Anchorpoints
- Gene id
- GM10G28551
- Organism
- Glycine max
Paralogs (intra-species colinear regions)
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
GM03G38140 | No description available. | Gm03 | - | View |
GM19G41430 | No description available. | Gm19 | + | View |
GM02G01230 | No description available. | Gm02 | + | View |
GM19G40740 | No description available. | Gm19 | - | View |
Orthologs (inter-species colinear regions)
Arabidopsis lyrata
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
AL1G53260 | No description available. | scaffold_1 | - | View |
Arabidopsis thaliana
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
AT1G56710 | Pectin lyase-like superfamily protein Pectin lyase-like superfamily protein; FUNCTIONS IN: polygalacturonase activity; INVOLVED IN: carbohydrate metabolic process; LOCATED IN: endomembrane system; EXPRESSED IN: stem, embryo, leaf whorl, sepal, pedicel; EXPRESSED DURING: 4 anthesis, C globular stage; CONTAINS InterPro DOMAIN/s: Pectin lyase fold/virulence factor (InterPro:IPR011050), Pectin lyase fold (InterPro:IPR012334), Glycoside hydrolase, family 28 (InterPro:IPR000743), Parallel beta-helix repeat (InterPro:IPR006626); BEST Arabidopsis thaliana protein match is: Pectin lyase-like superfamily protein (TAIR:AT1G02460.1); Has 4176 Blast hits to 4154 proteins in 491 species: Archae - 6; Bacteria - 1245; Metazoa - 14; Fungi - 1278; Plants - 1491; Viruses - 0; Other Eukaryotes - 142 (source: NCBI BLink). | 1 | - | View |
Brassica rapa
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
BR05G27270 | No description available. | A05 | + | View |
BR09G15900 | No description available. | A09 | + | View |
Beta vulgaris
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
BV5G15600 | No description available. | Bvchr5.sca025 | + | View |
BV4G08890 | No description available. | Bvchr4.sca003 | + | View |
Citrullus lanatus
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
CL10G09960 | No description available. | Chr10 | - | View |
CL06G04050 | No description available. | Chr6 | - | View |
CL09G04460 | No description available. | Chr9 | + | View |
Cucumis melo
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
CM00018G01420 | No description available. | CM3.5_scaffold00018 | + | View |
CM00047G01170 | No description available. | CM3.5_scaffold00047 | - | View |
Capsella rubella
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
CRU_002G06810 | No description available. | scaffold_2 | + | View |
Citrus sinensis
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
CS00001G06080 | No description available. | scaffold00001 | + | View |
Eucalyptus grandis
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
EG0008G33120 | No description available. | scaffold_8 | + | View |
EG0008G11290 | No description available. | scaffold_8 | - | View |
Fragaria vesca
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
FV6G03270 | Polygalacturonase At1g48100 (PG), Precursor (similar to) | LG6 | - | View |
Gossypium raimondii
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
GR05G06990 | No description available. | Chr05 | + | View |
GR07G12000 | No description available. | Chr07 | + | View |
GR08G13670 | No description available. | Chr08 | + | View |
GR02G05690 | No description available. | Chr02 | + | View |
GR13G20910 | No description available. | Chr13 | - | View |
Lotus japonicus
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
LJ1G070120 | No description available. | chr1 | + | View |
Manihot esculenta
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
ME07571G00800 | No description available. | scaffold07571 | + | View |
ME00708G00050 | No description available. | scaffold00708 | - | View |
ME10305G00620 | No description available. | scaffold10305 | - | View |
ME00080G00240 | No description available. | scaffold00080 | - | View |
Medicago truncatula
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
MT7G110050 | polygalacturonase/glycoside hydrolase family protein | chr7 | - | View |
Oryza sativa ssp. japonica
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
OS01G19170 | polygalacturonase, putative, expressed | 1 | + | View |
Prunus persica
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
PPE_006G31280 | No description available. | scaffold_6 | + | View |
PPE_001G10450 | No description available. | scaffold_1 | - | View |
Populus trichocarpa
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
PT08G10050 | No description available. | Chr08 | - | View |
PT13G00500 | No description available. | Chr13 | + | View |
PT05G00550 | No description available. | Chr05 | + | View |
PT10G04210 | No description available. | Chr10 | - | View |
PT02G19060 | No description available. | Chr02 | + | View |
Ricinus communis
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
RC30076G01540 | No description available. | 30076 | + | View |
RC30128G03480 | No description available. | 30128 | - | View |
Solanum lycopersicum
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
SL01G079130 | Polygalacturonase (AHRD V1 ***- B6TPQ7_MAIZE)%3B contains Interpro domain(s) IPR012334 Pectin lyase fold | ch01 | + | View |
SL01G100980 | Polygalacturonase (AHRD V1 ***- B6TPQ7_MAIZE)%3B contains Interpro domain(s) IPR012334 Pectin lyase fold | ch01 | - | View |
Solanum tuberosum
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
ST01G038780 | Polygalacturonase (AHRD V1 ***- B6TPQ7_MAIZE); contains Interpro domain(s) IPR012334 Pectin lyase fold | chr01 | - | View |
ST06G007620 | Polygalacturonase (AHRD V1 ***- Q2M4X6_LILLO); contains Interpro domain(s) IPR000743 Glycoside hydrolase, family 28 | chr06 | + | View |
Theobroma cacao
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
TC0001G31910 | No description available. | scaffold_1 | - | View |
TC0005G32460 | No description available. | scaffold_5 | - | View |
Vitis vinifera
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
VV14G10090 | name=GSVIVG01031298001; | chr14 | + | View |