Anchorpoints

Gene id
CM00022G03920
Organism
Cucumis melo

Paralogs (intra-species colinear regions)

No paralogous anchorpoints available


Orthologs (inter-species colinear regions)

Arabidopsis lyrata

Gene id Description Chromosome Strand Multiplicon
AL6G12230No description available.scaffold_6-View

Arabidopsis thaliana

Gene id Description Chromosome Strand Multiplicon
AT5G12330LATERAL ROOT PRIMORDIUM 1 (LRP1); FUNCTIONS IN: protein homodimerization activity; INVOLVED IN: response to auxin stimulus, root development; LOCATED IN: cellular_component unknown; EXPRESSED IN: 15 plant structures; EXPRESSED DURING: 7 growth stages; CONTAINS InterPro DOMAIN/s: Lateral Root Primordium type 1, C-terminal (InterPro:IPR006511), Protein of unknown function DUF702 (InterPro:IPR007818), Zinc finger, Lateral Root Primordium type 1 (InterPro:IPR006510); BEST Arabidopsis thaliana protein match is: SHI-related sequence 7 (TAIR:AT1G19790.2). A member of SHI gene family. Arabidopsis thaliana has ten members that encode proteins with a RING finger-like zinc finger motif. Despite being highly divergent in sequence, many of the SHI-related genes are partially redundant in function and synergistically promote gynoecium, stamen and leaf development in Arabidopsis. Expressed in lateral root primordia and induced by auxin. SWP1 is involved in the repression of LRP1 via histone deacetylation. Lateral root primordium (LRP) protein-related5-View

Brassica rapa

Gene id Description Chromosome Strand Multiplicon
BR10G21640No description available.A10+View

Beta vulgaris

Gene id Description Chromosome Strand Multiplicon
BV4G13770No description available.Bvchr4.sca001+View

Citrullus lanatus

Gene id Description Chromosome Strand Multiplicon
CL02G22950No description available.Chr2-View

Capsella rubella

Gene id Description Chromosome Strand Multiplicon
CRU_006G10540No description available.scaffold_6-View

Citrus sinensis

Gene id Description Chromosome Strand Multiplicon
CS00120G00330No description available.scaffold00120-View

Eucalyptus grandis

Gene id Description Chromosome Strand Multiplicon
EG0010G06130No description available.scaffold_10-View

Fragaria vesca

Gene id Description Chromosome Strand Multiplicon
FV2G47930tRNA-dihydrouridine synthase 1-like (probable)LG2-View

Glycine max

Gene id Description Chromosome Strand Multiplicon
GM14G03900No description available.Gm14+View
GM02G44860No description available.Gm02-View

Gossypium raimondii

Gene id Description Chromosome Strand Multiplicon
GR06G12390No description available.Chr06+View
GR11G21540No description available.Chr11+View

Medicago truncatula

Gene id Description Chromosome Strand Multiplicon
MT5G089750lateral root primordium (LRP)-like proteinchr5-View

Populus trichocarpa

Gene id Description Chromosome Strand Multiplicon
PT09G07080No description available.Chr09-View
PT01G27620No description available.Chr01-View

Solanum lycopersicum

Gene id Description Chromosome Strand Multiplicon
SL11G064800Stylish (AHRD V1 *--- D2KC71_BRARP)%3B contains Interpro domain(s) IPR007818 Protein of unknown function DUF702ch11-View

Solanum tuberosum

Gene id Description Chromosome Strand Multiplicon
ST11G020820Short internode related sequence 7 (AHRD V1 *--- D2KC77_BRARP); contains Interpro domain(s) IPR007818 Protein of unknown function DUF702chr11+View

Theobroma cacao

Gene id Description Chromosome Strand Multiplicon
TC0009G24610No description available.scaffold_9-View

Thellungiella parvula

Gene id Description Chromosome Strand Multiplicon
TP6G31310similar to AT5G12330|LRP1 (LATERAL ROOT PRIMORDIUM 1)ch6-6+View

Vitis vinifera

Gene id Description Chromosome Strand Multiplicon
VV06G10830name=GSVIVG01037267001;chr6-View


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Description
Chromosome
Strand