Expansion plot
Gene family finder
Ks-graphs
Skyline plot
Synteny plot
WGDotplot
Functional clusters
WGMapping
BLAST
WorkbenchAnchorpoints
- Gene id
- AT5G27540
- Organism
- Arabidopsis thaliana
Paralogs (intra-species colinear regions)
| Gene id | Description | Chromosome | Strand | Multiplicon |
|---|---|---|---|---|
| AT3G05310 | MIRO-related GTP-ase 3 Encodes a protein with similarity to MIRO GTPases. MIRO-related GTP-ase 3 (MIRO3); FUNCTIONS IN: GTP binding; INVOLVED IN: mitochondrion transport along microtubule, small GTPase mediated signal transduction; LOCATED IN: mitochondrial outer membrane, intracellular; EXPRESSED IN: central cell; CONTAINS InterPro DOMAIN/s: EF-Hand 1, calcium-binding site (InterPro:IPR018247), EF hand associated, type-1 (InterPro:IPR013566), Mitochondrial Rho-like (InterPro:IPR013684), EF hand associated, type-2 (InterPro:IPR013567), Mitochondrial Rho GTPase (InterPro:IPR021181), EF-HAND 2 (InterPro:IPR018249), MIRO (InterPro:IPR020860); BEST Arabidopsis thaliana protein match is: MIRO-related GTP-ase 1 (TAIR:AT5G27540.2); Has 1943 Blast hits to 1932 proteins in 256 species: Archae - 0; Bacteria - 18; Metazoa - 950; Fungi - 261; Plants - 517; Viruses - 0; Other Eukaryotes - 197 (source: NCBI BLink). | 3 | + | View |
Orthologs (inter-species colinear regions)
Arabidopsis lyrata
| Gene id | Description | Chromosome | Strand | Multiplicon |
|---|---|---|---|---|
| AL6G27720 | No description available. | scaffold_6 | - | View |
| AL3G05150 | No description available. | scaffold_3 | + | View |
Brassica rapa
| Gene id | Description | Chromosome | Strand | Multiplicon |
|---|---|---|---|---|
| BR09G03990 | No description available. | A09 | - | View |
| BR02G35970 | No description available. | A02 | + | View |
| BR06G27660 | No description available. | A06 | - | View |
| BR00G06000 | No description available. | Scaffold000229 | + | View |
Beta vulgaris
| Gene id | Description | Chromosome | Strand | Multiplicon |
|---|---|---|---|---|
| BV4G04120 | No description available. | Bvchr4.sca004 | - | View |
Carica papaya
| Gene id | Description | Chromosome | Strand | Multiplicon |
|---|---|---|---|---|
| CP00048G00430 | No description available. | supercontig_48 | + | View |
Capsella rubella
| Gene id | Description | Chromosome | Strand | Multiplicon |
|---|---|---|---|---|
| CRU_003G04400 | No description available. | scaffold_3 | + | View |
| CRU_006G24260 | No description available. | scaffold_6 | - | View |
Citrus sinensis
| Gene id | Description | Chromosome | Strand | Multiplicon |
|---|---|---|---|---|
| CS00103G00710 | No description available. | scaffold00103 | + | View |
Eucalyptus grandis
| Gene id | Description | Chromosome | Strand | Multiplicon |
|---|---|---|---|---|
| EG0002G15770 | No description available. | scaffold_2 | - | View |
Fragaria vesca
| Gene id | Description | Chromosome | Strand | Multiplicon |
|---|---|---|---|---|
| FV6G05830 | Mitochondrial Rho GTPase 1 (probable) | LG6 | - | View |
Glycine max
| Gene id | Description | Chromosome | Strand | Multiplicon |
|---|---|---|---|---|
| GM20G37730 | No description available. | Gm20 | + | View |
| GM10G29580 | No description available. | Gm10 | - | View |
Gossypium raimondii
| Gene id | Description | Chromosome | Strand | Multiplicon |
|---|---|---|---|---|
| GR04G24160 | No description available. | Chr04 | + | View |
| GR07G34260 | No description available. | Chr07 | - | View |
Malus domestica
| Gene id | Description | Chromosome | Strand | Multiplicon |
|---|---|---|---|---|
| MD12G022350 | No description available. | 12 | - | View |
Manihot esculenta
| Gene id | Description | Chromosome | Strand | Multiplicon |
|---|---|---|---|---|
| ME03614G04700 | No description available. | scaffold03614 | + | View |
Medicago truncatula
| Gene id | Description | Chromosome | Strand | Multiplicon |
|---|---|---|---|---|
| MT1G082870 | Rho GTPase-like protein | chr1 | + | View |
Prunus persica
| Gene id | Description | Chromosome | Strand | Multiplicon |
|---|---|---|---|---|
| PPE_006G33150 | No description available. | scaffold_6 | - | View |
Populus trichocarpa
| Gene id | Description | Chromosome | Strand | Multiplicon |
|---|---|---|---|---|
| PT13G02310 | No description available. | Chr13 | - | View |
| PT05G03370 | No description available. | Chr05 | - | View |
Ricinus communis
| Gene id | Description | Chromosome | Strand | Multiplicon |
|---|---|---|---|---|
| RC30128G01610 | No description available. | 30128 | + | View |
Solanum lycopersicum
| Gene id | Description | Chromosome | Strand | Multiplicon |
|---|---|---|---|---|
| SL01G098920 | Mitochondrial Rho GTPase 1 (AHRD V1 **** B2WA10_PYRTR)%3B contains Interpro domain(s) IPR013567 EF hand associated%2C type-2 | ch01 | + | View |
Solanum tuberosum
| Gene id | Description | Chromosome | Strand | Multiplicon |
|---|---|---|---|---|
| ST01G036620 | Mitochondrial Rho GTPase (AHRD V1 **** A6YTD0_CUCME); contains Interpro domain(s) IPR013567 EF hand associated, type-2 | chr01 | + | View |
Theobroma cacao
| Gene id | Description | Chromosome | Strand | Multiplicon |
|---|---|---|---|---|
| TC0005G30230 | No description available. | scaffold_5 | - | View |
Thellungiella parvula
| Gene id | Description | Chromosome | Strand | Multiplicon |
|---|---|---|---|---|
| TP2G20720 | similar to AT5G27540|MIRO1 (Miro-related GTP-ase 1) | ch2-4 | + | View |
| TP3G04170 | similar to AT3G05310|MIRO3 | ch3-1 | + | View |
Vitis vinifera
| Gene id | Description | Chromosome | Strand | Multiplicon |
|---|---|---|---|---|
| VV14G00350 | name=GSVIVG01000044001; | chr14 | + | View |