Anchorpoints

Gene id
CRU_002G18640
Organism
Capsella rubella

Paralogs (intra-species colinear regions)

Gene id Description Chromosome Strand Multiplicon
CRU_008G16890No description available.scaffold_8+View


Orthologs (inter-species colinear regions)

Arabidopsis lyrata

Gene id Description Chromosome Strand Multiplicon
AL2G21810No description available.scaffold_2-View
AL8G22480No description available.scaffold_8+View

Arabidopsis thaliana

Gene id Description Chromosome Strand Multiplicon
AT1G72990beta-galactosidase 17 (BGAL17); FUNCTIONS IN: cation binding, beta-galactosidase activity, hydrolase activity, hydrolyzing O-glycosyl compounds, catalytic activity; INVOLVED IN: lactose catabolic process, using glucoside 3-dehydrogenase, carbohydrate metabolic process, lactose catabolic process via UDP-galactose, lactose catabolic process; LOCATED IN: mitochondrion; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: Glycoside hydrolase, family 35, conserved site (InterPro:IPR019801), Glycoside hydrolase, family 35 (InterPro:IPR001944), Glycoside hydrolase, catalytic core (InterPro:IPR017853), Glycoside hydrolase, subgroup, catalytic core (InterPro:IPR013781); BEST Arabidopsis thaliana protein match is: beta-galactosidase 3 (TAIR:AT4G36360.2); Has 2090 Blast hits to 2034 proteins in 466 species: Archae - 15; Bacteria - 876; Metazoa - 411; Fungi - 209; Plants - 521; Viruses - 0; Other Eukaryotes - 58 (source: NCBI BLink). beta-galactosidase 171-View

Brassica rapa

Gene id Description Chromosome Strand Multiplicon
BR07G21020No description available.A07+View

Beta vulgaris

Gene id Description Chromosome Strand Multiplicon
BV7G03480No description available.Bvchr7.sca021+View

Citrullus lanatus

Gene id Description Chromosome Strand Multiplicon
CL07G12450No description available.Chr7+View

Citrus sinensis

Gene id Description Chromosome Strand Multiplicon
CS00032G01100No description available.scaffold00032-View

Eucalyptus grandis

Gene id Description Chromosome Strand Multiplicon
EG0003G28280No description available.scaffold_3+View
EG0006G26370No description available.scaffold_6+View
EG0003G07390No description available.scaffold_3-View
EG0010G24370No description available.scaffold_10+View

Fragaria vesca

Gene id Description Chromosome Strand Multiplicon
FV4G20440Beta-galactosidase 17 (Lactase 17), Precursor (similar to)LG4+View

Glycine max

Gene id Description Chromosome Strand Multiplicon
GM15G02750No description available.Gm15+View
GM13G42560No description available.Gm13+View
GM08G20650No description available.Gm08-View
GM07G01250No description available.Gm07-View

Gossypium raimondii

Gene id Description Chromosome Strand Multiplicon
GR01G01160No description available.Chr01+View
GR11G06530No description available.Chr11-View
GR10G08290No description available.Chr10+View

Manihot esculenta

Gene id Description Chromosome Strand Multiplicon
ME12525G00650No description available.scaffold12525+View

Medicago truncatula

Gene id Description Chromosome Strand Multiplicon
MT2G100000beta-like galactosidasechr2+View
MT5G024080beta-galactosidase-like proteinchr5+View

Populus trichocarpa

Gene id Description Chromosome Strand Multiplicon
PT03G03700No description available.Chr03+View
PT06G14450No description available.Chr06+View
PT01G20040No description available.Chr01+View

Solanum lycopersicum

Gene id Description Chromosome Strand Multiplicon
SL12G044880Beta-galactosidase Beta-galactosidase (AHRD V1 ***- Q546T5_SOLLC)%3B contains Interpro domain(s) IPR001944 Glycoside hydrolase%2C family 35ch12+View
SL06G062580Beta-galactosidase (AHRD V1 ***- B2LYJ3_PETHY)%3B contains Interpro domain(s) IPR001944 Glycoside hydrolase%2C family 35ch06+View
SL12G008840Beta-galactosidase (AHRD V1 ***- O81100_SOLLC)%3B contains Interpro domain(s) IPR001944 Glycoside hydrolase%2C family 35ch12+View
SL03G121540Beta-galactosidase (AHRD V1 ***- Q9ZP11_SOLLC)%3B contains Interpro domain(s) IPR019801 Glycoside hydrolase%2C family 35%2C conserved site IPR001944 Glycoside hydrolase%2C family 35 IPR000922 D-galactoside/L-rhamnose binding SUEL lectinch03+View

Solanum tuberosum

Gene id Description Chromosome Strand Multiplicon
ST03G035400Beta-galactosidase (AHRD V1 ***- Q9ZP11_SOLLC); contains Interpro domain(s) IPR001944 Glycoside hydrolase, family 35chr03-View
ST12G022740Beta-galactosidase (AHRD V1 ***- Q546T5_SOLLC); contains Interpro domain(s) IPR001944 Glycoside hydrolase, family 35chr12+View
ST12G010020Beta-galactosidase (AHRD V1 ***- O81100_SOLLC); contains Interpro domain(s) IPR001944 Glycoside hydrolase, family 35chr12+View
ST06G021660Beta-galactosidase (AHRD V1 **** B2LYJ3_PETHY); contains Interpro domain(s) IPR001944 Glycoside hydrolase, family 35chr06+View

Thellungiella parvula

Gene id Description Chromosome Strand Multiplicon
TP6G18590similar to AT5G56870|BGAL4 (beta-galactosidase 4)ch6-6+View

Vitis vinifera

Gene id Description Chromosome Strand Multiplicon
VV09G03150name=GSVIVG01016849001;chr9+View

Zea mays

Gene id Description Chromosome Strand Multiplicon
ZM01G36930No description available.1-View


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Gene id
Species
Description
Chromosome
Strand