Anchorpoints
- Gene id
- GM04G31847
- Organism
- Glycine max
Paralogs (intra-species colinear regions)
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
GM02G13401 | No description available. | Gm02 | + | View |
GM08G27670 | No description available. | Gm08 | + | View |
GM17G08861 | No description available. | Gm17 | + | View |
GM18G50900 | No description available. | Gm18 | + | View |
GM03G02191 | No description available. | Gm03 | + | View |
GM06G22650 | No description available. | Gm06 | + | View |
GM05G07286 | No description available. | Gm05 | + | View |
GM19G04320 | No description available. | Gm19 | + | View |
Orthologs (inter-species colinear regions)
Arabidopsis lyrata
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
AL2G17400 | No description available. | scaffold_2 | - | View |
AL6G15630 | No description available. | scaffold_6 | - | View |
AL8G27080 | No description available. | scaffold_8 | - | View |
Arabidopsis thaliana
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
AT3G30260 | AGAMOUS-like 79 (AGL79); FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription, DNA-dependent; LOCATED IN: nucleus; EXPRESSED IN: root; CONTAINS InterPro DOMAIN/s: Transcription factor, MADS-box (InterPro:IPR002100), Transcription factor, K-box (InterPro:IPR002487); BEST Arabidopsis thaliana protein match is: K-box region and MADS-box transcription factor family protein (TAIR:AT1G26310.1); Has 7337 Blast hits to 7335 proteins in 920 species: Archae - 0; Bacteria - 2; Metazoa - 637; Fungi - 301; Plants - 6322; Viruses - 0; Other Eukaryotes - 75 (source: NCBI BLink). AGAMOUS-like 79 | 3 | + | View |
AT5G60910 | AGAMOUS-like 8 AGAMOUS-like 8 (AGL8); FUNCTIONS IN: sequence-specific DNA binding transcription factor activity; INVOLVED IN: positive regulation of flower development, maintenance of inflorescence meristem identity, fruit development; LOCATED IN: nucleus; EXPRESSED IN: 19 plant structures; EXPRESSED DURING: 8 growth stages; CONTAINS InterPro DOMAIN/s: Transcription factor, MADS-box (InterPro:IPR002100), Transcription factor, K-box (InterPro:IPR002487); BEST Arabidopsis thaliana protein match is: K-box region and MADS-box transcription factor family protein (TAIR:AT1G69120.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). MADS box gene negatively regulated by APETALA1 | 5 | - | View |
AT3G02310 | MADS-box protein, binds K domain of AG in vivo K-box region and MADS-box transcription factor family protein SEPALLATA 2 (SEP2); FUNCTIONS IN: protein binding, DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: flower development, ovule development; LOCATED IN: nucleus; EXPRESSED IN: 12 plant structures; EXPRESSED DURING: 7 growth stages; CONTAINS InterPro DOMAIN/s: Transcription factor, MADS-box (InterPro:IPR002100), Transcription factor, K-box (InterPro:IPR002487); BEST Arabidopsis thaliana protein match is: K-box region and MADS-box transcription factor family protein (TAIR:AT5G15800.1); Has 7363 Blast hits to 7362 proteins in 916 species: Archae - 3; Bacteria - 0; Metazoa - 630; Fungi - 305; Plants - 6350; Viruses - 0; Other Eukaryotes - 75 (source: NCBI BLink). | 3 | - | View |
AT5G15800 | SEPALLATA1 (SEP1); FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: flower development, ovule development; LOCATED IN: nucleus; EXPRESSED IN: 12 plant structures; EXPRESSED DURING: 6 growth stages; CONTAINS InterPro DOMAIN/s: Transcription factor, MADS-box (InterPro:IPR002100), Transcription factor, K-box (InterPro:IPR002487); BEST Arabidopsis thaliana protein match is: K-box region and MADS-box transcription factor family protein (TAIR:AT3G02310.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). K-box region and MADS-box transcription factor family protein Encodes a MADS box transcription factor involved flower and ovule development. Functionally redundant with SEP2 and SEP3. | 5 | - | View |
AT1G69120 | K-box region and MADS-box transcription factor family protein APETALA1 (AP1); CONTAINS InterPro DOMAIN/s: Transcription factor, MADS-box (InterPro:IPR002100), Transcription factor, K-box (InterPro:IPR002487); BEST Arabidopsis thaliana protein match is: K-box region and MADS-box transcription factor family protein (TAIR:AT1G26310.1); Has 8031 Blast hits to 8015 proteins in 981 species: Archae - 10; Bacteria - 56; Metazoa - 785; Fungi - 329; Plants - 6623; Viruses - 2; Other Eukaryotes - 226 (source: NCBI BLink). Floral homeotic gene encoding a MADS domain protein homologous to SRF transcription factors. Specifies floral meristem and sepal identity. Required for the transcriptional activation of AGAMOUS. Interacts with LEAFY.Binds to promoter and regulates the expression of flowering time genes SVP, SOC1 and AGL24. | 1 | - | View |
Brassica rapa
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
BR09G05400 | No description available. | A09 | - | View |
BR02G37730 | No description available. | A02 | - | View |
BR02G19640 | No description available. | A02 | - | View |
BR06G31530 | No description available. | A06 | - | View |
Citrullus lanatus
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
CL04G11410 | No description available. | Chr4 | - | View |
Cucumis melo
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
CM00001G01390 | No description available. | CM3.5_scaffold00001 | + | View |
Carica papaya
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
CP00001G01580 | No description available. | supercontig_1 | + | View |
CP00014G02250 | No description available. | supercontig_14 | + | View |
Capsella rubella
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
CRU_003G01340 | No description available. | scaffold_3 | - | View |
CRU_005G07940 | No description available. | scaffold_5 | + | View |
CRU_002G14770 | No description available. | scaffold_2 | - | View |
CRU_008G20980 | No description available. | scaffold_8 | - | View |
Citrus sinensis
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
CS00019G01770 | No description available. | scaffold00019 | - | View |
CS00030G00760 | No description available. | scaffold00030 | - | View |
Eucalyptus grandis
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
EG0011G21260 | No description available. | scaffold_11 | + | View |
EG0002G05450 | No description available. | scaffold_2 | + | View |
Fragaria vesca
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
FV6G42060 | Agamous-like MADS-box protein AGL8 homolog (putative) | LG6 | - | View |
FV0G03660 | Floral homeotic protein APETALA 1 (putative) | scf0513158 | - | View |
FV5G11740 | Agamous-like MADS-box protein AGL8 homolog (putative) | LG5 | - | View |
Gossypium raimondii
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
GR03G10300 | No description available. | Chr03 | + | View |
GR01G20730 | No description available. | Chr01 | - | View |
GR06G26840 | No description available. | Chr06 | + | View |
Lotus japonicus
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
LJ4G030390 | No description available. | chr4 | + | View |
LJ1G039100 | No description available. | chr1 | + | View |
Malus domestica
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
MD09G005140 | No description available. | 9 | + | View |
MD13G003850 | No description available. | 13 | - | View |
MD06G016940 | No description available. | 6 | - | View |
MD14G020330 | No description available. | 14 | + | View |
MD17G005530 | No description available. | 17 | + | View |
Manihot esculenta
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
ME04043G01720 | No description available. | scaffold04043 | - | View |
ME06656G00870 | No description available. | scaffold06656 | - | View |
ME08359G01370 | No description available. | scaffold08359 | - | View |
Medicago truncatula
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
MT4G109810 | MADS-box transcription factor | chr4 | + | View |
MT2G461710 | MADS-box transcription factor family protein | chr2 | + | View |
MT7G016600 | MADS-box transcription factor | chr7 | + | View |
MT6G015975 | MADS-box transcription factor | chr6 | + | View |
Oryza sativa ssp. japonica
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
OS07G41370 | MADS-box transcription factor 18 OsMADS18 - MADS-box family gene with MIKCc type-box, expressed | 7 | + | View |
Prunus persica
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
PPE_001G30210 | No description available. | scaffold_1 | + | View |
PPE_005G21190 | No description available. | scaffold_5 | + | View |
PPE_003G22850 | No description available. | scaffold_3 | - | View |
Populus trichocarpa
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
PT17G09970 | No description available. | Chr17 | + | View |
PT10G15410 | No description available. | Chr10 | - | View |
PT08G09840 | No description available. | Chr08 | + | View |
PT04G11540 | No description available. | Chr04 | - | View |
Ricinus communis
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
RC30138G01100 | No description available. | 30138 | - | View |
RC30174G04740 | No description available. | 30174 | - | View |
Solanum lycopersicum
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
SL05G056620 | Myocyte-specific enhancer factor 2D (AHRD V1 *-*- MEF2D_HUMAN)%3B contains Interpro domain(s) IPR002100 Transcription factor%2C MADS-box IPR002487 Transcription factor%2C K-box | ch05 | - | View |
SL02G065730 | MADS box transcription factor (AHRD V1 ***- Q689E7_GENTR)%3B contains Interpro domain(s) IPR002100 Transcription factor%2C MADS-box | ch02 | - | View |
SL03G114830 | MADS box transcription factor (AHRD V1 ***- Q9SBQ1_PETHY)%3B contains Interpro domain(s) IPR002487 Transcription factor%2C K-box | ch03 | - | View |
SL02G089200 | MADS-box transcription factor (AHRD V1 **** Q3KSZ0_PRUDU)%3B contains Interpro domain(s) IPR002100 Transcription factor%2C MADS-box IPR002487 Transcription factor%2C K-box | ch02 | + | View |
Solanum tuberosum
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
ST02G012590 | MADS box transcription factor (AHRD V1 ***- Q689E7_GENTR); contains Interpro domain(s) IPR002487 Transcription factor, K-box | chr02 | - | View |
ST03G028370 | MADS box transcription factor (AHRD V1 ***- Q9SBQ1_PETHY); contains Interpro domain(s) IPR002487 Transcription factor, K-box | chr03 | - | View |
ST05G006010 | MADS-box transcription factor MADS-MC (AHRD V1 *-** Q8S4L5_SOLLC); contains Interpro domain(s) IPR002487 Transcription factor, K-box | chr05 | + | View |
ST02G033670 | MADS box transcription factor (AHRD V1 ***- Q689E7_GENTR); contains Interpro domain(s) IPR002100 Transcription factor, MADS-box | chr02 | - | View |
Theobroma cacao
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
TC0002G32510 | No description available. | scaffold_2 | - | View |
TC0003G10960 | No description available. | scaffold_3 | + | View |
TC0004G11010 | No description available. | scaffold_4 | + | View |
Thellungiella parvula
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
TP5G24190 | similar to AT1G69120|AP1 (APETALA1) | ch5-6 | - | View |
TP3G01370 | similar to AT3G02310|SEP2 (SEPALLATA 2) | ch3-1 | - | View |
TP2G24220 | similar to AT5G60910|AGL8 (agamous-like 8) | ch2-4 | - | View |
TP2G18120 | similar to AT3G30260|AGL79 (AGAMOUS-LIKE 79) | ch2-4 | + | View |
Vitis vinifera
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
VV01G10760 | name=GSVIVG01012250001; | chr1 | - | View |
VV17G04850 | name=GSVIVG01008140001; | chr17 | - | View |
VV14G16100 | name=GSVIVG01036549001; | chr14 | - | View |
Zea mays
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
ZM07G26720 | LOC542045 | 7 | - | View |