Anchorpoints

Gene id
GM10G28551
Organism
Glycine max

Paralogs (intra-species colinear regions)

Gene id Description Chromosome Strand Multiplicon
GM03G38140No description available.Gm03-View
GM19G41430No description available.Gm19+View
GM02G01230No description available.Gm02+View
GM19G40740No description available.Gm19-View


Orthologs (inter-species colinear regions)

Arabidopsis lyrata

Gene id Description Chromosome Strand Multiplicon
AL1G53260No description available.scaffold_1-View

Arabidopsis thaliana

Gene id Description Chromosome Strand Multiplicon
AT1G56710Pectin lyase-like superfamily protein Pectin lyase-like superfamily protein; FUNCTIONS IN: polygalacturonase activity; INVOLVED IN: carbohydrate metabolic process; LOCATED IN: endomembrane system; EXPRESSED IN: stem, embryo, leaf whorl, sepal, pedicel; EXPRESSED DURING: 4 anthesis, C globular stage; CONTAINS InterPro DOMAIN/s: Pectin lyase fold/virulence factor (InterPro:IPR011050), Pectin lyase fold (InterPro:IPR012334), Glycoside hydrolase, family 28 (InterPro:IPR000743), Parallel beta-helix repeat (InterPro:IPR006626); BEST Arabidopsis thaliana protein match is: Pectin lyase-like superfamily protein (TAIR:AT1G02460.1); Has 4176 Blast hits to 4154 proteins in 491 species: Archae - 6; Bacteria - 1245; Metazoa - 14; Fungi - 1278; Plants - 1491; Viruses - 0; Other Eukaryotes - 142 (source: NCBI BLink).1-View

Brassica rapa

Gene id Description Chromosome Strand Multiplicon
BR05G27270No description available.A05+View
BR09G15900No description available.A09+View

Beta vulgaris

Gene id Description Chromosome Strand Multiplicon
BV5G15600No description available.Bvchr5.sca025+View
BV4G08890No description available.Bvchr4.sca003+View

Citrullus lanatus

Gene id Description Chromosome Strand Multiplicon
CL10G09960No description available.Chr10-View
CL06G04050No description available.Chr6-View
CL09G04460No description available.Chr9+View

Cucumis melo

Gene id Description Chromosome Strand Multiplicon
CM00018G01420No description available.CM3.5_scaffold00018+View
CM00047G01170No description available.CM3.5_scaffold00047-View

Capsella rubella

Gene id Description Chromosome Strand Multiplicon
CRU_002G06810No description available.scaffold_2+View

Citrus sinensis

Gene id Description Chromosome Strand Multiplicon
CS00001G06080No description available.scaffold00001+View

Eucalyptus grandis

Gene id Description Chromosome Strand Multiplicon
EG0008G33120No description available.scaffold_8+View
EG0008G11290No description available.scaffold_8-View

Fragaria vesca

Gene id Description Chromosome Strand Multiplicon
FV6G03270Polygalacturonase At1g48100 (PG), Precursor (similar to)LG6-View

Gossypium raimondii

Gene id Description Chromosome Strand Multiplicon
GR05G06990No description available.Chr05+View
GR07G12000No description available.Chr07+View
GR08G13670No description available.Chr08+View
GR02G05690No description available.Chr02+View
GR13G20910No description available.Chr13-View

Lotus japonicus

Gene id Description Chromosome Strand Multiplicon
LJ1G070120No description available.chr1+View

Manihot esculenta

Gene id Description Chromosome Strand Multiplicon
ME07571G00800No description available.scaffold07571+View
ME00708G00050No description available.scaffold00708-View
ME10305G00620No description available.scaffold10305-View
ME00080G00240No description available.scaffold00080-View

Medicago truncatula

Gene id Description Chromosome Strand Multiplicon
MT7G110050polygalacturonase/glycoside hydrolase family proteinchr7-View

Oryza sativa ssp. japonica

Gene id Description Chromosome Strand Multiplicon
OS01G19170polygalacturonase, putative, expressed1+View

Prunus persica

Gene id Description Chromosome Strand Multiplicon
PPE_006G31280No description available.scaffold_6+View
PPE_001G10450No description available.scaffold_1-View

Populus trichocarpa

Gene id Description Chromosome Strand Multiplicon
PT08G10050No description available.Chr08-View
PT13G00500No description available.Chr13+View
PT05G00550No description available.Chr05+View
PT10G04210No description available.Chr10-View
PT02G19060No description available.Chr02+View

Ricinus communis

Gene id Description Chromosome Strand Multiplicon
RC30076G01540No description available.30076+View
RC30128G03480No description available.30128-View

Solanum lycopersicum

Gene id Description Chromosome Strand Multiplicon
SL01G079130Polygalacturonase (AHRD V1 ***- B6TPQ7_MAIZE)%3B contains Interpro domain(s) IPR012334 Pectin lyase foldch01+View
SL01G100980Polygalacturonase (AHRD V1 ***- B6TPQ7_MAIZE)%3B contains Interpro domain(s) IPR012334 Pectin lyase foldch01-View

Solanum tuberosum

Gene id Description Chromosome Strand Multiplicon
ST01G038780Polygalacturonase (AHRD V1 ***- B6TPQ7_MAIZE); contains Interpro domain(s) IPR012334 Pectin lyase foldchr01-View
ST06G007620Polygalacturonase (AHRD V1 ***- Q2M4X6_LILLO); contains Interpro domain(s) IPR000743 Glycoside hydrolase, family 28chr06+View

Theobroma cacao

Gene id Description Chromosome Strand Multiplicon
TC0001G31910No description available.scaffold_1-View
TC0005G32460No description available.scaffold_5-View

Vitis vinifera

Gene id Description Chromosome Strand Multiplicon
VV14G10090name=GSVIVG01031298001;chr14+View


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Gene id
Species
Description
Chromosome
Strand