Anchorpoints

Gene id
CRU_006G08110
Organism
Capsella rubella

Paralogs (intra-species colinear regions)

Gene id Description Chromosome Strand Multiplicon
CRU_008G24800No description available.scaffold_8+View


Orthologs (inter-species colinear regions)

Arabidopsis lyrata

Gene id Description Chromosome Strand Multiplicon
AL6G09530No description available.scaffold_6+View
AL8G31490No description available.scaffold_8+View

Arabidopsis thaliana

Gene id Description Chromosome Strand Multiplicon
AT5G64740cellulose synthase 6 (CESA6); FUNCTIONS IN: cellulose synthase activity, transferase activity, transferring glycosyl groups; INVOLVED IN: in 6 processes; LOCATED IN: cortical microtubule, transverse to long axis, Golgi apparatus, cellulose synthase complex, plasma membrane, membrane; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Cellulose synthase (InterPro:IPR005150), Zinc finger, RING-type (InterPro:IPR001841); BEST Arabidopsis thaliana protein match is: cellulose synthase 5 (TAIR:AT5G09870.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). Encodes a cellulose synthase isomer. CESA6 mutants have cellulose defect in the primary cell wall. Multiple lines of evidence suggest that CESA6, along with CESA1 and CESA3 are present in the same plasma membrane complex for cellulose biosynthesis. CESA2 and CESA5 are related to CESA6, having partially redundant roles. As inferred from the null role of secondary wall-type CesAs, included in a set of five primary wall-type CesAs that may support trichome cell wall thickening. cellulose synthase 65+View
AT4G39350Encodes a cellulose synthase isomer, related to CESA6. As inferred from the null role of secondary wall-type CesAs, included in a set of five primary wall-type CesAs that may support trichome cell wall thickening. cellulose synthase A2 cellulose synthase A2 (CESA2); FUNCTIONS IN: cellulose synthase activity, transferase activity, transferring glycosyl groups; INVOLVED IN: primary cell wall biogenesis, cellulose biosynthetic process; LOCATED IN: plasma membrane; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Cellulose synthase (InterPro:IPR005150), Zinc finger, RING-type (InterPro:IPR001841); BEST Arabidopsis thaliana protein match is: cellulose synthase A9 (TAIR:AT2G21770.1); Has 3166 Blast hits to 2799 proteins in 618 species: Archae - 10; Bacteria - 1096; Metazoa - 3; Fungi - 18; Plants - 1940; Viruses - 5; Other Eukaryotes - 94 (source: NCBI BLink).4+View
AT5G09870cellulose synthase 5 (CESA5); FUNCTIONS IN: cellulose synthase activity, transferase activity, transferring glycosyl groups; INVOLVED IN: response to cyclopentenone, plant-type cell wall biogenesis; LOCATED IN: plasma membrane; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Cellulose synthase (InterPro:IPR005150), Zinc finger, RING-type (InterPro:IPR001841); BEST Arabidopsis thaliana protein match is: cellulose synthase 6 (TAIR:AT5G64740.1); Has 3218 Blast hits to 2905 proteins in 647 species: Archae - 9; Bacteria - 1207; Metazoa - 1; Fungi - 23; Plants - 1882; Viruses - 5; Other Eukaryotes - 91 (source: NCBI BLink). cellulose synthase 5 Encodes a cellulose synthase CESA5 that produces seed mucilage cellulose.5+View

Brassica rapa

Gene id Description Chromosome Strand Multiplicon
BR02G40680No description available.A02+View
BR06G22700No description available.A06+View
BR03G03760No description available.A03+View
BR09G07000No description available.A09+View

Citrullus lanatus

Gene id Description Chromosome Strand Multiplicon
CL01G08230No description available.Chr1-View

Cucumis melo

Gene id Description Chromosome Strand Multiplicon
CM00007G10610No description available.CM3.5_scaffold00007-View

Glycine max

Gene id Description Chromosome Strand Multiplicon
GM05G32100No description available.Gm05-View
GM08G15380No description available.Gm08-View

Gossypium raimondii

Gene id Description Chromosome Strand Multiplicon
GR03G04930No description available.Chr03-View
GR02G15030No description available.Chr02-View
GR08G10010No description available.Chr08-View

Prunus persica

Gene id Description Chromosome Strand Multiplicon
PPE_004G33240No description available.scaffold_4+View

Solanum lycopersicum

Gene id Description Chromosome Strand Multiplicon
SL11G005560Cellulose synthase (AHRD V1 ***- B9GTH4_POPTR)%3B contains Interpro domain(s) IPR005150 Cellulose synthasech11+View

Solanum tuberosum

Gene id Description Chromosome Strand Multiplicon
ST12G024880Cellulose synthase (AHRD V1 **** B9GTH4_POPTR); contains Interpro domain(s) IPR005150 Cellulose synthasechr12+View
ST02G018800Cellulose synthase (AHRD V1 **** Q6J8W9_9ROSI); contains Interpro domain(s) IPR005150 Cellulose synthasechr02+View

Theobroma cacao

Gene id Description Chromosome Strand Multiplicon
TC0001G11380No description available.scaffold_1-View

Thellungiella parvula

Gene id Description Chromosome Strand Multiplicon
TP6G33540similar to AT5G09870|CESA5 (CELLULOSE SYNTHASE 5)ch6-6-View
TP2G27810similar to AT5G64740|CESA6 (CELLULOSE SYNTHASE 6)ch2-4+View

Vitis vinifera

Gene id Description Chromosome Strand Multiplicon
VV04G05530name=GSVIVG01026557001;chr4+View


Download

Gene id
Species
Description
Chromosome
Strand