Anchorpoints

Gene id
GM04G37780
Organism
Glycine max

Paralogs (intra-species colinear regions)

Gene id Description Chromosome Strand Multiplicon
GM08G28890No description available.Gm08+View
GM05G38550No description available.Gm05-View
GM08G01081No description available.Gm08+View
GM18G51810No description available.Gm18+View
GM06G17295No description available.Gm06+View


Orthologs (inter-species colinear regions)

Arabidopsis lyrata

Gene id Description Chromosome Strand Multiplicon
AL8G28240No description available.scaffold_8+View
AL6G13030No description available.scaffold_6-View

Arabidopsis thaliana

Gene id Description Chromosome Strand Multiplicon
AT5G61980ARF-GAP domain 1 A member of ARF GAP domain (AGD), A thaliana has 15 members, grouped into four classes. AGD1 belongs to the class 1, together with AGD2, AGD3 and AGD4. Not expressed in hypocotyls and cotyledons. ARF-GAP domain 1 (AGD1); FUNCTIONS IN: ARF GTPase activator activity, zinc ion binding; INVOLVED IN: cytoskeleton organization; LOCATED IN: endocytic vesicle; EXPRESSED IN: 18 plant structures; EXPRESSED DURING: 8 growth stages; CONTAINS InterPro DOMAIN/s: Arf GTPase activating protein (InterPro:IPR001164), Pleckstrin homology-type (InterPro:IPR011993), Ankyrin repeat-containing domain (InterPro:IPR020683), BAR (InterPro:IPR004148), Pleckstrin homology (InterPro:IPR001849), Ankyrin repeat (InterPro:IPR002110); BEST Arabidopsis thaliana protein match is: ARF GTPase-activating protein (TAIR:AT5G13300.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).5+View
AT5G13300ARF GTPase-activating protein SCARFACE (SFC); FUNCTIONS IN: ARF GTPase activator activity, phosphoinositide binding; INVOLVED IN: xylem and phloem pattern formation, response to auxin stimulus, phloem or xylem histogenesis, leaf morphogenesis; LOCATED IN: cytosol, trans-Golgi network transport vesicle, plasma membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Arf GTPase activating protein (InterPro:IPR001164), Pleckstrin homology-type (InterPro:IPR011993), Ankyrin repeat-containing domain (InterPro:IPR020683), BAR (InterPro:IPR004148), Pleckstrin homology (InterPro:IPR001849), Ankyrin repeat (InterPro:IPR002110); BEST Arabidopsis thaliana protein match is: ARF-GAP domain 1 (TAIR:AT5G61980.1); Has 64753 Blast hits to 27558 proteins in 1221 species: Archae - 110; Bacteria - 5131; Metazoa - 34265; Fungi - 4887; Plants - 2591; Viruses - 654; Other Eukaryotes - 17115 (source: NCBI BLink). Belongs to 15-member small GTPase gene family, ARF-GAP domain proteins (AGD); corresponds to AGD3, and is one of four proteins belonging to class 1, together with AGD1, AGD2 and AGD4. The protein contains four domains: BAR domain, PH domain, an ARF-GAP domain, and two Ankyrin repeats. In sfc mutants, the secondary and tertiary veins of cotyledons, leaves, sepals and petals are largely replaced by small segments of discontinuous veins. sfc mutants have exaggerated responses to auxin.5-View

Amborella trichopoda

Gene id Description Chromosome Strand Multiplicon
ATR_00016G01200No description available.scaffold00016+View

Brassica rapa

Gene id Description Chromosome Strand Multiplicon
BR02G38430No description available.A02+View
BR10G21040No description available.A10+View

Beta vulgaris

Gene id Description Chromosome Strand Multiplicon
BV5G14150No description available.Bvchr5.sca020-View
BV6G10550No description available.Bvchr6.sca027+View

Citrullus lanatus

Gene id Description Chromosome Strand Multiplicon
CL07G14130No description available.Chr7+View

Cucumis melo

Gene id Description Chromosome Strand Multiplicon
CM00031G02860No description available.CM3.5_scaffold00031-View

Carica papaya

Gene id Description Chromosome Strand Multiplicon
CP00013G01480No description available.supercontig_13-View

Capsella rubella

Gene id Description Chromosome Strand Multiplicon
CRU_008G22050No description available.scaffold_8+View
CRU_006G11160No description available.scaffold_6-View

Citrus sinensis

Gene id Description Chromosome Strand Multiplicon
CS00187G00160No description available.scaffold00187+View

Eucalyptus grandis

Gene id Description Chromosome Strand Multiplicon
EG0007G14760No description available.scaffold_7-View

Fragaria vesca

Gene id Description Chromosome Strand Multiplicon
FV0G13920ADP-ribosylation factor GTPase-activating protein AGD3 (ARF GAP AGD3) (putative)scf0513160-View
FV0G08990ADP-ribosylation factor GTPase-activating protein AGD1 (ARF GAP AGD1) (similar to)scf0513158+View

Gossypium raimondii

Gene id Description Chromosome Strand Multiplicon
GR05G19670No description available.Chr05-View
GR03G11650No description available.Chr03-View

Malus domestica

Gene id Description Chromosome Strand Multiplicon
MD04G005980No description available.4+View
MD13G010540No description available.13-View
MD14G014280No description available.14+View

Manihot esculenta

Gene id Description Chromosome Strand Multiplicon
ME02264G00180No description available.scaffold02264+View
ME01701G00690No description available.scaffold01701-View

Medicago truncatula

Gene id Description Chromosome Strand Multiplicon
MT3G098680ADP-ribosylation factor GTPase-activating protein AGD10chr3+View
MT8G100100ADP-ribosylation factor GTPase-activating protein AGD10chr8+View

Oryza sativa ssp. japonica

Gene id Description Chromosome Strand Multiplicon
OS08G42530SFC, putative, expressed8-View

Prunus persica

Gene id Description Chromosome Strand Multiplicon
PPE_001G22470No description available.scaffold_1+View
PPE_005G15020No description available.scaffold_5+View

Populus trichocarpa

Gene id Description Chromosome Strand Multiplicon
PT03G16320No description available.Chr03+View
PT15G10550No description available.Chr15-View

Ricinus communis

Gene id Description Chromosome Strand Multiplicon
RC30128G04500No description available.30128-View
RC30147G03210No description available.30147+View

Solanum lycopersicum

Gene id Description Chromosome Strand Multiplicon
SL03G118260Arf-GAP with GTPase%2C ANK repeat and PH domain-containing protein 3 (AHRD V1 *--- AGAP3_MOUSE)%3B contains Interpro domain(s) IPR001164 Arf GTPase activating proteinch03+View

Solanum tuberosum

Gene id Description Chromosome Strand Multiplicon
ST03G031700Arf-GAP with GTPase, ANK repeat and PH domain-containing protein 3 (AHRD V1 *--- AGAP3_HUMAN); contains Interpro domain(s) IPR001164 Arf GTPase activating proteinchr03+View
ST12G021000Arf-GAP with GTPase, ANK repeat and PH domain-containing protein 1 (AHRD V1 *--- AGAP1_XENLA); contains Interpro domain(s) IPR001164 Arf GTPase activating proteinchr12-View

Theobroma cacao

Gene id Description Chromosome Strand Multiplicon
TC0002G18830No description available.scaffold_2+View
TC0003G14120No description available.scaffold_3-View

Thellungiella parvula

Gene id Description Chromosome Strand Multiplicon
TP6G30690similar to AT5G13300|SFC (SCARFACE)ch6-6+View
TP2G25160similar to AT5G61980|AGD1 (ARF-GAP domain 1)ch2-4+View

Vitis vinifera

Gene id Description Chromosome Strand Multiplicon
VV17G08960name=GSVIVG01008640001;chr17+View
VV01G01110name=GSVIVG01001079001;chr1-View

Zea mays

Gene id Description Chromosome Strand Multiplicon
ZM01G34190No description available.1-View
ZM04G10130No description available.4-View


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Gene id
Species
Description
Chromosome
Strand