Anchorpoints

Gene id
CS00061G00540
Organism
Citrus sinensis

Paralogs (intra-species colinear regions)

No paralogous anchorpoints available


Orthologs (inter-species colinear regions)

Arabidopsis lyrata

Gene id Description Chromosome Strand Multiplicon
AL4G11860No description available.scaffold_4-View

Arabidopsis thaliana

Gene id Description Chromosome Strand Multiplicon
AT2G28200C2H2-type zinc finger family protein C2H2-type zinc finger family protein; FUNCTIONS IN: sequence-specific DNA binding transcription factor activity, zinc ion binding, nucleic acid binding; INVOLVED IN: regulation of transcription; LOCATED IN: intracellular; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 11 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, C2H2-like (InterPro:IPR015880), Zinc finger, C2H2-type (InterPro:IPR007087); BEST Arabidopsis thaliana protein match is: C2H2-type zinc finger family protein (TAIR:AT5G04390.1); Has 1824 Blast hits to 1700 proteins in 108 species: Archae - 0; Bacteria - 0; Metazoa - 861; Fungi - 12; Plants - 927; Viruses - 0; Other Eukaryotes - 24 (source: NCBI BLink).2+View

Brassica rapa

Gene id Description Chromosome Strand Multiplicon
BR07G12980No description available.A07+View

Beta vulgaris

Gene id Description Chromosome Strand Multiplicon
BV9G06880No description available.Bvchr9.sca007+View

Citrullus lanatus

Gene id Description Chromosome Strand Multiplicon
CL02G21720No description available.Chr2+View
CL10G17950No description available.Chr10-View

Cucumis melo

Gene id Description Chromosome Strand Multiplicon
CM00011G03080No description available.CM3.5_scaffold00011+View

Carica papaya

Gene id Description Chromosome Strand Multiplicon
CP00001G00030No description available.supercontig_1-View
CP00053G01610No description available.supercontig_53+View

Capsella rubella

Gene id Description Chromosome Strand Multiplicon
CRU_004G08820No description available.scaffold_4+View
CRU_008G19920No description available.scaffold_8+View

Eucalyptus grandis

Gene id Description Chromosome Strand Multiplicon
EG0007G21570No description available.scaffold_7-View
EG0001G13350No description available.scaffold_1-View
EG0002G33060No description available.scaffold_2-View

Fragaria vesca

Gene id Description Chromosome Strand Multiplicon
FV3G28520Zinc finger protein 1 (probable)LG3+View

Glycine max

Gene id Description Chromosome Strand Multiplicon
GM03G34320No description available.Gm03+View
GM12G30270No description available.Gm12+View
GM11G19830No description available.Gm11-View
GM13G20950No description available.Gm13+View
GM13G39620No description available.Gm13-View
GM12G08660No description available.Gm12+View

Gossypium raimondii

Gene id Description Chromosome Strand Multiplicon
GR01G11710No description available.Chr01+View
GR09G41290No description available.Chr09-View
GR06G16120No description available.Chr06-View
GR06G10480No description available.Chr06-View
GR09G09020No description available.Chr09-View

Lotus japonicus

Gene id Description Chromosome Strand Multiplicon
LJ3G017340No description available.chr3+View

Malus domestica

Gene id Description Chromosome Strand Multiplicon
MD11G012470No description available.11-View
MD12G010080No description available.12-View

Manihot esculenta

Gene id Description Chromosome Strand Multiplicon
ME06206G00030No description available.scaffold06206+View
ME08316G00580No description available.scaffold08316+View
ME11069G00530No description available.scaffold11069+View

Medicago truncatula

Gene id Description Chromosome Strand Multiplicon
MT1G062780C2H2-type zinc finger proteinchr1-View
MT4G057230C2H2-type zinc finger protein C putativechr4-View
MT2G084315C2H2-type zinc finger proteinchr2+View

Prunus persica

Gene id Description Chromosome Strand Multiplicon
PPE_007G14800No description available.scaffold_7-View
PPE_006G11090No description available.scaffold_6+View
PPE_002G19890No description available.scaffold_2-View

Populus trichocarpa

Gene id Description Chromosome Strand Multiplicon
PT04G21690No description available.Chr04+View
PT10G22940No description available.Chr10+View
PT06G12160No description available.Chr06-View
PT16G09810No description available.Chr16-View
PT08G03230No description available.Chr08-View
PT09G00480No description available.Chr09-View

Ricinus communis

Gene id Description Chromosome Strand Multiplicon
RC29589G00440No description available.29589+View

Solanum lycopersicum

Gene id Description Chromosome Strand Multiplicon
SL11G066400Cys2/His2 zinc-finger transcription factor (AHRD V1 **** Q4U318_SILLA)%3B contains Interpro domain(s) IPR007087 Zinc finger%2C C2H2-typech11+View
SL06G074800Cys2/His2 zinc-finger transcription factor (AHRD V1 **** Q4U318_SILLA)%3B contains Interpro domain(s) IPR007087 Zinc finger%2C C2H2-typech06-View
SL09G008440Zinc finger family protein (AHRD V1 ***- D7LWQ5_ARALY)%3B contains Interpro domain(s) IPR007087 Zinc finger%2C C2H2-typech09+View

Solanum tuberosum

Gene id Description Chromosome Strand Multiplicon
ST11G024230Cys2/His2 zinc-finger transcription factor (AHRD V1 **** Q4U318_SILLA); contains Interpro domain(s) IPR007087 Zinc finger, C2H2-typechr11+View
ST06G030860Cys2/His2 zinc-finger transcription factor (AHRD V1 **** Q4U318_SILLA); contains Interpro domain(s) IPR007087 Zinc finger, C2H2-typechr06+View
ST10G025320Zinc-finger protein (AHRD V1 ***- Q40899_PETHY); contains Interpro domain(s) IPR007087 Zinc finger, C2H2-typechr10+View

Theobroma cacao

Gene id Description Chromosome Strand Multiplicon
TC0010G08380No description available.scaffold_10r+View
TC0009G29350No description available.scaffold_9-View
TC0005G06810No description available.scaffold_5+View

Thellungiella parvula

Gene id Description Chromosome Strand Multiplicon
TP4G11010similar to AT2G28200|nucleic acid binding / transcription factor/ zinc ion bindingch4-6+View

Vitis vinifera

Gene id Description Chromosome Strand Multiplicon
VV08G10660name=GSVIVG01033678001;chr8-View
VV06G08790name=GSVIVG01031461001;chr6+View


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Gene id
Species
Description
Chromosome
Strand