Expansion plot
Gene family finder
Ks-graphs
Skyline plot
Synteny plot
WGDotplot
Functional clusters
WGMapping
BLAST
WorkbenchAnchorpoints
- Gene id
- BR08G22990
- Organism
- Brassica rapa
Paralogs (intra-species colinear regions)
| Gene id | Description | Chromosome | Strand | Multiplicon |
|---|---|---|---|---|
| BR02G19440 | No description available. | A02 | + | View |
| BR02G29820 | No description available. | A02 | - | View |
| BR09G29620 | No description available. | A09 | - | View |
Orthologs (inter-species colinear regions)
Arabidopsis lyrata
| Gene id | Description | Chromosome | Strand | Multiplicon |
|---|---|---|---|---|
| AL1G27610 | No description available. | scaffold_1 | + | View |
Arabidopsis thaliana
| Gene id | Description | Chromosome | Strand | Multiplicon |
|---|---|---|---|---|
| AT1G25560 | TEMPRANILLO 1 (TEM1); FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: photoperiodism, flowering, ethylene mediated signaling pathway; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: DNA-binding, integrase-type (InterPro:IPR016177), Transcriptional factor B3 (InterPro:IPR003340), Pathogenesis-related transcriptional factor/ERF, DNA-binding (InterPro:IPR001471); BEST Arabidopsis thaliana protein match is: related to ABI3/VP1 2 (TAIR:AT1G68840.2); Has 6413 Blast hits to 6197 proteins in 270 species: Archae - 0; Bacteria - 3; Metazoa - 0; Fungi - 0; Plants - 6380; Viruses - 0; Other Eukaryotes - 30 (source: NCBI BLink). Encodes a member of the RAV transcription factor family that contains AP2 and B3 binding domains. Involved in the regulation of flowering under long days. Loss of function results in early flowering. Overexpression causes late flowering and repression of expression of FT. Novel transcriptional regulator involved in ethylene signaling. Promoter bound by EIN3. EDF1 in turn, binds to promoter elements in ethylene responsive genes. AP2/B3 transcription factor family protein | 1 | - | View |
Citrullus lanatus
| Gene id | Description | Chromosome | Strand | Multiplicon |
|---|---|---|---|---|
| CL05G24070 | No description available. | Chr5 | - | View |
Cucumis melo
| Gene id | Description | Chromosome | Strand | Multiplicon |
|---|---|---|---|---|
| CM00016G05520 | No description available. | CM3.5_scaffold00016 | + | View |
Capsella rubella
| Gene id | Description | Chromosome | Strand | Multiplicon |
|---|---|---|---|---|
| CRU_001G23920 | No description available. | scaffold_1 | + | View |
Citrus sinensis
| Gene id | Description | Chromosome | Strand | Multiplicon |
|---|---|---|---|---|
| CS00019G00710 | No description available. | scaffold00019 | - | View |
Eucalyptus grandis
| Gene id | Description | Chromosome | Strand | Multiplicon |
|---|---|---|---|---|
| EG0007G17900 | No description available. | scaffold_7 | - | View |
| EG0002G24950 | No description available. | scaffold_2 | - | View |
Fragaria vesca
| Gene id | Description | Chromosome | Strand | Multiplicon |
|---|---|---|---|---|
| FV0G02370 | AP2/ERF and B3 domain-containing transcription repressor TEM1 (putative) | scf0513158 | - | View |
Glycine max
| Gene id | Description | Chromosome | Strand | Multiplicon |
|---|---|---|---|---|
| GM01G22260 | No description available. | Gm01 | - | View |
| GM02G11060 | No description available. | Gm02 | - | View |
Gossypium raimondii
| Gene id | Description | Chromosome | Strand | Multiplicon |
|---|---|---|---|---|
| GR08G18590 | No description available. | Chr08 | - | View |
| GR13G08000 | No description available. | Chr13 | + | View |
Malus domestica
| Gene id | Description | Chromosome | Strand | Multiplicon |
|---|---|---|---|---|
| MD16G002000 | No description available. | 16 | - | View |
Manihot esculenta
| Gene id | Description | Chromosome | Strand | Multiplicon |
|---|---|---|---|---|
| ME06656G00020 | No description available. | scaffold06656 | - | View |
| ME08359G00500 | No description available. | scaffold08359 | - | View |
Prunus persica
| Gene id | Description | Chromosome | Strand | Multiplicon |
|---|---|---|---|---|
| PPE_001G31590 | No description available. | scaffold_1 | + | View |
Populus trichocarpa
| Gene id | Description | Chromosome | Strand | Multiplicon |
|---|---|---|---|---|
| PT10G12920 | No description available. | Chr10 | - | View |
Solanum lycopersicum
| Gene id | Description | Chromosome | Strand | Multiplicon |
|---|---|---|---|---|
| SL05G009790 | Transcription factor (AHRD V1 *-** D6MKM9_9ASPA)%3B contains Interpro domain(s) IPR003340 Transcriptional factor B3 | ch05 | - | View |
Solanum tuberosum
| Gene id | Description | Chromosome | Strand | Multiplicon |
|---|---|---|---|---|
| ST05G007520 | Ethylene-responsive transcription factor 4 (AHRD V1 *-** ERF78_ARATH); contains Interpro domain(s) IPR003340 Transcriptional factor B3 | chr05 | + | View |
Theobroma cacao
| Gene id | Description | Chromosome | Strand | Multiplicon |
|---|---|---|---|---|
| TC0002G35830 | No description available. | scaffold_2 | - | View |
Thellungiella parvula
| Gene id | Description | Chromosome | Strand | Multiplicon |
|---|---|---|---|---|
| TP2G14980 | similar to AT3G25730|AP2 domain-containing transcription factor, putative | ch2-4 | + | View |
| TP1G22650 | similar to AT1G25560|TEM1 (TEMPRANILLO 1) | ch1-1 | + | View |
Vitis vinifera
| Gene id | Description | Chromosome | Strand | Multiplicon |
|---|---|---|---|---|
| VV01G08180 | name=GSVIVG01011947001; | chr1 | + | View |