PLAZA 3.0 Dicots : colinear gene pairs

Anchorpoints

Gene id: CRU_001G28890
Organism: Capsella rubella

Paralogs (intra-species colinear regions)

No paralogous anchorpoints available

Orthologs (inter-species colinear regions)

Arabidopsis thaliana

Gene id	Description	Chromosome	Strand	Multiplicon
AT1G31970	DEA(D/H)-box RNA helicase family protein STRESS RESPONSE SUPPRESSOR 1 (STRS1); FUNCTIONS IN: helicase activity, nucleic acid binding, ATP-dependent helicase activity, ATP binding; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: RNA helicase, DEAD-box type, Q motif (InterPro:IPR014014), DNA/RNA helicase, DEAD/DEAH box type, N-terminal (InterPro:IPR011545), RNA helicase, ATP-dependent, DEAD-box, conserved site (InterPro:IPR000629), DEAD-like helicase, N-terminal (InterPro:IPR014001), DNA/RNA helicase, C-terminal (InterPro:IPR001650), Helicase, superfamily 1/2, ATP-binding domain (InterPro:IPR014021); BEST Arabidopsis thaliana protein match is: P-loop containing nucleoside triphosphate hydrolases superfamily protein (TAIR:AT5G63120.2); Has 53114 Blast hits to 49629 proteins in 3238 species: Archae - 911; Bacteria - 25415; Metazoa - 8113; Fungi - 5284; Plants - 3075; Viruses - 103; Other Eukaryotes - 10213 (source: NCBI BLink).	1	+	View

Brassica rapa

Gene id	Description	Chromosome	Strand	Multiplicon
BR08G08760	No description available.	A08	-	View
BR09G26920	No description available.	A09	-	View

Beta vulgaris

Gene id	Description	Chromosome	Strand	Multiplicon
BV5G18530	No description available.	Bvchr5.sca008	+	View

Citrus sinensis

Gene id	Description	Chromosome	Strand	Multiplicon
CS00073G00060	No description available.	scaffold00073	-	View

Eucalyptus grandis

Gene id	Description	Chromosome	Strand	Multiplicon
EG0004G21930	No description available.	scaffold_4	+	View

Fragaria vesca

Gene id	Description	Chromosome	Strand	Multiplicon
FV0G29120	DEAD-box ATP-dependent RNA helicase 5 (similar to)	scf0513178	+	View

Glycine max

Gene id	Description	Chromosome	Strand	Multiplicon
GM01G01390	No description available.	Gm01	+	View
GM09G34390	No description available.	Gm09	-	View

Gossypium raimondii

Gene id	Description	Chromosome	Strand	Multiplicon
GR03G18640	No description available.	Chr03	-	View

Medicago truncatula

Gene id	Description	Chromosome	Strand	Multiplicon
MT5G027840	DEAD-box ATP-dependent RNA helicase	chr5	-	View

Prunus persica

Gene id	Description	Chromosome	Strand	Multiplicon
PPE_005G02770	No description available.	scaffold_5	+	View

Populus trichocarpa

Gene id	Description	Chromosome	Strand	Multiplicon
PT03G09880	No description available.	Chr03	-	View

Ricinus communis

Gene id	Description	Chromosome	Strand	Multiplicon
RC30068G01560	No description available.	30068	-	View

Solanum lycopersicum

Gene id	Description	Chromosome	Strand	Multiplicon
SL08G076200	ATP dependent RNA helicase (AHRD V1 ***- B3LHE4_YEAS1)%3B contains Interpro domain(s) IPR011545 DNA/RNA helicase%2C DEAD/DEAH box type%2C N-terminal	ch08	-	View

Solanum tuberosum

Gene id	Description	Chromosome	Strand	Multiplicon
ST08G022150	ATP dependent RNA helicase (AHRD V1 ***- B3LHE4_YEAS1); contains Interpro domain(s) IPR011545 DNA/RNA helicase, DEAD/DEAH box type, N-terminal	chr08	+	View

Theobroma cacao

Gene id	Description	Chromosome	Strand	Multiplicon
TC0003G30810	No description available.	scaffold_3	-	View

Thellungiella parvula

Gene id	Description	Chromosome	Strand	Multiplicon
TP1G27680	similar to AT1G31970\|STRS1 (STRESS RESPONSE SUPPRESSOR 1)	ch1-1	+	View