Expansion plot
Gene family finder
Ks-graphs
Skyline plot
Synteny plot
WGDotplot
Functional clusters
WGMapping
BLAST
WorkbenchAnchorpoints
- Gene id
- CRU_001G11360
- Organism
- Capsella rubella
Paralogs (intra-species colinear regions)
| Gene id | Description | Chromosome | Strand | Multiplicon |
|---|---|---|---|---|
| CRU_002G02220 | No description available. | scaffold_2 | - | View |
Orthologs (inter-species colinear regions)
Arabidopsis lyrata
| Gene id | Description | Chromosome | Strand | Multiplicon |
|---|---|---|---|---|
| AL1G12580 | No description available. | scaffold_1 | + | View |
| AL2G02860 | No description available. | scaffold_2 | - | View |
Arabidopsis thaliana
| Gene id | Description | Chromosome | Strand | Multiplicon |
|---|---|---|---|---|
| AT1G12210 | RPS5-like 1 RFL1 has high sequence similarity to the adjacent disease resistance (R) gene RPS5. RPS5-like 1 (RFL1); FUNCTIONS IN: ATP binding; INVOLVED IN: N-terminal protein myristoylation, response to bacterium, defense response; LOCATED IN: cellular_component unknown; EXPRESSED IN: shoot apex, stem, embryo, sepal, stamen; EXPRESSED DURING: 4 anthesis, petal differentiation and expansion stage, D bilateral stage; CONTAINS InterPro DOMAIN/s: NB-ARC (InterPro:IPR002182), Disease resistance protein (InterPro:IPR000767); BEST Arabidopsis thaliana protein match is: Disease resistance protein (CC-NBS-LRR class) family (TAIR:AT1G12220.2); Has 18050 Blast hits to 15832 proteins in 638 species: Archae - 19; Bacteria - 1098; Metazoa - 2850; Fungi - 219; Plants - 13503; Viruses - 0; Other Eukaryotes - 361 (source: NCBI BLink). | 1 | + | View |
| AT1G62630 | Disease resistance protein (CC-NBS-LRR class) family Disease resistance protein (CC-NBS-LRR class) family; FUNCTIONS IN: ATP binding; INVOLVED IN: N-terminal protein myristoylation, defense response; LOCATED IN: cellular_component unknown; CONTAINS InterPro DOMAIN/s: NB-ARC (InterPro:IPR002182), Disease resistance protein (InterPro:IPR000767); BEST Arabidopsis thaliana protein match is: Disease resistance protein (CC-NBS-LRR class) family (TAIR:AT1G63360.1); Has 16042 Blast hits to 14596 proteins in 629 species: Archae - 18; Bacteria - 843; Metazoa - 2230; Fungi - 170; Plants - 12480; Viruses - 6; Other Eukaryotes - 295 (source: NCBI BLink). | 1 | + | View |
Brassica rapa
| Gene id | Description | Chromosome | Strand | Multiplicon |
|---|---|---|---|---|
| BR06G08600 | No description available. | A06 | + | View |
| BR09G49700 | No description available. | A09 | + | View |
| BR08G28290 | No description available. | A08 | + | View |
Medicago truncatula
| Gene id | Description | Chromosome | Strand | Multiplicon |
|---|---|---|---|---|
| MT1G006975 | disease resistance protein (CC-NBS-LRR class) family protein | chr1 | + | View |
Solanum lycopersicum
| Gene id | Description | Chromosome | Strand | Multiplicon |
|---|---|---|---|---|
| SL08G007250 | Cc-nbs-lrr%2C resistance protein | ch08 | - | View |
Thellungiella parvula
| Gene id | Description | Chromosome | Strand | Multiplicon |
|---|---|---|---|---|
| TP1G10900 | similar to AT1G12290|disease resistance protein (CC-NBS-LRR class), putative | ch1-1 | - | View |