Gene: AT5G05940 (Arabidopsis thaliana)

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Gene Identifier
AT5G05940
Transcript Identifier
AT5G05940.1
Gene Type
Coding gene
Location
5 : 1786028-1788363 : positive

Family

Gene family
HOM03D000314
(371 genes in 30 species)
specific family
Subfamily
ORTHO03D001190
(55 genes in 22 species)
specific family
Duplication type
Block duplicate

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Descriptions

Description
ROP guanine nucleotide exchange factor 5
Curated Summary
Encodes a member of KPP-like gene family, homolog of KPP (kinase partner protein) gene in tomato. Also a member of the RopGEF (guanine nucleotide exchange factor) family, containing the novel PRONE domain (plant-specific Rop nucleotide exchanger), which is exclusively active towards members of the Rop subfamily.
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Identifiers

Identifier Name
aliasATROPGEF5
aliasROPGEF5
aliasROP (rho of plants) guanine nucleotide exchange factor 5
aliasROP GUANINE NUCLEOTIDE EXCHANGE FACTOR 5
uniprotF4K295

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Biological Process

GO termEvidence(s)ProviderDescriptionSource
GO:0010089RCAGene Ontologyxylem development1
GO:0044036RCAGene Ontologycell wall macromolecule metabolic process1

Molecular Function

GO termEvidence(s)ProviderDescriptionSource
GO:0005089ISS, IEA, UniProtRho guanyl-nucleotide exchange factor activity1 2 3 4
GO:0005085IEAPLAZA Homologyguanyl-nucleotide exchange factor activityHOM03D000314
GO:0005088IEAPLAZA HomologyRas guanyl-nucleotide exchange factor activityHOM03D000314

Cellular Component

GO termEvidence(s)ProviderDescriptionSource
GO:0005634ISMGene Ontologynucleus1
GO:0005886ISOPLAZA Tree-based Orthologyplasma membraneAT5G02010
GO:0005829ISOPLAZA Tree-based OrthologycytosolAT5G02010

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Experimental Evidence
Electronic Evidence
Computational Reviewed Evidence
GO Sources:   Primary     Orthology     Homology  
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InterPro Description
IPR005512PRONE domain

Mapman id Description
30.5signalling.G-proteins
No SignalP domains detected for this gene.