Anchorpoints
- Gene id
- CL10G19520
- Organism
- Citrullus lanatus
Paralogs (intra-species colinear regions)
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
CL11G00830 | No description available. | Chr11 | - | View |
CL04G07610 | No description available. | Chr4 | + | View |
Orthologs (inter-species colinear regions)
Arabidopsis lyrata
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
AL5G25840 | No description available. | scaffold_5 | - | View |
AL6G01130 | No description available. | scaffold_6 | + | View |
AL6G05540 | No description available. | scaffold_6 | + | View |
Arabidopsis thaliana
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
AT3G55660 | ROP (rho of plants) guanine nucleotide exchange factor 6 ROP (rho of plants) guanine nucleotide exchange factor 6 (ROPGEF6); FUNCTIONS IN: Rho guanyl-nucleotide exchange factor activity; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 16 plant structures; EXPRESSED DURING: 9 growth stages; CONTAINS InterPro DOMAIN/s: Rop nucleotide exchanger, PRONE (InterPro:IPR005512); BEST Arabidopsis thaliana protein match is: ROP guanine nucleotide exchange factor 5 (TAIR:AT5G05940.1); Has 306 Blast hits to 304 proteins in 17 species: Archae - 0; Bacteria - 2; Metazoa - 0; Fungi - 0; Plants - 304; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). Encodes a member of KPP-like gene family, homolog of KPP (kinase partner protein) gene in tomato. Also a member of the RopGEF (guanine nucleotide exchange factor) family, containing the novel PRONE domain (plant-specific Rop nucleotide exchanger), which is exclusively active towards members of the Rop subfamily. | 3 | - | View |
AT5G05940 | ROP guanine nucleotide exchange factor 5 Encodes a member of KPP-like gene family, homolog of KPP (kinase partner protein) gene in tomato. Also a member of the RopGEF (guanine nucleotide exchange factor) family, containing the novel PRONE domain (plant-specific Rop nucleotide exchanger), which is exclusively active towards members of the Rop subfamily. ROP guanine nucleotide exchange factor 5 (ROPGEF5); CONTAINS InterPro DOMAIN/s: Rop nucleotide exchanger, PRONE (InterPro:IPR005512); BEST Arabidopsis thaliana protein match is: RHO guanyl-nucleotide exchange factor 7 (TAIR:AT5G02010.1); Has 303 Blast hits to 301 proteins in 15 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 303; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). | 5 | + | View |
AT5G02010 | RHO guanyl-nucleotide exchange factor 7 (ROPGEF7); CONTAINS InterPro DOMAIN/s: Rop nucleotide exchanger, PRONE (InterPro:IPR005512); BEST Arabidopsis thaliana protein match is: ROP guanine nucleotide exchange factor 5 (TAIR:AT5G05940.1); Has 310 Blast hits to 307 proteins in 17 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 308; Viruses - 0; Other Eukaryotes - 2 (source: NCBI BLink). RHO guanyl-nucleotide exchange factor 7 Encodes a member of KPP-like gene family, homolog of KPP (kinase partner protein) gene in tomato. Also a member of the RopGEF (guanine nucleotide exchange factor) family, containing the novel PRONE domain (plant-specific Rop nucleotide exchanger), which is exclusively active towards members of the Rop subfamily. | 5 | + | View |
Brassica rapa
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
BR10G24180 | No description available. | A10 | + | View |
Beta vulgaris
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
BV2G06100 | No description available. | Bvchr2.sca001 | - | View |
Cucumis melo
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
CM00002G01300 | No description available. | CM3.5_scaffold00002 | - | View |
CM00008G02010 | No description available. | CM3.5_scaffold00008 | - | View |
CM00011G01360 | No description available. | CM3.5_scaffold00011 | + | View |
Carica papaya
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
CP00019G02490 | No description available. | supercontig_19 | + | View |
CP00056G00480 | No description available. | supercontig_56 | - | View |
Capsella rubella
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
CRU_006G00820 | No description available. | scaffold_6 | + | View |
CRU_006G04700 | No description available. | scaffold_6 | + | View |
Citrus sinensis
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
CS00083G00270 | No description available. | scaffold00083 | - | View |
Eucalyptus grandis
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
EG0007G23850 | No description available. | scaffold_7 | - | View |
EG0002G22290 | No description available. | scaffold_2 | - | View |
Fragaria vesca
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
FV6G11920 | Rop guanine nucleotide exchange factor 1 (RopGEF1) (similar to) | LG6 | + | View |
FV7G28470 | Rop guanine nucleotide exchange factor 1 (RopGEF1) (similar to) | LG7 | - | View |
Glycine max
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
GM11G34690 | No description available. | Gm11 | - | View |
GM14G06930 | No description available. | Gm14 | + | View |
GM01G26010 | No description available. | Gm01 | - | View |
GM18G41330 | No description available. | Gm18 | - | View |
GM02G41980 | No description available. | Gm02 | - | View |
GM03G16610 | No description available. | Gm03 | + | View |
GM07G16790 | No description available. | Gm07 | - | View |
GM18G03610 | No description available. | Gm18 | + | View |
Gossypium raimondii
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
GR06G17830 | No description available. | Chr06 | - | View |
GR11G27430 | No description available. | Chr11 | - | View |
GR12G10870 | No description available. | Chr12 | - | View |
GR02G25890 | No description available. | Chr02 | - | View |
Malus domestica
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
MD01G013000 | No description available. | 1 | - | View |
MD04G011050 | No description available. | 4 | - | View |
MD12G016310 | No description available. | 12 | - | View |
Manihot esculenta
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
ME08265G02670 | No description available. | scaffold08265 | - | View |
Medicago truncatula
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
MT4G019770 | RHO guanyl-nucleotide exchange factor | chr4 | - | View |
MT7G065220 | RHO guanyl-nucleotide exchange factor | chr7 | - | View |
MT5G081410 | RHO guanyl-nucleotide exchange factor | chr5 | - | View |
Oryza sativa ssp. japonica
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
OS01G62990 | ATROPGEF7%2FROPGEF7, putative, expressed | 1 | - | View |
OS05G38000 | ATROPGEF7%2FROPGEF7, putative, expressed | 5 | + | View |
Prunus persica
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
PPE_006G27210 | No description available. | scaffold_6 | - | View |
PPE_002G23360 | No description available. | scaffold_2 | - | View |
Populus trichocarpa
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
PT16G10440 | No description available. | Chr16 | - | View |
PT06G09260 | No description available. | Chr06 | - | View |
PT08G06200 | No description available. | Chr08 | - | View |
PT10G19600 | No description available. | Chr10 | + | View |
Ricinus communis
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
RC30143G00590 | No description available. | 30143 | - | View |
Solanum lycopersicum
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
SL09G011480 | Rop guanine nucleotide exchange factor 1 (AHRD V1 ***- ROGF1_ARATH)%3B contains Interpro domain(s) IPR005512 Rop nucleotide exchanger%2C PRONE | ch09 | - | View |
SL10G086660 | Rop guanine nucleotide exchange factor 1 (AHRD V1 ***- ROGF1_ARATH)%3B contains Interpro domain(s) IPR005512 Rop nucleotide exchanger%2C PRONE | ch10 | - | View |
Solanum tuberosum
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
ST10G027890 | Rop guanine nucleotide exchange factor (AHRD V1 *--- E5GCE7_CUCME); contains Interpro domain(s) IPR005512 Rop nucleotide exchanger, PRONE | chr10 | + | View |
Theobroma cacao
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
TC0005G02760 | No description available. | scaffold_5 | + | View |
TC0010G02870 | No description available. | scaffold_10r | + | View |
Thellungiella parvula
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
TP6G36960 | similar to AT5G05940|ROPGEF5 (ROP GUANINE NUCLEOTIDE EXCHANGE FACTOR 5) | ch6-6 | - | View |
TP6G40430 | similar to AT5G02010|ROPGEF7 | ch6-6 | - | View |
Vitis vinifera
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
VV08G13710 | name=GSVIVG01034063001; | chr8 | - | View |
VV13G04380 | name=GSVIVG01016434001; | chr13 | - | View |
Zea mays
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
ZM08G14270 | No description available. | 8 | - | View |
ZM03G26900 | No description available. | 3 | + | View |