Anchorpoints

Gene id
CRU_001G16210
Organism
Capsella rubella

Paralogs (intra-species colinear regions)

No paralogous anchorpoints available


Orthologs (inter-species colinear regions)

Arabidopsis lyrata

Gene id Description Chromosome Strand Multiplicon
AL1G18100No description available.scaffold_1+View

Arabidopsis thaliana

Gene id Description Chromosome Strand Multiplicon
AT1G17220fu-gaeri1 (FUG1); FUNCTIONS IN: translation initiation factor activity; INVOLVED IN: translational initiation; LOCATED IN: chloroplast, chloroplast envelope; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Translation initiation factor IF-2, N-terminal (InterPro:IPR006847), Small GTP-binding protein (InterPro:IPR005225), Translation elongation factor EFTu/EF1A, domain 2 (InterPro:IPR004161), Translation initiation factor 2 related (InterPro:IPR015760), Initiation factor 2 (InterPro:IPR000178), Protein synthesis factor, GTP-binding (InterPro:IPR000795), Translation elongation/initiation factor/Ribosomal, beta-barrel (InterPro:IPR009000); BEST Arabidopsis thaliana protein match is: Translation initiation factor 2, small GTP-binding protein (TAIR:AT4G11160.1); Has 64472 Blast hits to 64325 proteins in 4737 species: Archae - 1215; Bacteria - 42273; Metazoa - 2198; Fungi - 2344; Plants - 1110; Viruses - 4; Other Eukaryotes - 15328 (source: NCBI BLink). Translation initiation factor 2, small GTP-binding protein Encodes a chloroplast localized protein with similarity to translation initiation factor 2. Can complement loss of INFB in E.coli suggesting FUG1 does function as a translation initiation factor in vivo. Identified as a suppressor of the leaf variegation mutant var2-6. Suppression is only seen in hypomorphs as complete loss of function alleles are embryo lethal.1+View

Brassica rapa

Gene id Description Chromosome Strand Multiplicon
BR06G12270No description available.A06+View
BR08G26600No description available.A08-View

Eucalyptus grandis

Gene id Description Chromosome Strand Multiplicon
EG0006G11370No description available.scaffold_6-View

Solanum lycopersicum

Gene id Description Chromosome Strand Multiplicon
SL07G056020Translation initiation factor IF-2 (AHRD V1 **** A5B2X2_VITVI)%3B contains Interpro domain(s) IPR000178 Initiation factor 2ch07-View

Thellungiella parvula

Gene id Description Chromosome Strand Multiplicon
TP1G15360similar to AT1G17220|FUG1 (fu-gaeri1)ch1-1+View


Download

Gene id
Species
Description
Chromosome
Strand