protein, putative, expressed2+View

Prunus persica

Gene id Description Chromosome Strand Multiplicon
PPE_001G28400No description available.scaffold_1-View
PPE_005G19610No description available.scaffold_5-View

Ricinus communis

Gene id Description Chromosome Strand Multiplicon
RC30147G07860No description available.30147-View

Solanum lycopersicum

Gene id Description Chromosome Strand Multiplicon
SL05G007420TCP family transcription factor (AHRD V1 *-*- A6MCZ2_9ORYZ)%3B contains Interpro domain(s) IPR005333 Transcription factor%2C TCPch05-View
SL03G116320TCP family transcription factor (AHRD V1 *-*- A6MCZ2_9ORYZ)%3B contains Interpro domain(s) IPR005333 Transcription factor%2C TCPch03+View
SL06G070900TCP family transcription factor (AHRD V1 *-** A6MCZ2_9ORYZ)%3B contains Interpro domain(s) IPR005333 Transcription factor%2C TCPch06+View

Solanum tuberosum

Gene id Description Chromosome Strand Multiplicon
ST06G026900TCP family transcription factor (AHRD V1 *-** A6MCZ2_9ORYZ); contains Interpro domain(s) IPR005333 Transcription factor, TCPchr06+View
ST03G029780TCP family transcription factor (AHRD V1 *-*- A6MCZ2_9ORYZ); contains Interpro domain(s) IPR005333 Transcription factor, TCPchr03+View

Theobroma cacao

Gene id Description Chromosome Strand Multiplicon
TC0003G08710No description available.scaffold_3-View

Thellungiella parvula

Gene id Description Chromosome Strand Multiplicon
TP5G14290similar to AT3G47620|AtTCP14 (TEOSINTE BRANCHED1, CYCLOIDEA and PCF (TCP) 14)ch5-1-View
TP5G24820similar to AT1G69690|TCP family transcription factor, putativech5-6+View

Vitis vinifera

Gene id Description Chromosome Strand Multiplicon
VV01G12270name=GSVIVG01020011001;chr1-View
VV17G03850name=GSVIVG01008023001;chr17-View

Zea mays

Gene id Description Chromosome Strand Multiplicon
ZM09G00890No description available.9-View
ZM05G40330No description available.5+View


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Gene id
Species
Description
Chromosome
Strand