Anchorpoints

Gene id
CRU_004G29170
Organism
Capsella rubella

Paralogs (intra-species colinear regions)

Gene id Description Chromosome Strand Multiplicon
CRU_005G27910No description available.scaffold_5-View


Orthologs (inter-species colinear regions)

Arabidopsis lyrata

Gene id Description Chromosome Strand Multiplicon
AL4G35780No description available.scaffold_4-View
AL5G33760No description available.scaffold_5-View

Arabidopsis thaliana

Gene id Description Chromosome Strand Multiplicon
AT2G47560RING/U-box superfamily protein; FUNCTIONS IN: zinc ion binding; EXPRESSED IN: root, pedicel; EXPRESSED DURING: 4 anthesis; CONTAINS InterPro DOMAIN/s: Zinc finger, RING-type (InterPro:IPR001841), Zinc finger, C3HC4 RING-type (InterPro:IPR018957); BEST Arabidopsis thaliana protein match is: AtL5 (TAIR:AT3G62690.1); Has 10475 Blast hits to 10453 proteins in 314 species: Archae - 0; Bacteria - 0; Metazoa - 2615; Fungi - 944; Plants - 5266; Viruses - 125; Other Eukaryotes - 1525 (source: NCBI BLink). RING/U-box superfamily protein2-View
AT3G62690Encodes a RING-H2 zinc finger protein related to ATL2. The ATL gene family is represented by fifteen sequences that contain, in addition to the RING, a transmembrane domain which is located in most of them towards the N-terminal end. AtL5 AtL5 (ATL5); FUNCTIONS IN: zinc ion binding; INVOLVED IN: protein complex assembly; LOCATED IN: membrane; EXPRESSED IN: 6 plant structures; EXPRESSED DURING: F mature embryo stage, petal differentiation and expansion stage, E expanded cotyledon stage, D bilateral stage; CONTAINS InterPro DOMAIN/s: Zinc finger, RING-type (InterPro:IPR001841), Zinc finger, C3HC4 RING-type (InterPro:IPR018957); BEST Arabidopsis thaliana protein match is: RING/U-box superfamily protein (TAIR:AT2G47560.1); Has 10661 Blast hits to 10636 proteins in 314 species: Archae - 0; Bacteria - 0; Metazoa - 2642; Fungi - 1094; Plants - 5229; Viruses - 125; Other Eukaryotes - 1571 (source: NCBI BLink).3-View

Brassica rapa

Gene id Description Chromosome Strand Multiplicon
BR07G17480No description available.A07-View
BR05G00380No description available.A05+View
BR09G41600No description available.A09-View

Citrullus lanatus

Gene id Description Chromosome Strand Multiplicon
CL05G07020No description available.Chr5+View

Carica papaya

Gene id Description Chromosome Strand Multiplicon
CP00151G00170No description available.supercontig_151+View

Citrus sinensis

Gene id Description Chromosome Strand Multiplicon
CS00001G07330No description available.scaffold00001-View

Eucalyptus grandis

Gene id Description Chromosome Strand Multiplicon
EG0011G29700No description available.scaffold_11+View

Fragaria vesca

Gene id Description Chromosome Strand Multiplicon
FV2G28290RING-H2 finger protein ATL3L (probable)LG2+View

Glycine max

Gene id Description Chromosome Strand Multiplicon
GM03G37360No description available.Gm03+View
GM02G02040No description available.Gm02-View
GM17G03155No description available.Gm17+View
GM19G39960No description available.Gm19+View

Gossypium raimondii

Gene id Description Chromosome Strand Multiplicon
GR07G12720No description available.Chr07-View
GR04G09160No description available.Chr04+View

Lotus japonicus

Gene id Description Chromosome Strand Multiplicon
LJ1G071180No description available.chr1-View

Manihot esculenta

Gene id Description Chromosome Strand Multiplicon
ME01945G00650No description available.scaffold01945-View
ME04457G00530No description available.scaffold04457-View

Medicago truncatula

Gene id Description Chromosome Strand Multiplicon
MT7G108855anaphase-promoting complex subunit 11 RING-H2 finger proteinchr7+View
MT4G120270RING-H2 zinc finger proteinchr4+View

Oryza sativa ssp. japonica

Gene id Description Chromosome Strand Multiplicon
OS05G29676RING-H2 finger protein, putative, expressed5+View

Prunus persica

Gene id Description Chromosome Strand Multiplicon
PPE_008G27570No description available.scaffold_8+View

Ricinus communis

Gene id Description Chromosome Strand Multiplicon
RC29986G00570No description available.29986+View

Solanum lycopersicum

Gene id Description Chromosome Strand Multiplicon
SL09G075320Ring H2 finger protein (AHRD V1 *-*- D9ZHD8_HYPPE)%3B contains Interpro domain(s) IPR001841 Zinc finger%2C RING-typech09+View

Solanum tuberosum

Gene id Description Chromosome Strand Multiplicon
ST09G022880Ring H2 finger protein (AHRD V1 *-*- D9ZHD8_HYPPE); contains Interpro domain(s) IPR001841 Zinc finger, RING-typechr09+View
ST01G037900RING finger protein (AHRD V1 *-*- A4D9A7_ASPFU); contains Interpro domain(s) IPR001841 Zinc finger, RING-typechr01-View

Theobroma cacao

Gene id Description Chromosome Strand Multiplicon
TC0001G30170No description available.scaffold_1+View
TC0004G28990No description available.scaffold_4+View

Thellungiella parvula

Gene id Description Chromosome Strand Multiplicon
TP5G00830similar to AT3G62690|ATL5 (ATL5)ch5-1+View
TP4G29500similar to AT2G47560|zinc finger (C3HC4-type RING finger) family proteinch4-6-View

Vitis vinifera

Gene id Description Chromosome Strand Multiplicon
VV07G08580name=GSVIVG01028038001;chr7+View

Zea mays

Gene id Description Chromosome Strand Multiplicon
ZM06G22240No description available.6+View


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Gene id
Species
Description
Chromosome
Strand