Anchorpoints
- Gene id
- GM07G37460
- Organism
- Glycine max
Paralogs (intra-species colinear regions)
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
GM20G38160 | No description available. | Gm20 | - | View |
GM09G04720 | No description available. | Gm09 | + | View |
GM15G16141 | No description available. | Gm15 | - | View |
GM03G37391 | No description available. | Gm03 | - | View |
GM19G39990 | No description available. | Gm19 | - | View |
GM19G41950 | No description available. | Gm19 | + | View |
GM02G02000 | No description available. | Gm02 | - | View |
GM03G39360 | No description available. | Gm03 | + | View |
GM10G02140 | No description available. | Gm10 | - | View |
GM17G03170 | No description available. | Gm17 | - | View |
Orthologs (inter-species colinear regions)
Arabidopsis lyrata
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
AL3G07140 | No description available. | scaffold_3 | + | View |
AL7G27530 | No description available. | scaffold_7 | + | View |
AL8G12760 | No description available. | scaffold_8 | - | View |
AL4G35770 | No description available. | scaffold_4 | + | View |
AL1G02000 | No description available. | scaffold_1 | + | View |
Arabidopsis thaliana
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
AT3G06830 | Plant invertase/pectin methylesterase inhibitor superfamily; FUNCTIONS IN: enzyme inhibitor activity, pectinesterase activity; INVOLVED IN: cell wall modification; LOCATED IN: endomembrane system, cell wall, plant-type cell wall; EXPRESSED IN: 11 plant structures; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage, 4 anthesis, C globular stage, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Pectinesterase, active site (InterPro:IPR018040), Pectin lyase fold/virulence factor (InterPro:IPR011050), Pectinesterase, catalytic (InterPro:IPR000070), Pectinesterase inhibitor (InterPro:IPR006501), Pectin lyase fold (InterPro:IPR012334); BEST Arabidopsis thaliana protein match is: Plant invertase/pectin methylesterase inhibitor superfamily (TAIR:AT5G49180.1); Has 2944 Blast hits to 2876 proteins in 345 species: Archae - 8; Bacteria - 639; Metazoa - 1; Fungi - 198; Plants - 2026; Viruses - 0; Other Eukaryotes - 72 (source: NCBI BLink). Plant invertase/pectin methylesterase inhibitor superfamily | 3 | + | View |
AT5G49180 | Plant invertase/pectin methylesterase inhibitor superfamily; FUNCTIONS IN: enzyme inhibitor activity, pectinesterase activity; INVOLVED IN: cell wall modification; LOCATED IN: endomembrane system, cell wall, plant-type cell wall; EXPRESSED IN: 8 plant structures; EXPRESSED DURING: 4 anthesis, developing seed stage, C globular stage, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Pectinesterase, active site (InterPro:IPR018040), Pectin lyase fold/virulence factor (InterPro:IPR011050), Pectinesterase, catalytic (InterPro:IPR000070), Pectinesterase inhibitor (InterPro:IPR006501), Pectin lyase fold (InterPro:IPR012334); BEST Arabidopsis thaliana protein match is: Plant invertase/pectin methylesterase inhibitor superfamily (TAIR:AT3G06830.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). Encodes a putative pectin methylesterase. The gene is preferentially expressed in floral buds. Plant invertase/pectin methylesterase inhibitor superfamily | 5 | - | View |
AT3G05610 | Plant invertase/pectin methylesterase inhibitor superfamily; FUNCTIONS IN: enzyme inhibitor activity, pectinesterase activity; INVOLVED IN: cell wall modification; LOCATED IN: cell wall, plant-type cell wall; EXPRESSED IN: 11 plant structures; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage, 4 anthesis, C globular stage, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Pectin lyase fold/virulence factor (InterPro:IPR011050), Pectinesterase, catalytic (InterPro:IPR000070), Pectinesterase inhibitor (InterPro:IPR006501), Pectin lyase fold (InterPro:IPR012334); BEST Arabidopsis thaliana protein match is: Plant invertase/pectin methylesterase inhibitor superfamily (TAIR:AT5G27870.1); Has 12764 Blast hits to 3759 proteins in 499 species: Archae - 10; Bacteria - 1644; Metazoa - 570; Fungi - 815; Plants - 2126; Viruses - 67; Other Eukaryotes - 7532 (source: NCBI BLink). Plant invertase/pectin methylesterase inhibitor superfamily | 3 | - | View |
AT5G27870 | Plant invertase/pectin methylesterase inhibitor superfamily; FUNCTIONS IN: enzyme inhibitor activity, pectinesterase activity; INVOLVED IN: cell wall modification; LOCATED IN: cell wall, plant-type cell wall; EXPRESSED IN: 9 plant structures; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage, 4 anthesis, C globular stage, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Pectin lyase fold/virulence factor (InterPro:IPR011050), Pectinesterase, catalytic (InterPro:IPR000070), Pectinesterase inhibitor (InterPro:IPR006501), Pectin lyase fold (InterPro:IPR012334); BEST Arabidopsis thaliana protein match is: Plant invertase/pectin methylesterase inhibitor superfamily (TAIR:AT3G05610.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). Plant invertase/pectin methylesterase inhibitor superfamily | 5 | - | View |
AT1G02810 | Plant invertase/pectin methylesterase inhibitor superfamily Plant invertase/pectin methylesterase inhibitor superfamily; FUNCTIONS IN: enzyme inhibitor activity, pectinesterase activity; INVOLVED IN: cell wall modification; LOCATED IN: endomembrane system, cell wall, plant-type cell wall; EXPRESSED IN: 14 plant structures; EXPRESSED DURING: 6 growth stages; CONTAINS InterPro DOMAIN/s: Pectinesterase, active site (InterPro:IPR018040), Pectin lyase fold/virulence factor (InterPro:IPR011050), Pectinesterase, catalytic (InterPro:IPR000070), Pectinesterase inhibitor (InterPro:IPR006501), Pectin lyase fold (InterPro:IPR012334); BEST Arabidopsis thaliana protein match is: Plant invertase/pectin methylesterase inhibitor superfamily (TAIR:AT4G02330.1); Has 2709 Blast hits to 2654 proteins in 327 species: Archae - 6; Bacteria - 603; Metazoa - 3; Fungi - 204; Plants - 1867; Viruses - 0; Other Eukaryotes - 26 (source: NCBI BLink). | 1 | + | View |
AT4G15980 | Plant invertase/pectin methylesterase inhibitor superfamily; FUNCTIONS IN: enzyme inhibitor activity, pectinesterase activity; INVOLVED IN: cell wall modification; LOCATED IN: apoplast, plant-type cell wall; EXPRESSED IN: 12 plant structures; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage, 4 anthesis, C globular stage, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Pectinesterase, active site (InterPro:IPR018040), Pectin lyase fold/virulence factor (InterPro:IPR011050), Pectinesterase, catalytic (InterPro:IPR000070), Pectinesterase inhibitor (InterPro:IPR006501), Pectin lyase fold (InterPro:IPR012334); BEST Arabidopsis thaliana protein match is: Plant invertase/pectin methylesterase inhibitor superfamily (TAIR:AT5G49180.1); Has 11820 Blast hits to 6002 proteins in 917 species: Archae - 84; Bacteria - 4365; Metazoa - 2137; Fungi - 1021; Plants - 2480; Viruses - 33; Other Eukaryotes - 1700 (source: NCBI BLink). Plant invertase/pectin methylesterase inhibitor superfamily | 4 | - | View |
Brassica rapa
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
BR08G31940 | No description available. | A08 | - | View |
BR01G40020 | No description available. | A01 | - | View |
BR02G35250 | No description available. | A02 | - | View |
BR03G30650 | No description available. | A03 | + | View |
BR05G34290 | No description available. | A05 | - | View |
Beta vulgaris
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
BV4G09670 | No description available. | Bvchr4.sca002 | - | View |
Citrullus lanatus
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
CL05G07030 | No description available. | Chr5 | - | View |
CL06G04750 | No description available. | Chr6 | + | View |
Cucumis melo
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
CM00025G00680 | No description available. | CM3.5_scaffold00025 | + | View |
CM00047G01840 | No description available. | CM3.5_scaffold00047 | + | View |
CM00006G07890 | No description available. | CM3.5_scaffold00006 | - | View |
Carica papaya
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
CP00151G00190 | No description available. | supercontig_151 | - | View |
CP00050G01610 | No description available. | supercontig_50 | + | View |
Capsella rubella
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
CRU_001G01730 | No description available. | scaffold_1 | + | View |
CRU_003G04730 | No description available. | scaffold_3 | - | View |
CRU_003G06100 | No description available. | scaffold_3 | + | View |
CRU_008G08860 | No description available. | scaffold_8 | - | View |
CRU_007G24500 | No description available. | scaffold_7 | + | View |
Citrus sinensis
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
CS00001G07250 | No description available. | scaffold00001 | - | View |
Fragaria vesca
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
FV4G13820 | Pectinesterase 21 (PE 21) (probable) | LG4 | - | View |
FV6G02370 | Pectinesterase 22 (PE 22), Precursor (similar to) | LG6 | + | View |
FV2G28310 | Pectinesterase 41 (PE 41), Precursor (putative) | LG2 | - | View |
Gossypium raimondii
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
GR06G26060 | No description available. | Chr06 | + | View |
GR07G12700 | No description available. | Chr07 | - | View |
GR04G09140 | No description available. | Chr04 | + | View |
GR07G30200 | No description available. | Chr07 | - | View |
Lotus japonicus
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
LJ1G071790 | No description available. | chr1 | + | View |
Malus domestica
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
MD03G024710 | No description available. | 3 | - | View |
MD13G014990 | No description available. | 13 | + | View |
MD11G028170 | No description available. | 11 | + | View |
Manihot esculenta
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
ME04457G00510 | No description available. | scaffold04457 | - | View |
ME02264G01510 | No description available. | scaffold02264 | + | View |
ME01945G00630 | No description available. | scaffold01945 | + | View |
Medicago truncatula
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
MT2G436040 | pectinesterase/pectinesterase inhibitor | chr2 | + | View |
MT4G120280 | pectinesterase/pectinesterase inhibitor | chr4 | - | View |
Oryza sativa ssp. japonica
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
OS07G47830 | pectinesterase, putative, expressed | 7 | - | View |
Prunus persica
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
PPE_006G32370 | No description available. | scaffold_6 | + | View |
PPE_008G27590 | No description available. | scaffold_8 | - | View |
PPE_001G12390 | No description available. | scaffold_1 | + | View |
Populus trichocarpa
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
PT05G02270 | No description available. | Chr05 | + | View |
PT14G12700 | No description available. | Chr14 | + | View |
PT13G01320 | No description available. | Chr13 | + | View |
PT02G20250 | No description available. | Chr02 | - | View |
Ricinus communis
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
RC29986G00590 | No description available. | 29986 | - | View |
RC29726G01920 | No description available. | 29726 | - | View |
RC30128G02470 | No description available. | 30128 | - | View |
Solanum lycopersicum
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
SL06G009180 | Pectinesterase (AHRD V1 ***- B9I9P7_POPTR)%3B contains Interpro domain(s) IPR000070 Pectinesterase%2C catalytic | ch06 | - | View |
SL09G075330 | Pectinesterase (AHRD V1 ***- B9I9P7_POPTR)%3B contains Interpro domain(s) IPR000070 Pectinesterase%2C catalytic | ch09 | - | View |
SL01G099940 | Pectinesterase (AHRD V1 ***- B9RFE0_RICCO)%3B contains Interpro domain(s) IPR000070 Pectinesterase%2C catalytic | ch01 | - | View |
SL01G066360 | Pectinesterase (AHRD V1 ***- Q4G2Z0_TOBAC)%3B contains Interpro domain(s) IPR000070 Pectinesterase%2C catalytic | ch01 | + | View |
Solanum tuberosum
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
ST01G020470 | Pectinesterase (AHRD V1 ***- Q4G2Z0_TOBAC); contains Interpro domain(s) IPR000070 Pectinesterase, catalytic | chr01 | + | View |
ST01G037730 | Pectinesterase (AHRD V1 ***- B9RFE0_RICCO); contains Interpro domain(s) IPR000070 Pectinesterase, catalytic | chr01 | - | View |
ST09G022890 | Pectinesterase (AHRD V1 ***- B9I9P7_POPTR); contains Interpro domain(s) IPR000070 Pectinesterase, catalytic | chr09 | - | View |
ST02G005280 | Pectinesterase (AHRD V1 ***- B9RPW2_RICCO); contains Interpro domain(s) IPR000070 Pectinesterase, catalytic | chr02 | - | View |
ST05G026550 | Pectinesterase (AHRD V1 **** B9RWI7_RICCO); contains Interpro domain(s) IPR000070 Pectinesterase, catalytic | chr05 | + | View |
Theobroma cacao
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
TC0005G31320 | No description available. | scaffold_5 | - | View |
TC0004G29010 | No description available. | scaffold_4 | - | View |
TC0001G30200 | No description available. | scaffold_1 | - | View |
Thellungiella parvula
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
TP3G04490 | similar to AT3G05610|pectinesterase family protein | ch3-1 | - | View |
TP7G14480 | similar to AT4G15980|pectinesterase family protein | ch7-4 | - | View |
TP1G01780 | similar to AT1G02810|pectinesterase family protein | ch1-1 | + | View |
TP3G05790 | similar to AT3G06830|pectinesterase family protein | ch3-1 | + | View |
TP2G19530 | similar to AT5G49180|pectinesterase family protein | ch2-4 | - | View |
Vitis vinifera
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
VV07G08590 | name=GSVIVG01028040001; | chr7 | - | View |
Zea mays
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
ZM07G29980 | No description available. | 7 | - | View |
ZM01G12870 | No description available. | 1 | - | View |